Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_040536905.1	Lacticaseibacillus paracasei	z15	SAMN42017790	2024-02-15	China:Jilin	-	0	0	0	1	1.00
2	GCA_003712755.1	Lacticaseibacillus paracasei	FAM3257	SAMN04088888	1990	Switzerland	-	571	0	0	2	2.00
3	GCA_005864195.1	Lacticaseibacillus paracasei	FAM 3257	SAMN11653942	1990	Switzerland	-	571	0	0	2	2.00
4	GCA_012241605.1	Lacticaseibacillus paracasei	DTA81	SAMN14517101	2016-10-22	Brazil	Homo sapiens	571	0	0	1	1.00
5	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	580	0	0	2	2.00
6	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	580	0	0	1	1.00
7	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	580	0	0	2	2.00
8	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	581	0	0	1	1.00
9	GCA_025190485.1	Lacticaseibacillus paracasei	CIRM-BIA 1869	SAMN10365453	2015	France	-	581	0	0	2	2.00
10	GCA_000194765.1	Lacticaseibacillus paracasei	BD-II	SAMN02603876	-	China	-	582	0	0	1	1.00
11	GCA_024665815.1	Lacticaseibacillus paracasei subsp. paracasei	01	SAMN29862210	-	-	Homo sapiens	582	0	0	1	1.00
12	GCA_025190575.1	Lacticaseibacillus paracasei	CIRM-BIA 770	SAMN10365448	1971	Japan	-	582	0	0	2	2.00
13	GCA_025190635.1	Lacticaseibacillus paracasei	CIRM-BIA 1444	SAMN10365444	2001	France	-	582	0	0	2	2.00
14	GCA_025190705.1	Lacticaseibacillus paracasei	CIRM-BIA 2130	SAMN10365441	1995	France	-	582	0	0	2	2.00
15	GCA_032290425.1	Lacticaseibacillus paracasei	ASM82903v1	SAMN37553482	2022-10-13	China	Homo sapiens	582	0	0	2	2.00
16	GCA_002849575.1	Lacticaseibacillus paracasei	DUP 13076	SAMN08239980	2013	USA	-	583	0	0	2	2.00
17	GCA_022478075.1	Lacticaseibacillus paracasei	VHProbi F22	SAMN23765140	2019-11-18	China:Inner Mongolia Autonomous Region	-	583	0	0	1	1.00
18	GCA_024999945.1	Lacticaseibacillus paracasei	88	SAMN10365669	2003	-	-	583	0	0	2	2.00
19	GCA_000194785.1	Lacticaseibacillus paracasei	LC2W	SAMN02603877	-	China: Inner Mongolia	-	584	0	0	1	1.00
20	GCA_000409995.1	Lacticaseibacillus paracasei subsp. paracasei Lpp228	Lpp228	SAMN02469720	2008	-	Homo sapiens	584	0	0	2	2.00
21	GCA_003712825.1	Lacticaseibacillus paracasei	FAM8374	SAMN04088896	-	Switzerland	-	584	0	0	2	2.00
22	GCA_011031945.1	Lacticaseibacillus paracasei	VA02-1AN	SAMN14087235	2015-08	Thailand: Khon Kean	Homo sapiens	584	0	0	2	2.00
23	GCA_022614635.1	Lacticaseibacillus paracasei	GMNL-855	SAMN22548462	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	584	0	0	1	1.00
24	GCA_028320445.1	Lacticaseibacillus paracasei	1001095st2_H2_1025SCRN_200924	SAMN31322629	2020-09-24	USA	Homo sapiens	584	0	0	2	2.00
25	GCA_028321445.1	Lacticaseibacillus paracasei	1001095st2_D7_1025SCRN_200924	SAMN31322627	2020-09-24	USA	Homo sapiens	584	0	0	2	2.00
26	GCA_039650495.1	Lacticaseibacillus paracasei	DDS12	SAMN41053268	2023-11-20	India: Tamil Nadu	-	584	0	0	1	1.00
27	GCA_042657205.1	Lacticaseibacillus paracasei	L45	SAMN43851867	-	Thailand: Bangkok	Human (Breastfed infant)	584	0	0	1	1.00
28	GCA_007292115.1	Lacticaseibacillus paracasei	CBA3611	SAMN11890849	2018-11	South Korea: Gwangju	Homo sapiens	585	0	0	1	1.00
29	GCA_008016825.1	Lacticaseibacillus paracasei	SA5	SAMN11812296	2017	Spain	wild boar	585	0	0	2	2.00
30	GCA_025660485.1	Lacticaseibacillus paracasei	PB5	SAMN31096048	2022-08-25	Canada: Ontario	-	585	0	0	2	2.00
31	GCA_028878155.1	Lacticaseibacillus paracasei	DIALYac	SAMN23708207	2012-01-30	Italy	-	585	0	0	2	2.00
