GCA_040093925.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEANJBDGJ_8 (original name was: gnl|Prokka|EANJBDGJ_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	lassopeptide	958	23,393

gnlProkkaEANJBDGJ_11 (original name was: gnl|Prokka|EANJBDGJ_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	13,286	23,486
Region 11.2	RiPP-like	94,226	104,459

gnlProkkaEANJBDGJ_31 (original name was: gnl|Prokka|EANJBDGJ_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	129,723	141,819	quinolidomicin A	Polyketide	3%

gnlProkkaEANJBDGJ_36 (original name was: gnl|Prokka|EANJBDGJ_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	T3PKS	28,996	67,312

Region	Type	From	To	Most similar known cluster	Similarity
Region 8.1	lassopeptide	958	23,393
Region 11.1	RiPP-like	13,286	23,486
Region 11.2	RiPP-like	94,226	104,459
Region 23.1	RiPP-like	129,723	141,819	quinolidomicin A	Polyketide	3%
Region 28.1	T3PKS	28,996	67,312

Compact view

gnlProkkaEANJBDGJ_8 - Region 1 - lassopeptide

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Location: 958 - 23,393 nt. (total: 22,436 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaEANJBDGJ_11 - Region 1 - RiPP-like

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Location: 13,286 - 23,486 nt. (total: 10,201 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEANJBDGJ_11 - Region 2 - RiPP-like

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Location: 94,226 - 104,459 nt. (total: 10,234 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEANJBDGJ_31 - Region 1 - RiPP-like

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Location: 129,723 - 141,819 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaEANJBDGJ_36 - Region 1 - T3PKS

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Location: 28,996 - 67,312 nt. (total: 38,317 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.