GCA_040705095.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEMADLOFM_9 (original name was: gnl|Prokka|EMADLOFM_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	84,823	102,794

gnlProkkaEMADLOFM_18 (original name was: gnl|Prokka|EMADLOFM_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	T3PKS	1	28,707

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	RiPP-like	84,823	102,794
Region 18.1	T3PKS	1	28,707

No secondary metabolite regions were found in these records:: gnlProkkaEMADLOFM_1 (original name was: gnl|Prokka|EMADLOFM_1); gnlProkkaEMADLOFM_2 (original name was: gnl|Prokka|EMADLOFM_2); gnlProkkaEMADLOFM_3 (original name was: gnl|Prokka|EMADLOFM_3); gnlProkkaEMADLOFM_4 (original name was: gnl|Prokka|EMADLOFM_4); gnlProkkaEMADLOFM_5 (original name was: gnl|Prokka|EMADLOFM_5); gnlProkkaEMADLOFM_6 (original name was: gnl|Prokka|EMADLOFM_6); gnlProkkaEMADLOFM_7 (original name was: gnl|Prokka|EMADLOFM_7); gnlProkkaEMADLOFM_8 (original name was: gnl|Prokka|EMADLOFM_8); gnlProkkaEMADLOFM_10 (original name was: gnl|Prokka|EMADLOFM_10); gnlProkkaEMADLOFM_11 (original name was: gnl|Prokka|EMADLOFM_11); gnlProkkaEMADLOFM_12 (original name was: gnl|Prokka|EMADLOFM_12); gnlProkkaEMADLOFM_13 (original name was: gnl|Prokka|EMADLOFM_13); gnlProkkaEMADLOFM_14 (original name was: gnl|Prokka|EMADLOFM_14); gnlProkkaEMADLOFM_15 (original name was: gnl|Prokka|EMADLOFM_15); gnlProkkaEMADLOFM_16 (original name was: gnl|Prokka|EMADLOFM_16); gnlProkkaEMADLOFM_17 (original name was: gnl|Prokka|EMADLOFM_17); gnlProkkaEMADLOFM_19 (original name was: gnl|Prokka|EMADLOFM_19); gnlProkkaEMADLOFM_20 (original name was: gnl|Prokka|EMADLOFM_20); gnlProkkaEMADLOFM_21 (original name was: gnl|Prokka|EMADLOFM_21); gnlProkkaEMADLOFM_22 (original name was: gnl|Prokka|EMADLOFM_22); gnlProkkaEMADLOFM_23 (original name was: gnl|Prokka|EMADLOFM_23); gnlProkkaEMADLOFM_24 (original name was: gnl|Prokka|EMADLOFM_24); gnlProkkaEMADLOFM_25 (original name was: gnl|Prokka|EMADLOFM_25); gnlProkkaEMADLOFM_26 (original name was: gnl|Prokka|EMADLOFM_26); gnlProkkaEMADLOFM_27 (original name was: gnl|Prokka|EMADLOFM_27); gnlProkkaEMADLOFM_28 (original name was: gnl|Prokka|EMADLOFM_28); gnlProkkaEMADLOFM_29 (original name was: gnl|Prokka|EMADLOFM_29); gnlProkkaEMADLOFM_30 (original name was: gnl|Prokka|EMADLOFM_30); gnlProkkaEMADLOFM_31 (original name was: gnl|Prokka|EMADLOFM_31)

Compact view

gnlProkkaEMADLOFM_9 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 84,823 - 102,794 nt. (total: 17,972 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEMADLOFM_18 - Region 1 - T3PKS