32	GCA_000409955.1	Lacticaseibacillus paracasei subsp. paracasei Lpp223	Lpp223	SAMN02469706	2008	-	Homo sapiens	586	0	0	2	2.00
33	GCA_025631055.1	Lacticaseibacillus paracasei	PB6	SAMN31096049	2022-08-25	Canada: Ontario	-	586	0	0	2	2.00
34	GCA_033447265.1	Lacticaseibacillus paracasei	MCC 0258	SAMN38085101	2012-02	India: Maharashtra	-	586	0	0	2	2.00
35	GCA_041734755.1	Lacticaseibacillus paracasei	YGRT25	SAMN43028910	2024-07-12	South Korea	-	586	0	0	1	1.00
36	GCA_000318035.1	Lacticaseibacillus paracasei	W56	SAMEA2271945	-	-	-	587	0	0	1	1.00
37	GCA_000410295.1	Lacticaseibacillus paracasei subsp. paracasei Lpp189	Lpp189	SAMN02469702	2005	-	-	587	0	0	2	2.00
38	GCA_003957435.1	Lacticaseibacillus paracasei subsp. tolerans	AO356	SAMN08200884	2016-10-13	South Korea: Seoul	-	587	0	0	1	1.00
39	GCA_039871405.1	Lacticaseibacillus paracasei	OSY-31	SAMN41462736	2022	USA	-	588	0	0	2	2.00
40	GCA_000409895.1	Lacticaseibacillus paracasei subsp. paracasei Lpp226	Lpp226	SAMN02469716	2009	-	-	592	0	0	2	2.00
41	GCA_000410415.1	Lacticaseibacillus paracasei subsp. paracasei Lpp37	Lpp37	SAMN02469718	1994	-	Homo sapiens	592	0	0	2	2.00
42	GCA_001469115.1	Lacticaseibacillus paracasei	DPC6800	SAMN03840869	2013-02-25	Ireland	-	592	0	0	1	1.00
43	GCA_039838605.1	Lacticaseibacillus paracasei	1001095st2_F6_1025SCRN_200924	SAMN31322628	2020-09-24	USA	Homo sapiens	592	0	0	2	2.00
44	GCA_000410035.1	Lacticaseibacillus paracasei subsp. paracasei Lpp49	Lpp49	SAMN02469726	1996	-	-	595	0	0	2	2.00
45	GCA_000410475.1	Lacticaseibacillus paracasei subsp. paracasei Lpp125	Lpp125	SAMN02641495	2003	-	-	596	0	0	2	2.00
46	GCA_000410215.1	Lacticaseibacillus paracasei subsp. paracasei Lpp229	Lpp229	SAMN02469727	-	-	Homo sapiens	611	0	0	2	2.00
47	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	615	0	0	2	2.00
48	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	634	0	0	1	1.00
49	GCA_000309605.1	Lacticaseibacillus paracasei	32G	SAMN02472010	-	USA: Wisconsin	-	635	0	0	2	2.00
50	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	637	0	0	2	2.00
51	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	637	0	0	2	2.00
52	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	639	0	0	2	2.00
53	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	643	0	0	1	1.00
54	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	643	0	0	2	2.00
55	GCA_022588775.1	Lacticaseibacillus paracasei	BCRC-16100	SAMN22548461	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	645	0	0	1	1.00
56	GCA_025190545.1	Lacticaseibacillus paracasei	CIRM-BIA 2129	SAMN10365447	1993	-	-	645	0	0	2	2.00
57	GCA_028878315.1	Lacticaseibacillus paracasei	DSM 4905	SAMN23708196	2012-01-30	Italy	Homo sapiens	645	0	0	2	2.00
58	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	646	0	0	2	2.00
59	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	646	0	0	2	2.00
60	GCA_025544855.1	Lacticaseibacillus paracasei	M38	SAMN29905902	2019-01	Chile:Santiago	Homo sapiens	646	0	0	2	2.00
61	GCA_034044075.1	Lacticaseibacillus paracasei	MP11A	SAMN37950489	2019-08-19	India: Manipur	-	647	0	0	1	1.00
62	GCA_040459635.1	Lacticaseibacillus paracasei	T0602	SAMN31372287	2020-11-17	Thailand	-	647	0	0	2	2.00
63	GCA_040459685.1	Lacticaseibacillus paracasei	T0601	SAMN31372286	2020-11-17	Thailand	-	647	0	0	2	2.00
64	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	647	0	0	1	1.00
65	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	648	0	0	2	2.00
