GCA_040883435.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKNAAAHMB_10 (original name was: gnl|Prokka|KNAAAHMB_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	lanthipeptide-class-iv	49,628	71,823

gnlProkkaKNAAAHMB_12 (original name was: gnl|Prokka|KNAAAHMB_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	32,487	43,677

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	lanthipeptide-class-iv	49,628	71,823
Region 12.1	RiPP-like	32,487	43,677

No secondary metabolite regions were found in these records:: gnlProkkaKNAAAHMB_1 (original name was: gnl|Prokka|KNAAAHMB_1); gnlProkkaKNAAAHMB_2 (original name was: gnl|Prokka|KNAAAHMB_2); gnlProkkaKNAAAHMB_3 (original name was: gnl|Prokka|KNAAAHMB_3); gnlProkkaKNAAAHMB_4 (original name was: gnl|Prokka|KNAAAHMB_4); gnlProkkaKNAAAHMB_5 (original name was: gnl|Prokka|KNAAAHMB_5); gnlProkkaKNAAAHMB_6 (original name was: gnl|Prokka|KNAAAHMB_6); gnlProkkaKNAAAHMB_7 (original name was: gnl|Prokka|KNAAAHMB_7); gnlProkkaKNAAAHMB_8 (original name was: gnl|Prokka|KNAAAHMB_8); gnlProkkaKNAAAHMB_9 (original name was: gnl|Prokka|KNAAAHMB_9); gnlProkkaKNAAAHMB_11 (original name was: gnl|Prokka|KNAAAHMB_11); gnlProkkaKNAAAHMB_13 (original name was: gnl|Prokka|KNAAAHMB_13); gnlProkkaKNAAAHMB_14 (original name was: gnl|Prokka|KNAAAHMB_14); gnlProkkaKNAAAHMB_15 (original name was: gnl|Prokka|KNAAAHMB_15); gnlProkkaKNAAAHMB_16 (original name was: gnl|Prokka|KNAAAHMB_16); gnlProkkaKNAAAHMB_17 (original name was: gnl|Prokka|KNAAAHMB_17); gnlProkkaKNAAAHMB_18 (original name was: gnl|Prokka|KNAAAHMB_18); gnlProkkaKNAAAHMB_19 (original name was: gnl|Prokka|KNAAAHMB_19); gnlProkkaKNAAAHMB_20 (original name was: gnl|Prokka|KNAAAHMB_20); gnlProkkaKNAAAHMB_21 (original name was: gnl|Prokka|KNAAAHMB_21); gnlProkkaKNAAAHMB_22 (original name was: gnl|Prokka|KNAAAHMB_22); gnlProkkaKNAAAHMB_23 (original name was: gnl|Prokka|KNAAAHMB_23); gnlProkkaKNAAAHMB_24 (original name was: gnl|Prokka|KNAAAHMB_24); gnlProkkaKNAAAHMB_25 (original name was: gnl|Prokka|KNAAAHMB_25); gnlProkkaKNAAAHMB_26 (original name was: gnl|Prokka|KNAAAHMB_26); gnlProkkaKNAAAHMB_27 (original name was: gnl|Prokka|KNAAAHMB_27); gnlProkkaKNAAAHMB_28 (original name was: gnl|Prokka|KNAAAHMB_28); gnlProkkaKNAAAHMB_29 (original name was: gnl|Prokka|KNAAAHMB_29); gnlProkkaKNAAAHMB_30 (original name was: gnl|Prokka|KNAAAHMB_30); gnlProkkaKNAAAHMB_31 (original name was: gnl|Prokka|KNAAAHMB_31); gnlProkkaKNAAAHMB_32 (original name was: gnl|Prokka|KNAAAHMB_32); gnlProkkaKNAAAHMB_33 (original name was: gnl|Prokka|KNAAAHMB_33); gnlProkkaKNAAAHMB_34 (original name was: gnl|Prokka|KNAAAHMB_34); gnlProkkaKNAAAHMB_35 (original name was: gnl|Prokka|KNAAAHMB_35); gnlProkkaKNAAAHMB_36 (original name was: gnl|Prokka|KNAAAHMB_36); gnlProkkaKNAAAHMB_37 (original name was: gnl|Prokka|KNAAAHMB_37); gnlProkkaKNAAAHMB_38 (original name was: gnl|Prokka|KNAAAHMB_38); gnlProkkaKNAAAHMB_39 (original name was: gnl|Prokka|KNAAAHMB_39); gnlProkkaKNAAAHMB_40 (original name was: gnl|Prokka|KNAAAHMB_40); gnlProkkaKNAAAHMB_41 (original name was: gnl|Prokka|KNAAAHMB_41); gnlProkkaKNAAAHMB_42 (original name was: gnl|Prokka|KNAAAHMB_42); gnlProkkaKNAAAHMB_43 (original name was: gnl|Prokka|KNAAAHMB_43); gnlProkkaKNAAAHMB_44 (original name was: gnl|Prokka|KNAAAHMB_44); gnlProkkaKNAAAHMB_45 (original name was: gnl|Prokka|KNAAAHMB_45); gnlProkkaKNAAAHMB_46 (original name was: gnl|Prokka|KNAAAHMB_46); gnlProkkaKNAAAHMB_47 (original name was: gnl|Prokka|KNAAAHMB_47); gnlProkkaKNAAAHMB_48 (original name was: gnl|Prokka|KNAAAHMB_48); gnlProkkaKNAAAHMB_49 (original name was: gnl|Prokka|KNAAAHMB_49)

Compact view

gnlProkkaKNAAAHMB_10 - Region 1 - lanthipeptide-class-iv

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Location: 49,628 - 71,823 nt. (total: 22,196 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaKNAAAHMB_12 - Region 1 - RiPP-like

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Location: 32,487 - 43,677 nt. (total: 11,191 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.