Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_041514275.1	Streptococcus thermophilus	S24734	SAMN18478709	2019	Switzerland	-	0	0	25	29	38.29
2	GCA_041514355.1	Streptococcus thermophilus	S24724	SAMN18478703	2019	Switzerland	-	8	0	25	29	38.29
3	GCA_042187345.1	Streptococcus thermophilus	S24725	SAMN18490521	2019	Switzerland	-	9	0	25	33	41.40
4	GCA_025127295.1	Streptococcus thermophilus	976	SAMN10365140	1981	Switzerland	-	13	0	25	33	41.40
5	GCA_003402855.1	Streptococcus thermophilus	ST109	SAMN09715176	-	USA:ERRC at Wyndmoor, PA	-	48	0	25	29	38.29
6	GCA_025186885.1	Streptococcus thermophilus	CIRM-BIA 2102	SAMN10365656	1950	Finland	-	149	0	24	32	40.00
7	GCA_025187325.1	Streptococcus thermophilus	CIRM-BIA 1046	SAMN10365644	1971	Japan	-	473	0	26	33	42.01
8	GCA_903890795.1	Streptococcus thermophilus	-	SAMEA6957273	1971	Japan	-	473	0	26	29	38.95
9	GCA_025948295.1	Streptococcus thermophilus	CNRZ385	SAMN16933252	1993	Ireland	-	474	0	26	29	38.95
10	GCA_020829055.1	Streptococcus thermophilus	B4	SAMN18713779	2019	Ireland: Cork	-	490	0	22	33	39.66
11	GCA_020829085.1	Streptococcus thermophilus	B2	SAMN18523655	2019	Ireland: Cork City	-	490	0	22	33	39.66
12	GCA_020829095.1	Streptococcus thermophilus	B9	SAMN18713787	2020	Ireland: Cork	-	490	0	22	33	39.66
13	GCA_020844005.1	Streptococcus thermophilus	4078	SAMN16933231	1996	Ireland	-	490	0	22	29	36.40
14	GCA_903891025.1	Streptococcus thermophilus	-	SAMEA6957279	1990	France	-	490	0	22	29	36.40
15	GCA_000182875.1	Streptococcus thermophilus ND03	ND03	SAMN02603938	-	-	-	491	0	22	29	36.40
16	GCA_002012365.1	Streptococcus thermophilus	APC151	SAMN06349996	2015-02-13	Ireland	fish	491	0	22	29	36.40
17	GCA_005864465.1	Streptococcus thermophilus	FAM 13496	SAMN11653956	1988	Switzerland	-	491	0	25	33	41.40
18	GCA_017367105.1	Streptococcus thermophilus	13497	SAMN15923540	1984	Switzerland	-	491	0	25	33	41.40
19	GCA_020829125.1	Streptococcus thermophilus	B1	SAMN18523653	2019	Ireland: Cork city	-	491	0	22	33	39.66
20	GCA_025187665.1	Streptococcus thermophilus	CIRM-BIA 1055	SAMN10365626	1990	France	-	491	0	22	33	39.66
21	GCA_001266475.1	Streptococcus thermophilus	KLDS3.1012	SAMN03957073	2009-02-02	China: Inner Mongolia	-	492	0	22	29	36.40
22	GCA_003129655.1	Streptococcus thermophilus	KU30	SAMN09099014	2009-10-01	China:Hebei	-	492	0	22	32	38.83
23	GCA_017360005.1	Streptococcus thermophilus	24739	SAMN15923548	1984	Switzerland	-	492	0	25	29	38.29
24	GCA_017360305.1	Streptococcus thermophilus	13496	SAMN15923539	1984	Switzerland	-	492	0	25	29	38.29
25	GCA_025127245.1	Streptococcus thermophilus	980	SAMN10365144	1981	Switzerland	-	492	0	27	35	44.20
