GCA_040785225.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKFGGFHJF_1 (original name was: gnl|Prokka|KFGGFHJF_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	76,192	97,073

gnlProkkaKFGGFHJF_11 (original name was: gnl|Prokka|KFGGFHJF_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	623,907	665,076

gnlProkkaKFGGFHJF_15 (original name was: gnl|Prokka|KFGGFHJF_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	102,708	114,858
Region 12.2	cyclic-lactone-autoinducer	518,389	539,094

Region	Type	From	To	Similarity
Region 1.1	terpene	76,192	97,073
Region 11.1	T3PKS	623,907	665,076
Region 12.1	RiPP-like	102,708	114,858
Region 12.2	cyclic-lactone-autoinducer	518,389	539,094

No secondary metabolite regions were found in these records:: gnlProkkaKFGGFHJF_2 (original name was: gnl|Prokka|KFGGFHJF_2); gnlProkkaKFGGFHJF_3 (original name was: gnl|Prokka|KFGGFHJF_3); gnlProkkaKFGGFHJF_4 (original name was: gnl|Prokka|KFGGFHJF_4); gnlProkkaKFGGFHJF_5 (original name was: gnl|Prokka|KFGGFHJF_5); gnlProkkaKFGGFHJF_6 (original name was: gnl|Prokka|KFGGFHJF_6); gnlProkkaKFGGFHJF_7 (original name was: gnl|Prokka|KFGGFHJF_7); gnlProkkaKFGGFHJF_8 (original name was: gnl|Prokka|KFGGFHJF_8); gnlProkkaKFGGFHJF_9 (original name was: gnl|Prokka|KFGGFHJF_9); gnlProkkaKFGGFHJF_10 (original name was: gnl|Prokka|KFGGFHJF_10); gnlProkkaKFGGFHJF_16 (original name was: gnl|Prokka|KFGGFHJF_16); gnlProkkaKFGGFHJF_17 (original name was: gnl|Prokka|KFGGFHJF_17); gnlProkkaKFGGFHJF_18 (original name was: gnl|Prokka|KFGGFHJF_18); gnlProkkaKFGGFHJF_19 (original name was: gnl|Prokka|KFGGFHJF_19); gnlProkkaKFGGFHJF_20 (original name was: gnl|Prokka|KFGGFHJF_20); gnlProkkaKFGGFHJF_21 (original name was: gnl|Prokka|KFGGFHJF_21); gnlProkkaKFGGFHJF_22 (original name was: gnl|Prokka|KFGGFHJF_22)

Compact view

gnlProkkaKFGGFHJF_1 - Region 1 - terpene

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Location: 76,192 - 97,073 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFGGFHJF_11 - Region 1 - T3PKS

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Location: 623,907 - 665,076 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFGGFHJF_15 - Region 1 - RiPP-like

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Location: 102,708 - 114,858 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFGGFHJF_15 - Region 2 - cyclic-lactone-autoinducer

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Location: 518,389 - 539,094 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.