GCA_039938975.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAIJFJJEK_1 (original name was: gnl|Prokka|AIJFJJEK_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	26,057	46,938

gnlProkkaAIJFJJEK_4 (original name was: gnl|Prokka|AIJFJJEK_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	58,946	100,115

gnlProkkaAIJFJJEK_6 (original name was: gnl|Prokka|AIJFJJEK_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	8,081	28,786

gnlProkkaAIJFJJEK_8 (original name was: gnl|Prokka|AIJFJJEK_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	109,991	122,141

Region	Type	From	To	Similarity
Region 1.1	terpene	26,057	46,938
Region 4.1	T3PKS	58,946	100,115
Region 6.1	cyclic-lactone-autoinducer	8,081	28,786
Region 8.1	RiPP-like	109,991	122,141

No secondary metabolite regions were found in these records:: gnlProkkaAIJFJJEK_2 (original name was: gnl|Prokka|AIJFJJEK_2); gnlProkkaAIJFJJEK_3 (original name was: gnl|Prokka|AIJFJJEK_3); gnlProkkaAIJFJJEK_5 (original name was: gnl|Prokka|AIJFJJEK_5); gnlProkkaAIJFJJEK_7 (original name was: gnl|Prokka|AIJFJJEK_7); gnlProkkaAIJFJJEK_9 (original name was: gnl|Prokka|AIJFJJEK_9); gnlProkkaAIJFJJEK_10 (original name was: gnl|Prokka|AIJFJJEK_10); gnlProkkaAIJFJJEK_11 (original name was: gnl|Prokka|AIJFJJEK_11); gnlProkkaAIJFJJEK_12 (original name was: gnl|Prokka|AIJFJJEK_12); gnlProkkaAIJFJJEK_13 (original name was: gnl|Prokka|AIJFJJEK_13); gnlProkkaAIJFJJEK_14 (original name was: gnl|Prokka|AIJFJJEK_14); gnlProkkaAIJFJJEK_15 (original name was: gnl|Prokka|AIJFJJEK_15); gnlProkkaAIJFJJEK_16 (original name was: gnl|Prokka|AIJFJJEK_16); gnlProkkaAIJFJJEK_17 (original name was: gnl|Prokka|AIJFJJEK_17); gnlProkkaAIJFJJEK_18 (original name was: gnl|Prokka|AIJFJJEK_18); gnlProkkaAIJFJJEK_19 (original name was: gnl|Prokka|AIJFJJEK_19); gnlProkkaAIJFJJEK_20 (original name was: gnl|Prokka|AIJFJJEK_20); gnlProkkaAIJFJJEK_21 (original name was: gnl|Prokka|AIJFJJEK_21); gnlProkkaAIJFJJEK_22 (original name was: gnl|Prokka|AIJFJJEK_22); gnlProkkaAIJFJJEK_23 (original name was: gnl|Prokka|AIJFJJEK_23); gnlProkkaAIJFJJEK_24 (original name was: gnl|Prokka|AIJFJJEK_24); gnlProkkaAIJFJJEK_25 (original name was: gnl|Prokka|AIJFJJEK_25); gnlProkkaAIJFJJEK_26 (original name was: gnl|Prokka|AIJFJJEK_26); gnlProkkaAIJFJJEK_27 (original name was: gnl|Prokka|AIJFJJEK_27); gnlProkkaAIJFJJEK_28 (original name was: gnl|Prokka|AIJFJJEK_28); gnlProkkaAIJFJJEK_29 (original name was: gnl|Prokka|AIJFJJEK_29)

Compact view

gnlProkkaAIJFJJEK_1 - Region 1 - terpene

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Location: 26,057 - 46,938 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAIJFJJEK_4 - Region 1 - T3PKS

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Location: 58,946 - 100,115 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAIJFJJEK_6 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,081 - 28,786 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAIJFJJEK_8 - Region 1 - RiPP-like

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Location: 109,991 - 122,141 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.