26	GCA_025129195.1	Streptococcus thermophilus	977	SAMN10365141	1981	Switzerland	-	492	0	27	35	44.20
27	GCA_025132855.1	Streptococcus thermophilus	973	SAMN10365138	1980	Switzerland	-	492	0	27	35	44.20
28	GCA_041509385.1	Streptococcus thermophilus	S24750	SAMN18478718	2019	Switzerland	-	492	0	27	31	41.11
29	GCA_041514285.1	Streptococcus thermophilus	S24733	SAMN18478708	2019	Switzerland	-	492	0	27	31	41.11
30	GCA_041514295.1	Streptococcus thermophilus	S24732	SAMN18478707	2019	Switzerland	-	492	0	27	31	41.11
31	GCA_041893975.1	Streptococcus thermophilus	S24748	SAMN18490527	2019	Switzerland	-	492	0	27	31	41.11
32	GCA_042187295.1	Streptococcus thermophilus	S24731	SAMN18490524	2019	Switzerland	-	492	0	27	35	44.20
33	GCA_019449755.1	Streptococcus thermophilus	Brie1	SAMN19116153	2020-11-09	Ireland	-	493	0	22	33	39.66
34	GCA_020075895.1	Streptococcus thermophilus	CF2_14	SAMN06464117	2016-10-15	USA:MD	Homo sapiens	493	0	22	33	39.66
35	GCA_025132835.1	Streptococcus thermophilus	974	SAMN10365139	1980	Switzerland	-	493	0	27	35	44.20
36	GCA_025127235.1	Streptococcus thermophilus	979	SAMN10365143	1981	Switzerland	-	494	0	27	35	44.20
37	GCA_025127255.1	Streptococcus thermophilus	978	SAMN10365142	1981	Switzerland	-	495	0	27	35	44.20
38	GCA_025187465.1	Streptococcus thermophilus	CIRM-BIA 1058	SAMN10365637	1995	France	-	495	0	22	33	39.66
39	GCA_029523265.1	Streptococcus thermophilus	MGA45-4	SAMN26185813	2009	China:Hohhot	-	499	0	26	33	42.01
40	GCA_017367165.1	Streptococcus thermophilus	13495	SAMN15923538	1984	Switzerland	-	503	0	25	30	39.05
41	GCA_019449885.1	Streptococcus thermophilus	Nect1	SAMN19136548	2020-11-09	Ireland	-	504	0	25	33	41.40
42	GCA_000262675.1	Streptococcus thermophilus MN-ZLW-002	MN-ZLW-002	SAMN02603848	-	China: Gannan region of Gansu province	-	505	0	25	29	38.29
43	GCA_020075985.1	Streptococcus thermophilus	CF10_14	SAMN15078596	2018-03-12	USA:MD	Homo sapiens	505	0	24	33	40.80
44	GCA_025186765.1	Streptococcus thermophilus	CIRM-BIA 1051	SAMN10365658	1974	Mongolia	-	506	0	25	32	40.61
45	GCA_903891015.1	Streptococcus thermophilus	-	SAMEA6957278	1974	Mongolia	-	506	0	25	28	37.54
46	GCA_023278025.1	Streptococcus thermophilus	VHProbi R08	SAMN27162337	2021-01-25	China:Qingdao	Homo sapiens	507	0	25	29	38.29
47	GCA_001280285.1	Streptococcus thermophilus	MN-BM-A01	SAMN04002535	2012-09-15	China: Gansu	-	515	0	25	29	38.29
48	GCA_041514335.1	Streptococcus thermophilus	S24728	SAMN18478705	2019	Switzerland	-	518	0	26	28	38.21
49	GCA_041514345.1	Streptococcus thermophilus	S24726	SAMN18478704	2019	Switzerland	-	518	0	26	29	38.95
50	GCA_042187335.1	Streptococcus thermophilus	S24727	SAMN18490522	2019	Switzerland	-	518	0	26	33	42.01
