GCA_039783285.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAKLABAIJ_1 (original name was: gnl|Prokka|AKLABAIJ_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	lanthipeptide-class-ii	115,483	138,185
Region 2	RiPP-like	367,289	386,200
Region 3	RaS-RiPP	480,471	502,762
Region 4	RaS-RiPP	633,404	655,828	streptide	RiPP	100%
Region 5	RaS-RiPP	1,086,592	1,109,817
Region 6	RRE-containing	1,404,208	1,425,341
Region 7	NRPS-like	1,654,628	1,697,519	asukamycin	Polyketide:Type II polyketide	4%
Region 8	lanthipeptide-class-iv	1,859,358	1,881,517

gnlProkkaAKLABAIJ_1 - Region 1 - lanthipeptide-class-ii

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Location: 115,483 - 138,185 nt. (total: 22,703 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptide(s) for ctg1_114

ctg1_113

Leader:

MENNNFEGSVDLERLEKISGA

Core:

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKGFCK

Core with dehydrations:

DhaGEVQPRDhaDhbPDhbVDhbVPIADhbPELDhbAIDhaALDhbVDhaVDhaNFVDhbKYRDhaCysGKGFCysK

antiSMASH-DB 4.0 matches for ctg1_113

100.0% NZ_JAKVIH010000006.1and 1 other:

NZ_JAQEOM010000007.1 Lanthipeptides: PGW12_RS04385_lanthipeptide

Lanthipeptides: MK858_RS03865_lanthipeptide

1

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKGFCK

47

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKGFCK

1

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKGFCK

47

72.3% NZ_QXPZ01000025.1: Lanthipeptides: D3H64_RS06235_lanthipeptide

1

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKGFC

46

SG+ Q R+TPTV P+ TPELTAISALTV +SNFVTK++SCGKGFC

1

SGDAQARTTPTVVAPLTTPELTAISALTVGISNFVTKFKSCGKGFC

46

38.3% NZ_AP025700.1: Lanthipeptides: LLL8_RS09490_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTA-ISALT--VSVSNFVTKYRSCGK

43

++ RSTPTV I +PE++A ISA T ++ S T + C K

1

ANIEARSTPTV-AAITSPEMSAMISAATSVITASIAATFAKKCKK

44

with 44 more sequence matches

34.0% NZ_GG730336.1: Lanthipeptides: SAUG_RS08755_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAIS--ALTVSVSNFVTKYRSC

41

G V+P++TPT+ P TP IS A +VS V+ + C

2

GTVEPQATPTIASPF-TPYAIEISIGATVSAVSGLVSYTKDC

42

34.0% NZ_JACWFH010000015.1: Lanthipeptides: H0185_RS13720_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKG

44

G+VQP +TPTV VP L + +TK CG G

1

GDVQPEATPTV-VPFTGGILFGVG---------MTKLFGCGSG

33

31.9% NZ_CP099547.1: Lanthipeptides: allorf_0559994_0560212_lanthipeptide

2

GEVQPRSTPTVT---VPIATPELTAISALTVSVSNFV

35

G + P +TPTVT VP AT AL +FV

2

GGITPNATPTVTTSSVPCATVSKAVSGALVSWTVSFV

38

29.8% NZ_CP044545.1: Lanthipeptides: F7984_RS17855_lanthipeptide

1

SGEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSC

41

+GE+QP+ TP TV ISAL V +++ C

1

NGEIQPQGTPAATV---------ISALASFVGSYLVTAVFC

32

29.8% NZ_CP086145.1: Lanthipeptides: LL065_RS26230_lanthipeptide

3

EVQPRSTPTVT---VPIATPELTAISALTVS

30

+VQ ++TPT+ V + + ELTA SA+TV+

1

DVQAQTTPTIASFLVSVISIELTA-SAVTVT

30

29.8% NZ_JACSPZ010000014.1: Lanthipeptides: H9635_RS18390_lanthipeptide

1

SGEVQPRSTPTVTVPIATPE--LTAISALTVSVSNFVTKYRSC

41

SG V+P +TP ++ + + L AISA +S V+ + C

1

SGVVEPHTTPILSAATKSSKKCLGAISA----ISGLVSYNKDC

39

29.8% NZ_JHWP01000013.1: Lanthipeptides: T535_RS0110485_lanthipeptide

15

PIATPELTAISALTVSVSNFVTKYRSCG

42

P LTAIS L+ SV++ V+K+R CG

3

PAVVSALTAISGLSHSVTSHVSKHRKCG

30

29.8% NZ_LN884299.1: Lanthipeptides: BN2762_RS08660_lanthipeptide

3

EVQPRSTPTVTVPI----ATPELTAISALTVSVSNFVTKYRSC

41

+V PR+TPT+ I A ISA+ ++S V+ ++C

2

DVDPRATPTIVASIIRSVAQSSKVCISAVGSAISGIVSNNKNC

44

27.7% NZ_CP101913.1and 1 other:

NZ_CP101913.1 Lanthipeptides: NP440_RS09140_lanthipeptide

Lanthipeptides: NP440_RS09140_lanthipeptide

5

QPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGKG

44

+P+ TPTVT+P ISA + + R C G

3

EPQGTPTVTIP--------ISAAICPTTQCASIVRPCNNG

34

27.7% NZ_JALDUX010000010.1: Lanthipeptides: M1F92_RS09530_lanthipeptide

1

SGEVQPRSTPT--VTVPIATPELTAISALTVSVSNFVTKYRSC

41

S +PR TPT + A ISAL + V+ C

1

SDGAEPRWTPTPLILKSAAASSKVCISALVSGIGGLVSYNNDC

43

27.7% NZ_PVRU01000017.1and 1 other:

NZ_PVRU01000017.1 Lanthipeptides: C6360_RS28285_lanthipeptide

Lanthipeptides: C6360_RS28285_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVSVSNFVTKYRSCGK

43

G+V+P +TP + ALT+ +S K SCG

1

GDVKPETTPAFGGGV---------ALTIGLS----KLLSCGH

29

25.5% NZ_FTML01000041.1: Lanthipeptides: BW937_RS20030_lanthipeptide

2

GEVQPRSTPT-----VTVPIATPEL

21

G+VQP STP +TV IA +L

1

GDVQPESTPACVGAGITVGIAISKL

25

25.5% NZ_JAMXMK010000009.1: Lanthipeptides: NGM22_RS28125_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVSVSN

33

G+VQP STP V + + A A +S N

1

GDVQPESTPACAVGVT---IAAWGAHKLSYWN

29

23.4% NZ_CP094446.1: Lanthipeptides: L3476_RS23825_lanthipeptide

3

EVQPRSTP-TVTVPIATPELTAISALTVSVSNFVTKYRSC

41

+V+PR TP T+ + ISA+ ++S ++ + C

2

DVEPRGTPATIVSAVTRSSKPCISAIGSAISGIISHNKDC

41

23.4% NZ_JACSNF010000005.1and 1 other:

NZ_LMPR01000013.1 Lanthipeptides: ASF99_RS16390_lanthipeptide

Lanthipeptides: KNQ12_RS14665_lanthipeptide

3

EVQPRSTPTVTV---PIATPELTAISALTVSVSNFVTKYRSC

41

+V PR TP +++ I I A ++S V+ + C

2

DVDPRWTPVISLVARSIVKSTKACIGAGASAISGIVSHNKDC

43

23.4% NZ_JAHHYI010000012.1: Lanthipeptides: KM925_RS25405_lanthipeptide

2

GEVQPRSTPT-----VTVPIATPEL

21

G+VQP +TP +TV IA +L

1

GDVQPETTPACVGAGITVGIAISKL

25

23.4% NZ_JAMXMK010000009.1and 1 other:

NZ_JAMXMK010000009.1 Lanthipeptides: NGM22_RS28055_lanthipeptide

Lanthipeptides: NGM22_RS28055_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVSVSN

33

G+VQP +TP + A + A A +S N

1

GDVQPETTPGCGIA-AGITIAAWGAHQLSYYN

31

23.4% NZ_PVRU01000017.1and 3 others:

NZ_PVRU01000017.1 Lanthipeptides: C6360_RS28255_lanthipeptideNZ_PVRU01000017.1 Lanthipeptides: C6360_RS28260_lanthipeptideNZ_PVRU01000017.1 Lanthipeptides: C6360_RS28255_lanthipeptide

Lanthipeptides: C6360_RS28260_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVSVS

32

G+VQP +TP T + T + + LT+S++

1

GDVQPETTPAAT--LITSTVLCANGLTISIA

29

21.3% NC_018499.1and 6 others:

NC_018499.1 Lanthipeptides: BCK_RS27840_lanthipeptideNC_018499.1 Lanthipeptides: BCK_RS27835_lanthipeptideNC_018499.1 Lanthipeptides: BCK_RS27845_lanthipeptideNC_018499.1 Lanthipeptides: BCK_RS27840_lanthipeptideNC_018499.1 Lanthipeptides: BCK_RS27835_lanthipeptideNZ_MLKL01000042.1 Lanthipeptides: BKK45_RS27405_lanthipeptide

Lanthipeptides: BCK_RS27845_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAIS

25

G+V P +TP ATP + A+S

1

GDVNPETTP------ATPTIVAVS

18

21.3% NZ_CP026035.1: Lanthipeptides: C2H96_RS00305_lanthipeptide

3

EVQPRSTPTVTV---PIATPELTAISALTVSVSNFVTKYRSC

41

+ PR TP V+ + IS + ++S V+ + C

2

DADPRWTPAVSAVLSAVGRSTRLCISGIGSAISGIVSHNKDC

43

21.3% NZ_JAHHYI010000012.1: Lanthipeptides: KM925_RS25410_lanthipeptide

2

GEVQPRSTPTV--TVPIA

17

G+VQP +TP T+PIA

1

GDVQPETTPLCLPTIPIA

18

21.3% NZ_JAMDLZ010000027.1: Lanthipeptides: M5W82_RS15520_lanthipeptide

3

EVQPRSTP-TVTVPIA

17

E+QP+ TP TVT+PI+

2

EIQPKWTPLTVTIPIS

17

21.3% NZ_JAQEHQ010000019.1and 1 other:

NZ_JAQEHQ010000019.1 Lanthipeptides: PGR68_RS12855_lanthipeptide

Lanthipeptides: PGR68_RS12860_lanthipeptide

2

GEVQPRSTPTV---TVPIATPELTAISAL

27

GE++P+S V T+ I P +++++AL

4

GEIEPQSISAVVSATLKICLPAVSSVTAL

32

19.1% NC_014622.2and 5 others:

NC_017542.1 Lanthipeptides: PPM_RS22280_lanthipeptideNZ_CP029370.1 Lanthipeptides: DI243_RS20990_lanthipeptideNZ_CP034141.1 Lanthipeptides: EGM68_RS21685_lanthipeptideNZ_PNXP01000027.1 Lanthipeptides: C1I59_RS20700_lanthipeptideNZ_POVS01000032.1 Lanthipeptides: C1T21_RS26405_lanthipeptide

Lanthipeptides: PPSC2_RS50140_lanthipeptide

4

VQPRSTPTVTV

14

VQP STPT+TV

3

VQPDSTPTITV

13

19.1% NZ_AP021901.1: Lanthipeptides: allorf_0919682_0919813_lanthipeptide

6

PRSTPTVTVPIATPELT

22

P S P TV A PE+T

2

PESPPKTTVVYANPEIT

18

19.1% NZ_JAQDYA010000001.1: Lanthipeptides: PGT72_RS00025_lanthipeptide

2

GEVQPRSTPTVTVPIATPELTAISALTVS

30

G++ P +TP +A+ A +A VS

1

GDITPETTPVCAATVASSAYCAGAASAVS

29

19.1% NZ_JAQQWR010000009.1: Lanthipeptides: PQ473_RS20185_lanthipeptide

3

EVQPRSTPTVTVPIATPELTAI

24

+V P +TP IAT L +I

2

DVAPETTPACAAAIATGMLFSI

23

19.1% NZ_MSTN01000008.1and 1 other:

