GCA_039566255.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHDLCPGLJ_33 (original name was: gnl|Prokka|HDLCPGLJ_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	cyclic-lactone-autoinducer	78,536	99,132

gnlProkkaHDLCPGLJ_48 (original name was: gnl|Prokka|HDLCPGLJ_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	T3PKS	1	5,759

gnlProkkaHDLCPGLJ_82 (original name was: gnl|Prokka|HDLCPGLJ_82)

Region	Type	From	To	Most similar known cluster		Similarity
Region 82.1	RiPP-like	18,098	30,248

gnlProkkaHDLCPGLJ_83 (original name was: gnl|Prokka|HDLCPGLJ_83)

Region	Type	From	To	Most similar known cluster		Similarity
Region 83.1	terpene	101,158	122,039

Region	Type	From	To	Similarity
Region 33.1	cyclic-lactone-autoinducer	78,536	99,132
Region 48.1	T3PKS	1	5,759
Region 82.1	RiPP-like	18,098	30,248
Region 83.1	terpene	101,158	122,039

No secondary metabolite regions were found in these records:: gnlProkkaHDLCPGLJ_1 (original name was: gnl|Prokka|HDLCPGLJ_1); gnlProkkaHDLCPGLJ_2 (original name was: gnl|Prokka|HDLCPGLJ_2); gnlProkkaHDLCPGLJ_3 (original name was: gnl|Prokka|HDLCPGLJ_3); gnlProkkaHDLCPGLJ_4 (original name was: gnl|Prokka|HDLCPGLJ_4); gnlProkkaHDLCPGLJ_5 (original name was: gnl|Prokka|HDLCPGLJ_5); gnlProkkaHDLCPGLJ_6 (original name was: gnl|Prokka|HDLCPGLJ_6); gnlProkkaHDLCPGLJ_7 (original name was: gnl|Prokka|HDLCPGLJ_7); gnlProkkaHDLCPGLJ_8 (original name was: gnl|Prokka|HDLCPGLJ_8); gnlProkkaHDLCPGLJ_9 (original name was: gnl|Prokka|HDLCPGLJ_9); gnlProkkaHDLCPGLJ_10 (original name was: gnl|Prokka|HDLCPGLJ_10); gnlProkkaHDLCPGLJ_11 (original name was: gnl|Prokka|HDLCPGLJ_11); gnlProkkaHDLCPGLJ_12 (original name was: gnl|Prokka|HDLCPGLJ_12); gnlProkkaHDLCPGLJ_13 (original name was: gnl|Prokka|HDLCPGLJ_13); gnlProkkaHDLCPGLJ_14 (original name was: gnl|Prokka|HDLCPGLJ_14); gnlProkkaHDLCPGLJ_15 (original name was: gnl|Prokka|HDLCPGLJ_15); gnlProkkaHDLCPGLJ_16 (original name was: gnl|Prokka|HDLCPGLJ_16); gnlProkkaHDLCPGLJ_17 (original name was: gnl|Prokka|HDLCPGLJ_17); gnlProkkaHDLCPGLJ_18 (original name was: gnl|Prokka|HDLCPGLJ_18); gnlProkkaHDLCPGLJ_19 (original name was: gnl|Prokka|HDLCPGLJ_19); gnlProkkaHDLCPGLJ_20 (original name was: gnl|Prokka|HDLCPGLJ_20); gnlProkkaHDLCPGLJ_21 (original name was: gnl|Prokka|HDLCPGLJ_21); gnlProkkaHDLCPGLJ_22 (original name was: gnl|Prokka|HDLCPGLJ_22); gnlProkkaHDLCPGLJ_23 (original name was: gnl|Prokka|HDLCPGLJ_23); gnlProkkaHDLCPGLJ_24 (original name was: gnl|Prokka|HDLCPGLJ_24); gnlProkkaHDLCPGLJ_25 (original name was: gnl|Prokka|HDLCPGLJ_25); gnlProkkaHDLCPGLJ_26 (original name was: gnl|Prokka|HDLCPGLJ_26); gnlProkkaHDLCPGLJ_27 (original name was: gnl|Prokka|HDLCPGLJ_27); gnlProkkaHDLCPGLJ_28 (original name was: gnl|Prokka|HDLCPGLJ_28); gnlProkkaHDLCPGLJ_29 (original name was: gnl|Prokka|HDLCPGLJ_29); gnlProkkaHDLCPGLJ_30 (original name was: gnl|Prokka|HDLCPGLJ_30); gnlProkkaHDLCPGLJ_31 (original name was: gnl|Prokka|HDLCPGLJ_31); gnlProkkaHDLCPGLJ_32 (original name was: gnl|Prokka|HDLCPGLJ_32); gnlProkkaHDLCPGLJ_34 (original name was: gnl|Prokka|HDLCPGLJ_34); gnlProkkaHDLCPGLJ_35 (original name was: gnl|Prokka|HDLCPGLJ_35); gnlProkkaHDLCPGLJ_36 (original name was: gnl|Prokka|HDLCPGLJ_36); gnlProkkaHDLCPGLJ_37 (original name was: gnl|Prokka|HDLCPGLJ_37); gnlProkkaHDLCPGLJ_38 (original name was: gnl|Prokka|HDLCPGLJ_38); gnlProkkaHDLCPGLJ_39 (original name was: gnl|Prokka|HDLCPGLJ_39); gnlProkkaHDLCPGLJ_40 (original name was: gnl|Prokka|HDLCPGLJ_40); gnlProkkaHDLCPGLJ_41 (original name was: gnl|Prokka|HDLCPGLJ_41); gnlProkkaHDLCPGLJ_42 (original name was: gnl|Prokka|HDLCPGLJ_42); gnlProkkaHDLCPGLJ_43 (original name was: gnl|Prokka|HDLCPGLJ_43); gnlProkkaHDLCPGLJ_44 (original name was: gnl|Prokka|HDLCPGLJ_44); gnlProkkaHDLCPGLJ_45 (original name was: gnl|Prokka|HDLCPGLJ_45); gnlProkkaHDLCPGLJ_46 (original name was: gnl|Prokka|HDLCPGLJ_46); gnlProkkaHDLCPGLJ_47 (original name was: gnl|Prokka|HDLCPGLJ_47); gnlProkkaHDLCPGLJ_49 (original name was: gnl|Prokka|HDLCPGLJ_49); gnlProkkaHDLCPGLJ_50 (original name was: gnl|Prokka|HDLCPGLJ_50); gnlProkkaHDLCPGLJ_51 (original name was: gnl|Prokka|HDLCPGLJ_51); gnlProkkaHDLCPGLJ_52 (original name was: gnl|Prokka|HDLCPGLJ_52); gnlProkkaHDLCPGLJ_53 (original name was: gnl|Prokka|HDLCPGLJ_53); gnlProkkaHDLCPGLJ_54 (original name was: gnl|Prokka|HDLCPGLJ_54); gnlProkkaHDLCPGLJ_55 (original name was: gnl|Prokka|HDLCPGLJ_55); gnlProkkaHDLCPGLJ_56 (original name was: gnl|Prokka|HDLCPGLJ_56); gnlProkkaHDLCPGLJ_57 (original name was: gnl|Prokka|HDLCPGLJ_57); gnlProkkaHDLCPGLJ_58 (original name was: gnl|Prokka|HDLCPGLJ_58); gnlProkkaHDLCPGLJ_59 (original name was: gnl|Prokka|HDLCPGLJ_59); gnlProkkaHDLCPGLJ_60 (original name was: gnl|Prokka|HDLCPGLJ_60); gnlProkkaHDLCPGLJ_61 (original name was: gnl|Prokka|HDLCPGLJ_61); gnlProkkaHDLCPGLJ_62 (original name was: gnl|Prokka|HDLCPGLJ_62); gnlProkkaHDLCPGLJ_63 (original name was: gnl|Prokka|HDLCPGLJ_63); gnlProkkaHDLCPGLJ_64 (original name was: gnl|Prokka|HDLCPGLJ_64); gnlProkkaHDLCPGLJ_65 (original name was: gnl|Prokka|HDLCPGLJ_65); gnlProkkaHDLCPGLJ_66 (original name was: gnl|Prokka|HDLCPGLJ_66); gnlProkkaHDLCPGLJ_67 (original name was: gnl|Prokka|HDLCPGLJ_67); gnlProkkaHDLCPGLJ_68 (original name was: gnl|Prokka|HDLCPGLJ_68); gnlProkkaHDLCPGLJ_69 (original name was: gnl|Prokka|HDLCPGLJ_69); gnlProkkaHDLCPGLJ_70 (original name was: gnl|Prokka|HDLCPGLJ_70); gnlProkkaHDLCPGLJ_71 (original name was: gnl|Prokka|HDLCPGLJ_71); gnlProkkaHDLCPGLJ_72 (original name was: gnl|Prokka|HDLCPGLJ_72); gnlProkkaHDLCPGLJ_73 (original name was: gnl|Prokka|HDLCPGLJ_73); gnlProkkaHDLCPGLJ_74 (original name was: gnl|Prokka|HDLCPGLJ_74); gnlProkkaHDLCPGLJ_75 (original name was: gnl|Prokka|HDLCPGLJ_75); gnlProkkaHDLCPGLJ_76 (original name was: gnl|Prokka|HDLCPGLJ_76); gnlProkkaHDLCPGLJ_77 (original name was: gnl|Prokka|HDLCPGLJ_77); gnlProkkaHDLCPGLJ_78 (original name was: gnl|Prokka|HDLCPGLJ_78); gnlProkkaHDLCPGLJ_79 (original name was: gnl|Prokka|HDLCPGLJ_79); gnlProkkaHDLCPGLJ_80 (original name was: gnl|Prokka|HDLCPGLJ_80); gnlProkkaHDLCPGLJ_81 (original name was: gnl|Prokka|HDLCPGLJ_81)

Compact view

gnlProkkaHDLCPGLJ_33 - Region 1 - cyclic-lactone-autoinducer

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Location: 78,536 - 99,132 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDLCPGLJ_48 - Region 1 - T3PKS

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Location: 1 - 5,759 nt. (total: 5,759 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDLCPGLJ_82 - Region 1 - RiPP-like

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Location: 18,098 - 30,248 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDLCPGLJ_83 - Region 1 - terpene

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Location: 101,158 - 122,039 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.