GCA_040883415.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKIMKDPNP_1 (original name was: gnl|Prokka|KIMKDPNP_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	85,057	91,652

gnlProkkaKIMKDPNP_9 (original name was: gnl|Prokka|KIMKDPNP_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	T3PKS	272,799	313,971

gnlProkkaKIMKDPNP_11 (original name was: gnl|Prokka|KIMKDPNP_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	1,234	11,419

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	85,057	91,652
Region 9.1	T3PKS	272,799	313,971
Region 11.1	RiPP-like	1,234	11,419

No secondary metabolite regions were found in these records:: gnlProkkaKIMKDPNP_2 (original name was: gnl|Prokka|KIMKDPNP_2); gnlProkkaKIMKDPNP_3 (original name was: gnl|Prokka|KIMKDPNP_3); gnlProkkaKIMKDPNP_4 (original name was: gnl|Prokka|KIMKDPNP_4); gnlProkkaKIMKDPNP_5 (original name was: gnl|Prokka|KIMKDPNP_5); gnlProkkaKIMKDPNP_6 (original name was: gnl|Prokka|KIMKDPNP_6); gnlProkkaKIMKDPNP_7 (original name was: gnl|Prokka|KIMKDPNP_7); gnlProkkaKIMKDPNP_8 (original name was: gnl|Prokka|KIMKDPNP_8); gnlProkkaKIMKDPNP_10 (original name was: gnl|Prokka|KIMKDPNP_10); gnlProkkaKIMKDPNP_12 (original name was: gnl|Prokka|KIMKDPNP_12); gnlProkkaKIMKDPNP_13 (original name was: gnl|Prokka|KIMKDPNP_13); gnlProkkaKIMKDPNP_14 (original name was: gnl|Prokka|KIMKDPNP_14); gnlProkkaKIMKDPNP_15 (original name was: gnl|Prokka|KIMKDPNP_15); gnlProkkaKIMKDPNP_16 (original name was: gnl|Prokka|KIMKDPNP_16); gnlProkkaKIMKDPNP_17 (original name was: gnl|Prokka|KIMKDPNP_17); gnlProkkaKIMKDPNP_18 (original name was: gnl|Prokka|KIMKDPNP_18); gnlProkkaKIMKDPNP_19 (original name was: gnl|Prokka|KIMKDPNP_19); gnlProkkaKIMKDPNP_20 (original name was: gnl|Prokka|KIMKDPNP_20); gnlProkkaKIMKDPNP_21 (original name was: gnl|Prokka|KIMKDPNP_21); gnlProkkaKIMKDPNP_22 (original name was: gnl|Prokka|KIMKDPNP_22); gnlProkkaKIMKDPNP_23 (original name was: gnl|Prokka|KIMKDPNP_23); gnlProkkaKIMKDPNP_24 (original name was: gnl|Prokka|KIMKDPNP_24); gnlProkkaKIMKDPNP_25 (original name was: gnl|Prokka|KIMKDPNP_25); gnlProkkaKIMKDPNP_26 (original name was: gnl|Prokka|KIMKDPNP_26); gnlProkkaKIMKDPNP_27 (original name was: gnl|Prokka|KIMKDPNP_27); gnlProkkaKIMKDPNP_28 (original name was: gnl|Prokka|KIMKDPNP_28); gnlProkkaKIMKDPNP_29 (original name was: gnl|Prokka|KIMKDPNP_29); gnlProkkaKIMKDPNP_30 (original name was: gnl|Prokka|KIMKDPNP_30)

Compact view

gnlProkkaKIMKDPNP_1 - Region 1 - RiPP-like

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Location: 85,057 - 91,652 nt. (total: 6,596 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKIMKDPNP_9 - Region 1 - T3PKS

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Location: 272,799 - 313,971 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKIMKDPNP_11 - Region 1 - RiPP-like

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Location: 1,234 - 11,419 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.