GCA_038039495.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGEDBLLBC_1 (original name was: gnl|Prokka|GEDBLLBC_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	64,368	76,518

gnlProkkaGEDBLLBC_8 (original name was: gnl|Prokka|GEDBLLBC_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	cyclic-lactone-autoinducer	8,364	29,069

gnlProkkaGEDBLLBC_22 (original name was: gnl|Prokka|GEDBLLBC_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	147,576	188,745

gnlProkkaGEDBLLBC_49 (original name was: gnl|Prokka|GEDBLLBC_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	terpene	136,688	157,569

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	64,368	76,518
Region 8.1	cyclic-lactone-autoinducer	8,364	29,069
Region 22.1	T3PKS	147,576	188,745
Region 34.1	terpene	136,688	157,569

No secondary metabolite regions were found in these records:: gnlProkkaGEDBLLBC_2 (original name was: gnl|Prokka|GEDBLLBC_2); gnlProkkaGEDBLLBC_3 (original name was: gnl|Prokka|GEDBLLBC_3); gnlProkkaGEDBLLBC_4 (original name was: gnl|Prokka|GEDBLLBC_4); gnlProkkaGEDBLLBC_5 (original name was: gnl|Prokka|GEDBLLBC_5); gnlProkkaGEDBLLBC_6 (original name was: gnl|Prokka|GEDBLLBC_6); gnlProkkaGEDBLLBC_7 (original name was: gnl|Prokka|GEDBLLBC_7); gnlProkkaGEDBLLBC_9 (original name was: gnl|Prokka|GEDBLLBC_9); gnlProkkaGEDBLLBC_10 (original name was: gnl|Prokka|GEDBLLBC_10); gnlProkkaGEDBLLBC_11 (original name was: gnl|Prokka|GEDBLLBC_11); gnlProkkaGEDBLLBC_12 (original name was: gnl|Prokka|GEDBLLBC_12); gnlProkkaGEDBLLBC_13 (original name was: gnl|Prokka|GEDBLLBC_13); gnlProkkaGEDBLLBC_14 (original name was: gnl|Prokka|GEDBLLBC_14); gnlProkkaGEDBLLBC_15 (original name was: gnl|Prokka|GEDBLLBC_15); gnlProkkaGEDBLLBC_16 (original name was: gnl|Prokka|GEDBLLBC_16); gnlProkkaGEDBLLBC_17 (original name was: gnl|Prokka|GEDBLLBC_17); gnlProkkaGEDBLLBC_18 (original name was: gnl|Prokka|GEDBLLBC_18); gnlProkkaGEDBLLBC_19 (original name was: gnl|Prokka|GEDBLLBC_19); gnlProkkaGEDBLLBC_20 (original name was: gnl|Prokka|GEDBLLBC_20); gnlProkkaGEDBLLBC_21 (original name was: gnl|Prokka|GEDBLLBC_21); gnlProkkaGEDBLLBC_23 (original name was: gnl|Prokka|GEDBLLBC_23); gnlProkkaGEDBLLBC_24 (original name was: gnl|Prokka|GEDBLLBC_24); gnlProkkaGEDBLLBC_25 (original name was: gnl|Prokka|GEDBLLBC_25); gnlProkkaGEDBLLBC_26 (original name was: gnl|Prokka|GEDBLLBC_26); gnlProkkaGEDBLLBC_27 (original name was: gnl|Prokka|GEDBLLBC_27); gnlProkkaGEDBLLBC_28 (original name was: gnl|Prokka|GEDBLLBC_28); gnlProkkaGEDBLLBC_29 (original name was: gnl|Prokka|GEDBLLBC_29); gnlProkkaGEDBLLBC_30 (original name was: gnl|Prokka|GEDBLLBC_30); gnlProkkaGEDBLLBC_31 (original name was: gnl|Prokka|GEDBLLBC_31); gnlProkkaGEDBLLBC_33 (original name was: gnl|Prokka|GEDBLLBC_33); gnlProkkaGEDBLLBC_42 (original name was: gnl|Prokka|GEDBLLBC_42); gnlProkkaGEDBLLBC_50 (original name was: gnl|Prokka|GEDBLLBC_50); gnlProkkaGEDBLLBC_51 (original name was: gnl|Prokka|GEDBLLBC_51); gnlProkkaGEDBLLBC_52 (original name was: gnl|Prokka|GEDBLLBC_52); gnlProkkaGEDBLLBC_53 (original name was: gnl|Prokka|GEDBLLBC_53)

Compact view

gnlProkkaGEDBLLBC_1 - Region 1 - RiPP-like

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Location: 64,368 - 76,518 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGEDBLLBC_8 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,364 - 29,069 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGEDBLLBC_22 - Region 1 - T3PKS

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Location: 147,576 - 188,745 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGEDBLLBC_49 - Region 1 - terpene

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Location: 136,688 - 157,569 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.