GCA_040705195.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAJIKHOKB_1 (original name was: gnl|Prokka|AJIKHOKB_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	104,204	116,354

gnlProkkaAJIKHOKB_2 (original name was: gnl|Prokka|AJIKHOKB_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	1	35,300

gnlProkkaAJIKHOKB_6 (original name was: gnl|Prokka|AJIKHOKB_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	9,246	29,951

gnlProkkaAJIKHOKB_11 (original name was: gnl|Prokka|AJIKHOKB_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	26,090	46,971

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	104,204	116,354
Region 2.1	T3PKS	1	35,300
Region 6.1	cyclic-lactone-autoinducer	9,246	29,951
Region 11.1	terpene	26,090	46,971

No secondary metabolite regions were found in these records:: gnlProkkaAJIKHOKB_3 (original name was: gnl|Prokka|AJIKHOKB_3); gnlProkkaAJIKHOKB_4 (original name was: gnl|Prokka|AJIKHOKB_4); gnlProkkaAJIKHOKB_5 (original name was: gnl|Prokka|AJIKHOKB_5); gnlProkkaAJIKHOKB_7 (original name was: gnl|Prokka|AJIKHOKB_7); gnlProkkaAJIKHOKB_8 (original name was: gnl|Prokka|AJIKHOKB_8); gnlProkkaAJIKHOKB_9 (original name was: gnl|Prokka|AJIKHOKB_9); gnlProkkaAJIKHOKB_10 (original name was: gnl|Prokka|AJIKHOKB_10); gnlProkkaAJIKHOKB_12 (original name was: gnl|Prokka|AJIKHOKB_12); gnlProkkaAJIKHOKB_13 (original name was: gnl|Prokka|AJIKHOKB_13); gnlProkkaAJIKHOKB_14 (original name was: gnl|Prokka|AJIKHOKB_14); gnlProkkaAJIKHOKB_15 (original name was: gnl|Prokka|AJIKHOKB_15); gnlProkkaAJIKHOKB_16 (original name was: gnl|Prokka|AJIKHOKB_16); gnlProkkaAJIKHOKB_17 (original name was: gnl|Prokka|AJIKHOKB_17); gnlProkkaAJIKHOKB_18 (original name was: gnl|Prokka|AJIKHOKB_18); gnlProkkaAJIKHOKB_19 (original name was: gnl|Prokka|AJIKHOKB_19); gnlProkkaAJIKHOKB_20 (original name was: gnl|Prokka|AJIKHOKB_20); gnlProkkaAJIKHOKB_21 (original name was: gnl|Prokka|AJIKHOKB_21); gnlProkkaAJIKHOKB_22 (original name was: gnl|Prokka|AJIKHOKB_22)

Compact view

gnlProkkaAJIKHOKB_1 - Region 1 - RiPP-like

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Location: 104,204 - 116,354 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAJIKHOKB_2 - Region 1 - T3PKS

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Location: 1 - 35,300 nt. (total: 35,300 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAJIKHOKB_6 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,246 - 29,951 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAJIKHOKB_11 - Region 1 - terpene

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Location: 26,090 - 46,971 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.