GCA_041431855.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNABPDDFC_1 (original name was: gnl|Prokka|NABPDDFC_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	147,581	170,386

gnlProkkaNABPDDFC_3 (original name was: gnl|Prokka|NABPDDFC_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	123,669	133,965

gnlProkkaNABPDDFC_12 (original name was: gnl|Prokka|NABPDDFC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	72,744	81,053	quinolidomicin A	Polyketide	3%

gnlProkkaNABPDDFC_16 (original name was: gnl|Prokka|NABPDDFC_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	T3PKS	1	27,465

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RiPP-like	147,581	170,386
Region 3.1	RiPP-like	123,669	133,965
Region 12.1	RiPP-like	72,744	81,053	quinolidomicin A	Polyketide	3%
Region 16.1	T3PKS	1	27,465

No secondary metabolite regions were found in these records:: gnlProkkaNABPDDFC_2 (original name was: gnl|Prokka|NABPDDFC_2); gnlProkkaNABPDDFC_4 (original name was: gnl|Prokka|NABPDDFC_4); gnlProkkaNABPDDFC_5 (original name was: gnl|Prokka|NABPDDFC_5); gnlProkkaNABPDDFC_6 (original name was: gnl|Prokka|NABPDDFC_6); gnlProkkaNABPDDFC_7 (original name was: gnl|Prokka|NABPDDFC_7); gnlProkkaNABPDDFC_8 (original name was: gnl|Prokka|NABPDDFC_8); gnlProkkaNABPDDFC_9 (original name was: gnl|Prokka|NABPDDFC_9); gnlProkkaNABPDDFC_10 (original name was: gnl|Prokka|NABPDDFC_10); gnlProkkaNABPDDFC_11 (original name was: gnl|Prokka|NABPDDFC_11); gnlProkkaNABPDDFC_13 (original name was: gnl|Prokka|NABPDDFC_13); gnlProkkaNABPDDFC_14 (original name was: gnl|Prokka|NABPDDFC_14); gnlProkkaNABPDDFC_15 (original name was: gnl|Prokka|NABPDDFC_15); gnlProkkaNABPDDFC_17 (original name was: gnl|Prokka|NABPDDFC_17); gnlProkkaNABPDDFC_18 (original name was: gnl|Prokka|NABPDDFC_18); gnlProkkaNABPDDFC_19 (original name was: gnl|Prokka|NABPDDFC_19); gnlProkkaNABPDDFC_20 (original name was: gnl|Prokka|NABPDDFC_20); gnlProkkaNABPDDFC_21 (original name was: gnl|Prokka|NABPDDFC_21); gnlProkkaNABPDDFC_22 (original name was: gnl|Prokka|NABPDDFC_22); gnlProkkaNABPDDFC_23 (original name was: gnl|Prokka|NABPDDFC_23); gnlProkkaNABPDDFC_24 (original name was: gnl|Prokka|NABPDDFC_24); gnlProkkaNABPDDFC_25 (original name was: gnl|Prokka|NABPDDFC_25); gnlProkkaNABPDDFC_26 (original name was: gnl|Prokka|NABPDDFC_26); gnlProkkaNABPDDFC_27 (original name was: gnl|Prokka|NABPDDFC_27); gnlProkkaNABPDDFC_28 (original name was: gnl|Prokka|NABPDDFC_28); gnlProkkaNABPDDFC_29 (original name was: gnl|Prokka|NABPDDFC_29); gnlProkkaNABPDDFC_30 (original name was: gnl|Prokka|NABPDDFC_30); gnlProkkaNABPDDFC_31 (original name was: gnl|Prokka|NABPDDFC_31)

Compact view

gnlProkkaNABPDDFC_1 - Region 1 - RiPP-like

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Location: 147,581 - 170,386 nt. (total: 22,806 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNABPDDFC_3 - Region 1 - RiPP-like

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Location: 123,669 - 133,965 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNABPDDFC_12 - Region 1 - RiPP-like

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Location: 72,744 - 81,053 nt. (total: 8,310 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaNABPDDFC_16 - Region 1 - T3PKS

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Location: 1 - 27,465 nt. (total: 27,465 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.