NZ_MSTN01000008.1 Lanthipeptides: BVF97_RS19715_lanthipeptide

Lanthipeptides: BVF97_RS19720_lanthipeptide

2

GEVQPRSTPTVT

13

G+VQP STP VT

1

GDVQPHSTPAVT

12

17.0% NZ_CP011152.1and 3 others:

NZ_CP011152.1 Lanthipeptides: WR47_RS28830_lanthipeptideNZ_CP011152.1 Lanthipeptides: WR47_RS28835_lanthipeptideNZ_CP011152.1 Lanthipeptides: WR47_RS28830_lanthipeptide

Lanthipeptides: WR47_RS28835_lanthipeptide

2

GEVQPRSTPTVTV

14

G+V P++TPTVT+

1

GDVTPQATPTVTI

13

17.0% NZ_CP012102.1and 1 other:

NZ_CP012102.1 Lanthipeptides: AC241_RS31310_lanthipeptide

Lanthipeptides: AC241_RS31310_lanthipeptide

2

GEVQPRSTPTVTVPIA

17

G+VQP +TP + IA

1

GDVQPETTPACGIAIA

16

17.0% NZ_CP030771.1: Lanthipeptides: allorf_09785478_09785648_lanthipeptide

8

STPTVTVPIATPELT

22

S PT +P +PELT

27

SAPTADIPTISPELT

41

17.0% NZ_CP034118.1and 1 other:

NZ_CP034118.1 Lanthipeptides: EG886_RS06300_lanthipeptide

Lanthipeptides: EG886_RS06300_lanthipeptide

2

GEVQPRSTPTVTVPIA

17

GEV+P+S P V +A

1

GEVRPQSGPVCAVTLA

16

17.0% NZ_JAHHYI010000012.1: Lanthipeptides: KM925_RS25415_lanthipeptide

2

GEVQPRSTPTVT

13

G+VQP +TP VT

1

GDVQPETTPGVT

12

17.0% NZ_MIFM01000001.1and 1 other:

NZ_NINI01000009.1 Lanthipeptides: CEV12_RS07280_lanthipeptide

Lanthipeptides: BHL22_RS00425_lanthipeptide

2

GEVQPRSTPTVTVPIAT

18

G+VQ +TP V +AT

1

GDVQAETTPVCAVSVAT

17

14.9% NZ_FNYB01000007.1and 1 other:

NZ_KB976303.1 Lanthipeptides: IGY_RS28100_lanthipeptide

Lanthipeptides: BMZ34_RS15340_lanthipeptide

6

PRSTPTVTVPI

16

PR TP + VPI

14

PRVTPQICVPI

24

14.9% NZ_FPCC01000026.1: Lanthipeptides: BM377_RS12935_lanthipeptide

2

GEVQPRSTPTVTVPIA

17

G+V +TP +TV A

1

GDVDAETTPAITVSAA

16

14.9% NZ_JAMXMK010000009.1: Lanthipeptides: NGM22_RS28130_lanthipeptide

2

GEVQPRSTP

10

G+VQP STP

1

GDVQPESTP

9

12.8% NZ_CP012102.1and 1 other:

NZ_CP012102.1 Lanthipeptides: AC241_RS31295_lanthipeptide

Lanthipeptides: AC241_RS31385_lanthipeptide

2

GEVQPRSTPTVTV

14

G+VQP ++P V

1

GDVQPETSPACAV

13

12.8% NZ_CP012102.1and 18 others:

