GCA_039838505.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHJLDPGJB_3 (original name was: gnl|Prokka|HJLDPGJB_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	T3PKS	59,023	100,192

gnlProkkaHJLDPGJB_4 (original name was: gnl|Prokka|HJLDPGJB_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	terpene	26,198	47,079

gnlProkkaHJLDPGJB_5 (original name was: gnl|Prokka|HJLDPGJB_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	cyclic-lactone-autoinducer	8,179	28,884

gnlProkkaHJLDPGJB_7 (original name was: gnl|Prokka|HJLDPGJB_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	110,102	122,252

Region	Type	From	To	Similarity
Region 3.1	T3PKS	59,023	100,192
Region 4.1	terpene	26,198	47,079
Region 5.1	cyclic-lactone-autoinducer	8,179	28,884
Region 7.1	RiPP-like	110,102	122,252

No secondary metabolite regions were found in these records:: gnlProkkaHJLDPGJB_1 (original name was: gnl|Prokka|HJLDPGJB_1); gnlProkkaHJLDPGJB_2 (original name was: gnl|Prokka|HJLDPGJB_2); gnlProkkaHJLDPGJB_6 (original name was: gnl|Prokka|HJLDPGJB_6); gnlProkkaHJLDPGJB_8 (original name was: gnl|Prokka|HJLDPGJB_8); gnlProkkaHJLDPGJB_9 (original name was: gnl|Prokka|HJLDPGJB_9); gnlProkkaHJLDPGJB_10 (original name was: gnl|Prokka|HJLDPGJB_10); gnlProkkaHJLDPGJB_11 (original name was: gnl|Prokka|HJLDPGJB_11); gnlProkkaHJLDPGJB_12 (original name was: gnl|Prokka|HJLDPGJB_12); gnlProkkaHJLDPGJB_13 (original name was: gnl|Prokka|HJLDPGJB_13); gnlProkkaHJLDPGJB_14 (original name was: gnl|Prokka|HJLDPGJB_14); gnlProkkaHJLDPGJB_15 (original name was: gnl|Prokka|HJLDPGJB_15); gnlProkkaHJLDPGJB_16 (original name was: gnl|Prokka|HJLDPGJB_16); gnlProkkaHJLDPGJB_17 (original name was: gnl|Prokka|HJLDPGJB_17); gnlProkkaHJLDPGJB_18 (original name was: gnl|Prokka|HJLDPGJB_18); gnlProkkaHJLDPGJB_19 (original name was: gnl|Prokka|HJLDPGJB_19); gnlProkkaHJLDPGJB_20 (original name was: gnl|Prokka|HJLDPGJB_20); gnlProkkaHJLDPGJB_21 (original name was: gnl|Prokka|HJLDPGJB_21); gnlProkkaHJLDPGJB_22 (original name was: gnl|Prokka|HJLDPGJB_22); gnlProkkaHJLDPGJB_23 (original name was: gnl|Prokka|HJLDPGJB_23); gnlProkkaHJLDPGJB_24 (original name was: gnl|Prokka|HJLDPGJB_24); gnlProkkaHJLDPGJB_25 (original name was: gnl|Prokka|HJLDPGJB_25); gnlProkkaHJLDPGJB_26 (original name was: gnl|Prokka|HJLDPGJB_26); gnlProkkaHJLDPGJB_27 (original name was: gnl|Prokka|HJLDPGJB_27); gnlProkkaHJLDPGJB_28 (original name was: gnl|Prokka|HJLDPGJB_28); gnlProkkaHJLDPGJB_29 (original name was: gnl|Prokka|HJLDPGJB_29); gnlProkkaHJLDPGJB_30 (original name was: gnl|Prokka|HJLDPGJB_30); gnlProkkaHJLDPGJB_31 (original name was: gnl|Prokka|HJLDPGJB_31)

Compact view

gnlProkkaHJLDPGJB_3 - Region 1 - T3PKS

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Location: 59,023 - 100,192 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJLDPGJB_4 - Region 1 - terpene

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Location: 26,198 - 47,079 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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transport-related genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJLDPGJB_5 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,179 - 28,884 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJLDPGJB_7 - Region 1 - RiPP-like

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Location: 110,102 - 122,252 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.