Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	2020-07-09	USA	Homo sapiens	0	2	0	0	2.00
2	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	2020-07-09	USA	Homo sapiens	176	2	0	0	2.00
3	GCA_039913135.1	Bifidobacterium bifidum	RTP21221st1_H4_RTP21221_200709	SAMN31321407	2020-07-09	USA	Homo sapiens	196	2	0	0	2.00
4	GCA_028203535.1	Bifidobacterium bifidum	RTP21221st1_G2_RTP21221_200709	SAMN31321406	2020-07-09	USA	Homo sapiens	237	1	0	0	1.00
5	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	986	2	0	0	2.00
6	GCA_022134905.2	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	-	USA:Chicago	Homo sapiens	988	2	0	0	2.00
7	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	1016	2	0	0	2.00
8	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	-	-	Homo sapiens	1018	2	0	0	2.00
9	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1023	2	0	0	2.00
10	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1023	2	0	0	2.00
11	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1023	2	0	0	2.00
12	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1023	2	0	0	2.00
13	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1025	2	0	0	2.00
14	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1028	2	0	0	2.00
15	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1029	2	0	0	2.00
16	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	2015-08	Thailand: Khon Kean	Homo sapiens	1029	4	0	0	4.00
17	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1029	2	0	0	2.00
18	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1029	2	0	0	2.00
19	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1030	2	0	0	2.00
20	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1030	2	0	0	2.00
21	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1031	2	0	0	2.00
22	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1031	2	0	0	2.00
23	GCA_039913095.1	Bifidobacterium bifidum	RTP21222st1_D12_RTP21222_200807	SAMN31321409	2020-08-07	USA	Homo sapiens	1031	2	0	0	2.00
24	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1032	2	0	0	2.00
25	GCA_039913055.1	Bifidobacterium bifidum	RTP21222st1_F7_RTP21222_200807	SAMN31321411	2020-08-07	USA	Homo sapiens	1033	2	0	0	2.00
26	GCA_039913075.1	Bifidobacterium bifidum	RTP21222st1_F4_RTP21222_200807	SAMN31321410	2020-08-07	USA	Homo sapiens	1033	2	0	0	2.00
27	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1034	2	0	0	2.00
28	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1034	2	0	0	2.00
29	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1034	2	0	0	2.00
30	GCA_039912995.1	Bifidobacterium bifidum	RTP21222st1_H10_RTP21222_200807	SAMN31321412	2020-08-07	USA	Homo sapiens	1034	2	0	0	2.00
31	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1034	2	0	0	2.00
32	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
33	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	2020-09-24	USA	Homo sapiens	1036	2	0	0	2.00
34	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1036	2	0	0	2.00
35	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1037	2	0	0	2.00
36	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
37	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
38	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
39	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1037	2	0	0	2.00
40	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1037	2	0	0	2.00
41	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1037	2	0	0	2.00
42	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1037	2	0	0	2.00
43	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1037	2	0	0	2.00
44	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1037	3	0	0	3.00
45	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1037	3	0	0	3.00
46	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1037	3	0	0	3.00
47	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1037	2	0	0	2.00
48	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1037	2	0	0	2.00
49	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1037	2	0	0	2.00
50	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
51	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
52	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
53	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1037	2	0	0	2.00
54	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1037	3	0	1	3.16
55	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1038	2	0	0	2.00
56	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1038	2	0	0	2.00
57	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1038	2	0	0	2.00
58	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1039	1	0	0	1.00
59	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1039	2	0	0	2.00
60	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1039	2	0	0	2.00
61	GCA_028202675.1	Bifidobacterium bifidum	1001271st1_H11_1001271B_150615	SAMN31321335	2015-06-15	USA	Homo sapiens	1041	3	0	0	3.00
62	GCA_028202815.1	Bifidobacterium bifidum	1001271st1_A6_1001270H_150608	SAMN31321332	2015-06-08	USA	Homo sapiens	1041	3	0	0	3.00
63	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1041	2	0	0	2.00
64	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1042	2	0	0	2.00
65	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1043	2	0	0	2.00
66	GCA_028202735.1	Bifidobacterium bifidum	1001271st1_F2_1001271B_151109	SAMN31321333	2015-11-09	USA	Homo sapiens	1043	3	0	0	3.00
67	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1044	2	0	0	2.00
68	GCA_028202715.1	Bifidobacterium bifidum	1001271st1_G7_1001270J_160509	SAMN31321334	2016-05-09	USA	Homo sapiens	1044	2	0	0	2.00
69	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1046	3	0	0	3.00
70	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	2013-08-01	China: Shenzhen	Homo sapiens	1046	4	0	0	4.00
71	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1048	2	0	0	2.00
72	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	2013	United Kingdom	Homo sapiens	1049	2	0	0	2.00
73	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	2015-01	USA: Cambridge	Homo sapiens	1049	3	0	0	3.00
74	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
75	GCA_009077955.1	Bifidobacterium bifidum	BIOML-A7	SAMN11944597	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
76	GCA_009078065.1	Bifidobacterium bifidum	BIOML-A3	SAMN11944593	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
77	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1049	2	0	0	2.00
78	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1049	2	0	0	2.00
79	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
80	GCA_009075785.1	Bifidobacterium bifidum	BIOML-A1	SAMN11944591	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
81	GCA_009078005.1	Bifidobacterium bifidum	BIOML-A5	SAMN11944595	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
82	GCA_009078015.1	Bifidobacterium bifidum	BIOML-A4	SAMN11944594	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
83	GCA_009078095.1	Bifidobacterium bifidum	BIOML-A9	SAMN11944599	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
84	GCA_009077975.1	Bifidobacterium bifidum	BIOML-A6	SAMN11944596	2015-03-31	USA:Boston	Homo sapiens	1053	3	0	0	3.00
85	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1053	2	0	0	2.00
86	GCA_001020355.1	Bifidobacterium bifidum	85B	SAMN03097398	-	-	Homo sapiens	1054	3	0	0	3.00
87	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	-	Italy	Homo sapiens	1055	2	0	0	2.00
88	GCA_039913195.1	Bifidobacterium bifidum	H3_hBSD2780061687_210209	SAMN31321393	2021-02-09	USA	Homo sapiens	1056	4	0	0	4.00
89	GCA_039913275.1	Bifidobacterium bifidum	F12_hBSD2780061687_210209	SAMN31321391	2021-02-09	USA	Homo sapiens	1056	4	0	0	4.00
90	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	1057	2	0	0	2.00
91	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	1057	2	0	0	2.00
92	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1057	2	0	0	2.00
93	GCA_028203575.1	Bifidobacterium bifidum	F10_hBSD2780061687_210209	SAMN31321389	2021-02-09	USA	Homo sapiens	1057	4	0	0	4.00
94	GCA_039913335.1	Bifidobacterium bifidum	E4_hBSD2780061687_210209	SAMN31321387	2021-02-09	USA	Homo sapiens	1057	4	0	0	4.00
95	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	-	-	Homo sapiens	1058	2	0	0	2.00
96	GCA_028202495.1	Bifidobacterium bifidum	H9_hBSD2780061687_210209	SAMN31321394	2021-02-09	USA	Homo sapiens	1058	4	0	0	4.00
97	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1058	2	0	0	2.00
98	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1058	2	0	0	2.00
99	GCA_049191965.1	Bifidobacterium bifidum	IATA039	SAMN45053952	2022	Spain:Valencia	Homo sapiens	1058	1	0	0	1.00
100	GCA_001020265.1	Bifidobacterium bifidum	IPLA 20017	SAMN03097402	-	-	Homo sapiens	1059	2	0	0	2.00