GCA_039566535.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAOEJOGMP_4 (original name was: gnl|Prokka|AOEJOGMP_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	21,436	33,586

gnlProkkaAOEJOGMP_22 (original name was: gnl|Prokka|AOEJOGMP_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	cyclic-lactone-autoinducer	76,471	97,176

gnlProkkaAOEJOGMP_44 (original name was: gnl|Prokka|AOEJOGMP_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	terpene	80,986	101,867

gnlProkkaAOEJOGMP_56 (original name was: gnl|Prokka|AOEJOGMP_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	T3PKS	1	26,827

Region	Type	From	To	Similarity
Region 4.1	RiPP-like	21,436	33,586
Region 22.1	cyclic-lactone-autoinducer	76,471	97,176
Region 44.1	terpene	80,986	101,867
Region 56.1	T3PKS	1	26,827

No secondary metabolite regions were found in these records:: gnlProkkaAOEJOGMP_1 (original name was: gnl|Prokka|AOEJOGMP_1); gnlProkkaAOEJOGMP_2 (original name was: gnl|Prokka|AOEJOGMP_2); gnlProkkaAOEJOGMP_3 (original name was: gnl|Prokka|AOEJOGMP_3); gnlProkkaAOEJOGMP_5 (original name was: gnl|Prokka|AOEJOGMP_5); gnlProkkaAOEJOGMP_6 (original name was: gnl|Prokka|AOEJOGMP_6); gnlProkkaAOEJOGMP_7 (original name was: gnl|Prokka|AOEJOGMP_7); gnlProkkaAOEJOGMP_8 (original name was: gnl|Prokka|AOEJOGMP_8); gnlProkkaAOEJOGMP_9 (original name was: gnl|Prokka|AOEJOGMP_9); gnlProkkaAOEJOGMP_10 (original name was: gnl|Prokka|AOEJOGMP_10); gnlProkkaAOEJOGMP_11 (original name was: gnl|Prokka|AOEJOGMP_11); gnlProkkaAOEJOGMP_12 (original name was: gnl|Prokka|AOEJOGMP_12); gnlProkkaAOEJOGMP_13 (original name was: gnl|Prokka|AOEJOGMP_13); gnlProkkaAOEJOGMP_14 (original name was: gnl|Prokka|AOEJOGMP_14); gnlProkkaAOEJOGMP_15 (original name was: gnl|Prokka|AOEJOGMP_15); gnlProkkaAOEJOGMP_16 (original name was: gnl|Prokka|AOEJOGMP_16); gnlProkkaAOEJOGMP_17 (original name was: gnl|Prokka|AOEJOGMP_17); gnlProkkaAOEJOGMP_18 (original name was: gnl|Prokka|AOEJOGMP_18); gnlProkkaAOEJOGMP_19 (original name was: gnl|Prokka|AOEJOGMP_19); gnlProkkaAOEJOGMP_20 (original name was: gnl|Prokka|AOEJOGMP_20); gnlProkkaAOEJOGMP_21 (original name was: gnl|Prokka|AOEJOGMP_21); gnlProkkaAOEJOGMP_23 (original name was: gnl|Prokka|AOEJOGMP_23); gnlProkkaAOEJOGMP_24 (original name was: gnl|Prokka|AOEJOGMP_24); gnlProkkaAOEJOGMP_25 (original name was: gnl|Prokka|AOEJOGMP_25); gnlProkkaAOEJOGMP_26 (original name was: gnl|Prokka|AOEJOGMP_26); gnlProkkaAOEJOGMP_27 (original name was: gnl|Prokka|AOEJOGMP_27); gnlProkkaAOEJOGMP_28 (original name was: gnl|Prokka|AOEJOGMP_28); gnlProkkaAOEJOGMP_29 (original name was: gnl|Prokka|AOEJOGMP_29); gnlProkkaAOEJOGMP_30 (original name was: gnl|Prokka|AOEJOGMP_30); gnlProkkaAOEJOGMP_31 (original name was: gnl|Prokka|AOEJOGMP_31); gnlProkkaAOEJOGMP_32 (original name was: gnl|Prokka|AOEJOGMP_32); gnlProkkaAOEJOGMP_33 (original name was: gnl|Prokka|AOEJOGMP_33); gnlProkkaAOEJOGMP_34 (original name was: gnl|Prokka|AOEJOGMP_34); gnlProkkaAOEJOGMP_35 (original name was: gnl|Prokka|AOEJOGMP_35); gnlProkkaAOEJOGMP_36 (original name was: gnl|Prokka|AOEJOGMP_36); gnlProkkaAOEJOGMP_37 (original name was: gnl|Prokka|AOEJOGMP_37); gnlProkkaAOEJOGMP_38 (original name was: gnl|Prokka|AOEJOGMP_38); gnlProkkaAOEJOGMP_39 (original name was: gnl|Prokka|AOEJOGMP_39); gnlProkkaAOEJOGMP_40 (original name was: gnl|Prokka|AOEJOGMP_40); gnlProkkaAOEJOGMP_41 (original name was: gnl|Prokka|AOEJOGMP_41); gnlProkkaAOEJOGMP_42 (original name was: gnl|Prokka|AOEJOGMP_42); gnlProkkaAOEJOGMP_43 (original name was: gnl|Prokka|AOEJOGMP_43); gnlProkkaAOEJOGMP_45 (original name was: gnl|Prokka|AOEJOGMP_45); gnlProkkaAOEJOGMP_46 (original name was: gnl|Prokka|AOEJOGMP_46); gnlProkkaAOEJOGMP_47 (original name was: gnl|Prokka|AOEJOGMP_47); gnlProkkaAOEJOGMP_48 (original name was: gnl|Prokka|AOEJOGMP_48); gnlProkkaAOEJOGMP_49 (original name was: gnl|Prokka|AOEJOGMP_49); gnlProkkaAOEJOGMP_50 (original name was: gnl|Prokka|AOEJOGMP_50); gnlProkkaAOEJOGMP_51 (original name was: gnl|Prokka|AOEJOGMP_51); gnlProkkaAOEJOGMP_52 (original name was: gnl|Prokka|AOEJOGMP_52); gnlProkkaAOEJOGMP_53 (original name was: gnl|Prokka|AOEJOGMP_53); gnlProkkaAOEJOGMP_54 (original name was: gnl|Prokka|AOEJOGMP_54); gnlProkkaAOEJOGMP_55 (original name was: gnl|Prokka|AOEJOGMP_55)

Compact view

gnlProkkaAOEJOGMP_4 - Region 1 - RiPP-like

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Location: 21,436 - 33,586 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOEJOGMP_22 - Region 1 - cyclic-lactone-autoinducer

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Location: 76,471 - 97,176 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOEJOGMP_44 - Region 1 - terpene

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Location: 80,986 - 101,867 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOEJOGMP_56 - Region 1 - T3PKS

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Location: 1 - 26,827 nt. (total: 26,827 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.