66	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	648	0	0	1	1.00
67	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	648	0	0	1	1.00
68	GCA_000409815.1	Lacticaseibacillus paracasei subsp. paracasei Lpp230	Lpp230	SAMN02469722	-	-	Homo sapiens	649	0	0	2	2.00
69	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	649	0	0	2	2.00
70	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	649	0	0	1	1.00
71	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	649	0	0	1	1.00
72	GCA_042449115.1	Lacticaseibacillus paracasei subsp. paracasei	SMB092	SAMN43834269	2013	South Korea	-	649	0	0	1	1.00
73	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	650	0	0	2	2.00
74	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	651	0	0	1	1.00
75	GCA_000410115.1	Lacticaseibacillus paracasei subsp. paracasei Lpp48	Lpp48	SAMN02641496	1996	-	-	651	0	0	1	1.00
76	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	651	0	0	1	1.00
77	GCA_022131015.1	Lacticaseibacillus paracasei	CJNU 1877	SAMN21399231	2020-02-25	South Korea	-	651	0	0	2	2.00
78	GCA_022819265.1	Lacticaseibacillus paracasei	SCB0563	SAMN26885627	2013-09-10	China:Guangdong	-	651	0	0	1	1.00
79	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	651	0	0	1	1.00
80	GCA_028878355.1	Lacticaseibacillus paracasei	LMG 25883	SAMN23708195	2012-01-30	Italy	-	651	0	0	2	2.00
81	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	651	0	0	2	2.00
82	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	651	0	0	1	1.00
83	GCA_005049135.1	Lacticaseibacillus paracasei	S49	SAMN11456259	2014	Canada:Lethbridge	Bos taurus	652	0	0	2	2.00
84	GCA_002148875.1	Lacticaseibacillus paracasei	DPC2071	SAMN05949321	1988-11-08	Ireland	-	653	0	0	2	2.00
85	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	653	0	0	1	1.00
86	GCA_002115655.1	Lacticaseibacillus paracasei	DmW_181	SAMN06767179	2013-07	USA: New York	Drosophila	654	0	0	2	2.00
87	GCA_003627255.1	Lacticaseibacillus paracasei	ZFM54	SAMN07305422	2011-08-03	China:Zhejiang maternal and child health hospital	Homo sapiens	654	0	0	1	1.00
88	GCA_025190495.1	Lacticaseibacillus paracasei	CIRM-BIA 288	SAMN10365452	2008	France	-	654	0	0	2	2.00
89	GCA_028609745.1	Lacticaseibacillus paracasei	CLP-Y5	SAMN14686377	2018-12	China	-	654	0	0	1	1.00
90	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	654	0	0	2	2.00
91	GCA_034555155.1	Lacticaseibacillus paracasei	RT4	SAMN38857191	2021	Spain:Galicia	Brachionus plicatilis	654	0	0	2	2.00
92	GCA_000409875.1	Lacticaseibacillus paracasei subsp. paracasei Lpp46	Lpp46	SAMN02469709	1996	-	-	655	0	0	2	2.00
93	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	655	0	0	1	1.00
94	GCA_003966835.1	Lacticaseibacillus paracasei	-	SAMD00094822	-	-	-	655	0	0	1	1.00
95	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	655	0	0	2	2.00
96	GCA_019175405.1	Lacticaseibacillus paracasei subsp. paracasei	GR0548	SAMN18436391	2008-12	Taiwan	-	655	0	0	1	1.00
97	GCA_002901165.3	Lacticaseibacillus paracasei subsp. paracasei	NTU 101	SAMN07445234	2013-09-16	Taiwan:Taipei	Homo sapiens	656	0	0	1	1.00
98	GCA_009739485.1	Lacticaseibacillus paracasei subsp. paracasei	IBB3423	SAMN07167770	2013-09-29	Poland	-	656	0	0	1	1.00
99	GCA_016887785.1	Lacticaseibacillus paracasei	2306	SAMN17562096	2011-06-09	Italy	-	656	0	0	2	2.00
100	GCA_021650835.1	Lacticaseibacillus paracasei subsp. paracasei	GR0562	SAMN25145123	2007-12	Taiwan	Homo sapiens	656	0	0	1	1.00