Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_039631115.1	Lacticaseibacillus paracasei	L17	SAMN41249976	2023-05-30	Slovakia	-	0	0	0	2	2.00
2	GCA_039631235.1	Lacticaseibacillus paracasei	L18	SAMN41249977	2023-05-30	Slovakia	-	0	0	0	2	2.00
3	GCA_039631055.1	Lacticaseibacillus paracasei	B19	SAMN41249973	2023-04-25	Slovakia	-	71	0	0	2	2.00
4	GCA_039631165.1	Lacticaseibacillus paracasei	B25	SAMN41249975	2023-04-25	Slovakia	-	71	0	0	2	2.00
5	GCA_039631215.1	Lacticaseibacillus paracasei	B20	SAMN41249974	2023-04-25	Slovakia	-	72	0	0	2	2.00
6	GCA_039631065.1	Lacticaseibacillus paracasei	B18	SAMN41249972	2023-04-25	Slovakia	-	73	0	0	2	2.00
7	GCA_003712325.1	Lacticaseibacillus paracasei	FAM18123	SAMN04088867	2003	Switzerland	-	152	0	0	2	2.00
8	GCA_030361125.1	Lacticaseibacillus paracasei	TOM.15.25	SAMN35776887	2021-11	Russia: Primorsky Krai	-	283	0	0	2	2.00
9	GCA_003712705.1	Lacticaseibacillus paracasei	FAM22279	SAMN04088884	-	Switzerland	-	294	0	0	2	2.00
10	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	316	0	0	2	2.00
11	GCA_003712265.1	Lacticaseibacillus paracasei	FAM18110	SAMN04088863	2003	Switzerland	-	318	0	0	2	2.00
12	GCA_000409935.1	Lacticaseibacillus paracasei subsp. paracasei Lpp120	Lpp120	SAMN02469723	2003	-	-	319	0	0	2	2.00
13	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	319	0	0	2	2.00
14	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	330	0	0	2	2.00
15	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	332	0	0	1	1.00
16	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	344	0	0	2	2.00
17	GCA_002120125.1	Lacticaseibacillus paracasei	HZ-1	SAMN05954276	2012-06	China: Tianjin	-	354	0	0	2	2.00
18	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	354	0	0	2	2.00
19	GCA_000014525.1	Lacticaseibacillus paracasei ATCC 334	ATCC 334	SAMN02598528	-	-	-	358	0	0	1	1.00
20	GCA_047946965.1	Lacticaseibacillus paracasei	XM-38	SAMN30660290	2017-06-01	China:Inner Mongolia	-	373	0	0	1	1.00
21	GCA_000309705.1	Lacticaseibacillus paracasei	UCD174	SAMN02472002	-	USA: California	-	399	0	0	2	2.00
22	GCA_002027405.1	Lacticaseibacillus paracasei	W16	SAMN06479973	2012-03	China: Nanchang	-	410	0	0	2	2.00
23	GCA_040267725.1	Lacticaseibacillus paracasei	TCI727	SAMN41829189	2020-05-01	Taiwan:Taipei	-	412	0	0	1	1.00
24	GCA_010363715.1	Lacticaseibacillus paracasei	D10-4	SAMN13943411	2018-01-10	USA	Homo sapiens	413	0	0	2	2.00
25	GCA_028321965.1	Lacticaseibacillus paracasei	1001216st1_C7_1001216I_160404	SAMN31322631	2016-04-04	USA	Homo sapiens	413	0	0	2	2.00
26	GCA_028322025.1	Lacticaseibacillus paracasei	1001216st1_H7_1001713B170131_170501	SAMN31322633	2017-05-01	USA	Homo sapiens	413	0	0	2	2.00
27	GCA_028322845.1	Lacticaseibacillus paracasei	1001216st1_D9_D55t1_190419	SAMN31322632	2019-04-19	USA	Homo sapiens	413	0	0	2	2.00
28	GCA_028322955.1	Lacticaseibacillus paracasei	1001216st1_B6_D55t1_190419	SAMN31322630	2019-04-19	USA	Homo sapiens	413	0	0	2	2.00
29	GCA_040093155.1	Lacticaseibacillus paracasei	CLA-AA-H40	SAMN40631522	2019-07-25	Germany:Aachen	Homo sapiens	413	0	0	2	2.00
30	GCA_024125225.1	Lacticaseibacillus paracasei	NB2B-AER-MRS-02	SAMN28102056	2016-04	-	Homo sapiens	414	0	0	1	1.00
31	GCA_003712625.1	Lacticaseibacillus paracasei	FAM19404	SAMN04088880	1990	Switzerland	-	415	0	0	2	2.00
32	GCA_025211235.1	Lacticaseibacillus paracasei	1017	SAMN10365678	2014	Ethiopia	-	418	0	0	2	2.00
33	GCA_004167215.1	Lacticaseibacillus paracasei	co_0103	SAMN10239551	2015-01	USA: Cambridge	Homo sapiens	420	1	2	2	3.00