NZ_CP012102.1 Lanthipeptides: AC241_RS34125_lanthipeptideNZ_CP048887.1 Lanthipeptides: BMG_RS29400_lanthipeptideNZ_CP048887.1 Lanthipeptides: BMG_RS29410_lanthipeptideNZ_CP062165.1 Lanthipeptides: JNUCC31_RS17165_lanthipeptideNZ_CP062165.1 Lanthipeptides: JNUCC31_RS17165_lanthipeptideNZ_JACSMH010000008.1 Lanthipeptides: KNP89_RS14470_lanthipeptideNZ_JACSMX010000006.1 Lanthipeptides: KNQ03_RS15615_lanthipeptideNZ_JACSMZ010000005.1 Lanthipeptides: KNQ06_RS16025_lanthipeptideNZ_JAEKEJ010000007.1 Lanthipeptides: JFU02_RS02775_lanthipeptideNZ_JAEKEJ010000007.1 Lanthipeptides: JFU02_RS02780_lanthipeptideNZ_JAMXMK010000009.1 Lanthipeptides: NGM22_RS28050_lanthipeptideNZ_JAMXMK010000009.1 Lanthipeptides: NGM22_RS28050_lanthipeptideNZ_KB946334.1 Lanthipeptides: UC7_RS10230_lanthipeptideNZ_KB946334.1 Lanthipeptides: UC7_RS10250_lanthipeptideNZ_QICW01000005.1 Lanthipeptides: DEU73_RS14625_lanthipeptideNZ_QICW01000005.1 Lanthipeptides: DEU73_RS14625_lanthipeptideNZ_QLLI01000007.1 Lanthipeptides: DET54_RS17330_lanthipeptideNZ_QLLI01000007.1 Lanthipeptides: DET54_RS17330_lanthipeptide

Lanthipeptides: AC241_RS34125_lanthipeptide

2

GEVQPRSTP

10

G+VQP +TP

1

GDVQPETTP

9

12.8% NZ_CP041405.1: Lanthipeptides: FLT43_RS14400_lanthipeptide

3

EVQPRSTPTV

12

+V+PR+TPT+

2

DVEPRATPTI

11

12.8% NZ_FNYB01000007.1and 2 others:

NZ_JAIPUK010000011.1 Lanthipeptides: K9P71_RS27180_lanthipeptideNZ_KB976303.1 Lanthipeptides: IGY_RS27695_lanthipeptide

Lanthipeptides: BMZ34_RS15960_lanthipeptide

2

GEVQPRSTPTVTV

14

G+VQP +TP +

1

GDVQPETTPVCAI

13

12.8% NZ_GG730336.1: Lanthipeptides: SAUG_RS08760_lanthipeptide

2

GEVQPRSTPTVT

13

G V+P++TPT++

2

GTVEPQATPTIS

13

12.8% NZ_JACSPZ010000014.1: Lanthipeptides: H9635_RS18395_lanthipeptide

3

EVQPRSTP

10

E+QP+STP

4

EIQPQSTP

11

10.6% NZ_LT904904.1: Lanthipeptides: C1726_RS21985_lanthipeptide

2

GEVQPRSTPT

11

G++QP +TP+

1

GDIQPNTTPS

10

allorf_0117926_0118033

Leader:

MAKPVHFA

Core:

IRKSAKVRNACKPTKTVLNLNFNHKGT

Core with dehydrations:

IRKDhaAKVRNACysKPDhbKDhbVLNLNFNHKGDhb

antiSMASH-DB 4.0 matches for allorf_0117926_0118033

100.0% NZ_JAKVIH010000006.1and 1 other:

NZ_JAQEOM010000007.1 Lanthipeptides: allorf_77680_77787_lanthipeptide

Lanthipeptides: allorf_44431_44538_lanthipeptide

1

IRKSAKVRNACKPTKTVLNLNFNHKGT

27

IRKSAKVRNACKPTKTVLNLNFNHKGT

1

IRKSAKVRNACKPTKTVLNLNFNHKGT

27

allorf_0124526_0124660

Leader:

MIVALIIFA

Core:

NSLKYFNQSIEQCFTWYHYLFFYFLQTIFSIKNFS

Core with dehydrations:

NDhaLKYFNQDhaIEQCysFDhbWYHYLFFYFLQDhbIFDhaIKNFDha

antiSMASH-DB 4.0 matches for allorf_0124526_0124660

100.0% NZ_JAKVIH010000006.1and 1 other:

NZ_JAQEOM010000007.1 Lanthipeptides: allorf_71033_71167_lanthipeptide

Lanthipeptides: allorf_37804_37938_lanthipeptide

1

NSLKYFNQSIEQCFTWYHYLFFYFLQTIFSIKNFS

35

NSLKYFNQSIEQCFTWYHYLFFYFLQTIFSIKNFS

1

NSLKYFNQSIEQCFTWYHYLFFYFLQTIFSIKNFS

35

allorf_0137719_0137907

Leader:

MIEQDHRPVKRHNKFYRSLRTASTTIKGM

Core:

EAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA

Core with dehydrations:

EAIRGLYKKDhbRKEGDhbLFGFDhaVCysDhbEIKVLLGIPA

antiSMASH-DB 4.0 matches for allorf_0137719_0137907

18.2% NZ_QZFU01000023.1: Lassopeptides: D5S18_RS34950_lassopeptide

10

TRKEGTLFGF

19

T+K+ T FGF

5

TKKDATTFGF

14

12.8% NZ_CP061033.1and 1 other:

NZ_CP061033.1 Lanthipeptides: IAU67_RS09375_lanthipeptide

Lanthipeptides: IAU67_RS09375_lanthipeptide

1

EAIRGLYKKTRKEG

14

+A+RG++++ EG

24

DALRGIFERALNEG

37

11.8% NZ_QRDO01000002.1: Lanthipeptides: allorf_1059653_1059865_lanthipeptide

9

KTRKEGTLFGFS

20

R+ G+L GFS

40

SCRRMGSLLGFS

51

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

ctg1_113 - Class II

Cleavage pHMM score: -0.10

RODEO score: 0

Monoisotopic mass: 4692.6 Da

Molecular weight: 4695.4 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 4713.4 Da N = 1; 4731.4 Da N = 2; 4749.4 Da N = 3; 4767.4 Da N = 4; 4785.5 Da N = 5; 4803.5 Da N = 6; 4821.5 Da N = 7; 4839.5 Da N = 8; 4857.5 Da N = 9; 4875.6 Da N = 10; 4893.6 Da N = 11

allorf_0117926_0118033 - Class II

Cleavage pHMM score: -6.20

RODEO score: 0

Monoisotopic mass: 2965.7 Da

Molecular weight: 2967.5 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2985.5 Da N = 1; 3003.5 Da N = 2; 3021.5 Da N = 3

allorf_0124526_0124660 - Class II

Cleavage pHMM score: -7.10

RODEO score: 0

Monoisotopic mass: 4358.2 Da

Molecular weight: 4360.9 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 4378.9 Da N = 1; 4397.0 Da N = 2; 4415.0 Da N = 3; 4433.0 Da N = 4; 4451.0 Da N = 5

allorf_0137719_0137907 - Class II

Cleavage pHMM score: -6.60

RODEO score: 0

Monoisotopic mass: 3565.0 Da

Molecular weight: 3567.2 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 3585.3 Da N = 1; 3603.3 Da N = 2; 3621.3 Da N = 3

gnlProkkaAKLABAIJ_1 - Region 2 - RiPP-like

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Location: 367,289 - 386,200 nt. (total: 18,912 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAKLABAIJ_1 - Region 3 - RaS-RiPP

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Location: 480,471 - 502,762 nt. (total: 22,292 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAKLABAIJ_1 - Region 4 - RaS-RiPP

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Location: 633,404 - 655,828 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

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KnownClusterBlast

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Similar known gene clusters from MIBiG 3.1

gnlProkkaAKLABAIJ_1 - Region 5 - RaS-RiPP

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Location: 1,086,592 - 1,109,817 nt. (total: 23,226 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

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gnlProkkaAKLABAIJ_1 - Region 6 - RRE-containing

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Location: 1,404,208 - 1,425,341 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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gnlProkkaAKLABAIJ_1 - Region 7 - NRPS-like

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Location: 1,654,628 - 1,697,519 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS domains

KnownClusterBlast

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		NT	AA		NT	AA

Detailed domain annotation

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Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg1_1714

Search NORINE for peptide: strict or relaxed

AMP-binding (6..388): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVTSCALIYK
Nearest Stachelhaus code(s):: Ala DVTNFALIYK (62% 8Å match)
Stachelhaus code match:: 80% (moderate)

gnlProkkaAKLABAIJ_1 - Region 8 - lanthipeptide-class-iv

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Location: 1,859,358 - 1,881,517 nt. (total: 22,160 nt) Show pHMM detection rules used

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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Lanthipeptides

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		NT	AA		NT	AA

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Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.