34	GCA_009679435.1	Lacticaseibacillus paracasei	BIOML-A3	SAMN11946116	2015-12-09	USA:Boston	Homo sapiens	420	0	0	2	2.00
35	GCA_009679495.1	Lacticaseibacillus paracasei	BIOML-A2	SAMN11946115	2015-12-09	USA:Boston	Homo sapiens	420	1	2	2	3.00
36	GCA_009679505.1	Lacticaseibacillus paracasei	BIOML-A1	SAMN11946114	2015-12-09	USA:Boston	Homo sapiens	420	0	0	2	2.00
37	GCA_019641395.1	Lacticaseibacillus paracasei	LB113R	SAMN20672827	2018	Denmark	-	420	0	0	2	2.00
38	GCA_026967095.1	Lacticaseibacillus paracasei	Lpc_yogurt_C5	SAMN32062184	2021-07-27	USA:Chicago	-	420	0	0	2	2.00
39	GCA_026967175.1	Lacticaseibacillus paracasei	Lpc_yogurt_C3	SAMN32062182	2021-07-27	USA:Chicago	-	420	0	0	3	3.00
40	GCA_026967235.1	Lacticaseibacillus paracasei	Lpc_yogurt_C1	SAMN32062180	2021-07-27	USA:Chicago	-	420	0	0	2	2.00
41	GCA_028322925.1	Lacticaseibacillus paracasei	1001217st1_H10_1001216I_160404	SAMN31322636	2016-04-04	USA	Homo sapiens	420	0	0	2	2.00
42	GCA_039566645.1	Lacticaseibacillus paracasei	A191	SAMN41162755	2007	Slovakia	-	423	0	0	2	2.00
43	GCA_009679455.1	Lacticaseibacillus paracasei	BIOML-A4	SAMN11946117	2015-12-09	USA:Boston	Homo sapiens	427	0	0	2	2.00
44	GCA_003712535.1	Lacticaseibacillus paracasei	FAM18175	SAMN04088877	2003	Switzerland	-	432	0	0	2	2.00
45	GCA_039838545.1	Lacticaseibacillus paracasei	1001217st1_G4_1001217B_191108	SAMN31322635	2019-11-08	USA	Homo sapiens	435	0	0	2	2.00
46	GCA_018286435.1	Lacticaseibacillus paracasei subsp. tolerans	2A	SAMN18869149	2014-03-31	USA	-	441	0	0	1	1.00
47	GCA_039838525.1	Lacticaseibacillus paracasei	1001217st1_A4_1001217B_191108	SAMN31322634	2019-11-08	USA	Homo sapiens	444	0	0	2	2.00
48	GCA_000410315.1	Lacticaseibacillus paracasei subsp. paracasei Lpp14	Lpp14	SAMN02469711	1989	-	-	449	0	0	2	2.00
49	GCA_039838565.1	Lacticaseibacillus paracasei	1001217st1_H5_1001217B_191108	SAMN31322637	2019-11-08	USA	Homo sapiens	472	0	0	2	2.00
50	GCA_030361225.1	Lacticaseibacillus paracasei	TOM.262	SAMN35776883	2022-04	Russia: North Ossetia	-	504	0	0	2	2.00
51	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	505	0	0	1	1.00
52	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	507	0	0	2	2.00
53	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	510	0	0	2	2.00
54	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	510	0	0	2	2.00
55	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	510	0	0	2	2.00
56	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	511	0	0	2	2.00
57	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	511	0	0	1	1.00
58	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	511	0	0	2	2.00
59	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	511	0	0	2	2.00
60	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	512	0	0	1	1.00
61	GCA_003712425.1	Lacticaseibacillus paracasei	FAM18124	SAMN04088868	2003	Switzerland	-	522	0	0	2	2.00
62	GCA_003712445.1	Lacticaseibacillus paracasei	FAM18129	SAMN04088870	2003	Switzerland	-	522	0	0	2	2.00
63	GCA_016887835.1	Lacticaseibacillus paracasei	2333	SAMN17562094	2011-09-29	Italy	-	524	0	0	2	2.00
64	GCA_002027415.1	Lacticaseibacillus paracasei	W14	SAMN06480069	2012-03	China: Nanchang	-	534	0	0	2	2.00
65	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	537	0	0	2	2.00
66	GCA_003712295.1	Lacticaseibacillus paracasei	FAM18099	SAMN04088859	2003	Switzerland	-	569	0	0	1	1.00
67	GCA_003712925.1	Lacticaseibacillus paracasei	FAM18126	SAMN04088869	2003	Switzerland	-	577	0	0	2	2.00
68	GCA_000582665.1	Lacticaseibacillus paracasei N1115	N1115	SAMN03081525	-	China: Inner Mongolia	-	581	0	1	1	1.41
69	GCA_000410375.1	Lacticaseibacillus paracasei subsp. paracasei Lpp71	Lpp71	SAMN02469712	1999	-	-	586	0	0	1	1.00
70	GCA_000410255.1	Lacticaseibacillus paracasei subsp. paracasei Lpp7	Lpp7	SAMN02469713	1982	-	-	593	0	1	3	3.16
71	GCA_003545945.1	Lacticaseibacillus paracasei	TJB4	SAMN09604022	2014-09-01	Tajikistan	-	593	0	0	2	2.00
72	GCA_020992235.1	Lacticaseibacillus paracasei subsp. paracasei	VKM B-1144	SAMN23026586	1952	USA: Illinois	Homo sapiens	593	0	0	1	1.00
73	GCA_025190825.1	Lacticaseibacillus paracasei	CIRM-BIA 2105	SAMN10365434	1993	Japan	-	605	0	0	2	2.00
74	GCA_000410495.1	Lacticaseibacillus paracasei subsp. paracasei Lpp70	Lpp70	SAMN02641493	1999	-	-	608	0	1	2	2.24
75	GCA_039566245.1	Lacticaseibacillus paracasei	Z11	SAMN41162775	2022-10-11	Slovakia	-	610	0	0	2	2.00
76	GCA_039566565.1	Lacticaseibacillus paracasei	G185	SAMN41162749	2007	Slovakia	-	610	0	0	2	2.00
77	GCA_039566655.1	Lacticaseibacillus paracasei	G183	SAMN41162748	2007	Slovakia	-	610	0	0	2	2.00
78	GCA_008868525.1	Lacticaseibacillus paracasei	BIO5452	SAMN12856540	-	-	-	619	0	0	2	2.00
79	GCA_025190765.1	Lacticaseibacillus paracasei	CIRM-BIA 1511	SAMN10365436	1987	Spain	-	619	0	0	2	2.00
80	GCA_000410275.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270	CNCM I-4270	SAMN02469729	2000	-	-	621	0	0	2	2.00
81	GCA_024329455.1	Lacticaseibacillus paracasei	Kef-w14	SAMN18720967	2020-10-16	Singapore	-	623	0	0	2	2.00
82	GCA_039566745.1	Lacticaseibacillus paracasei	Z08	SAMN41162774	2022-10-11	Slovakia	-	624	0	0	2	2.00
83	GCA_003346265.1	Lacticaseibacillus paracasei	KMB_616	SAMN09398948	2008	Slovakia	-	626	0	0	2	2.00
84	GCA_044905105.1	Lacticaseibacillus paracasei	E	SAMN44286705	-	-	-	627	0	0	1	1.00
85	GCA_046116425.1	Lacticaseibacillus paracasei	M115-8W-2	SAMN38225291	2022	Taiwan	Homo sapiens	628	0	0	1	1.00
86	GCA_008369945.1	Lacticaseibacillus paracasei	DTA93	SAMN12661681	2016-10-22	Brazil	Homo sapiens	635	0	0	2	2.00
87	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	650	0	0	2	2.00
88	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	650	0	0	2	2.00
89	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	652	0	0	2	2.00
90	GCA_905131355.1	Lacticaseibacillus paracasei	-	SAMEA7577051	-	-	-	652	0	0	2	2.00
91	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	652	0	0	2	2.00
92	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	653	0	0	1	1.00
93	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	653	0	0	1	1.00
94	GCA_000194765.1	Lacticaseibacillus paracasei	BD-II	SAMN02603876	-	China	-	654	0	0	1	1.00
95	GCA_000194785.1	Lacticaseibacillus paracasei	LC2W	SAMN02603877	-	China: Inner Mongolia	-	654	0	0	1	1.00
96	GCA_002849575.1	Lacticaseibacillus paracasei	DUP 13076	SAMN08239980	2013	USA	-	654	0	0	2	2.00
97	GCA_003957435.1	Lacticaseibacillus paracasei subsp. tolerans	AO356	SAMN08200884	2016-10-13	South Korea: Seoul	-	654	0	0	1	1.00
98	GCA_007292115.1	Lacticaseibacillus paracasei	CBA3611	SAMN11890849	2018-11	South Korea: Gwangju	Homo sapiens	654	0	0	1	1.00
99	GCA_011031945.1	Lacticaseibacillus paracasei	VA02-1AN	SAMN14087235	2015-08	Thailand: Khon Kean	Homo sapiens	654	0	0	2	2.00
100	GCA_022478075.1	Lacticaseibacillus paracasei	VHProbi F22	SAMN23765140	2019-11-18	China:Inner Mongolia Autonomous Region	-	654	0	0	1	1.00