51	GCA_041514325.1	Streptococcus thermophilus	S24730	SAMN18478706	2019	Switzerland	-	519	0	28	28	39.60
52	GCA_042187285.1	Streptococcus thermophilus	S24729	SAMN18490523	2019	Switzerland	-	519	0	28	32	42.52
53	GCA_041510115.1	Streptococcus thermophilus	S24749	SAMN18478717	2019	Switzerland	-	521	0	28	29	40.31
54	GCA_019449795.1	Streptococcus thermophilus	Rico65	SAMN19116208	2020-11-09	Ireland	-	522	0	21	33	39.12
55	GCA_025187495.1	Streptococcus thermophilus	CIRM-BIA 1363	SAMN10365634	1993	France	-	522	0	20	33	38.59
56	GCA_039783255.1	Streptococcus thermophilus	MM1	SAMN16933240	2017	Ireland	-	522	0	22	28	35.61
57	GCA_041510825.1	Streptococcus thermophilus	S24747	SAMN18478716	2019	Switzerland	-	522	0	28	29	40.31
58	GCA_001867185.1	Streptococcus thermophilus	UC8547del3	SAMN05463221	2010	Italy: Piacenza	-	523	0	18	33	37.59
59	GCA_001867245.1	Streptococcus thermophilus	UC8547	SAMN05463208	2005	Italy: Como	-	524	0	18	33	37.59
60	GCA_045159865.1	Streptococcus thermophilus	RR	SAMN16933251	1995	Ireland	-	527	0	22	28	35.61
61	GCA_020076085.1	Streptococcus thermophilus	CF3_14	SAMN15078635	2018-03-12	USA:MD	Homo sapiens	529	0	22	33	39.66
62	GCA_041512205.1	Streptococcus thermophilus	S24745	SAMN18478714	2019	Switzerland	-	529	0	25	29	38.29
63	GCA_025187085.1	Streptococcus thermophilus	CIRM-BIA 1035	SAMN10365651	1973	France	-	530	0	25	33	41.40
64	GCA_903890815.1	Streptococcus thermophilus	-	SAMEA6957272	1973	France	-	530	0	25	29	38.29
65	GCA_017360085.1	Streptococcus thermophilus	24738	SAMN15923547	2019	Switzerland	-	531	0	25	28	37.54
66	GCA_017360165.1	Streptococcus thermophilus	13499	SAMN15923544	1984	Switzerland	-	531	0	25	29	38.29
67	GCA_017367115.1	Streptococcus thermophilus	13499c1	SAMN15923542	1984	Switzerland	-	531	0	25	33	41.40
68	GCA_017359885.1	Streptococcus thermophilus	24740	SAMN15923549	2019	Switzerland	-	532	0	25	29	38.29
69	GCA_017367015.1	Streptococcus thermophilus	S50	SAMN15923553	2019	Switzerland	-	532	0	25	33	41.40
70	GCA_042187225.1	Streptococcus thermophilus	S24744	SAMN18490526	2019	Switzerland	-	532	0	25	33	41.40
71	GCA_017367085.1	Streptococcus thermophilus	13499c2	SAMN15923543	1984	Switzerland	-	533	0	25	33	41.40
72	GCA_025187585.1	Streptococcus thermophilus	CIRM-BIA 1860	SAMN10365630	1979	Austria	-	540	0	23	33	40.22
73	GCA_025187305.1	Streptococcus thermophilus	CIRM-BIA 32	SAMN10365643	1964	France	-	544	0	18	33	37.59
74	GCA_025187365.1	Streptococcus thermophilus	CIRM-BIA 18	SAMN10365640	1964	France	-	544	0	18	33	37.59
75	GCA_903885985.1	Streptococcus thermophilus	-	SAMEA6957286	1964	France	-	544	0	18	29	34.13
76	GCA_903886345.1	Streptococcus thermophilus	-	SAMEA6957292	1964	France	-	544	0	18	29	34.13
77	GCA_039783625.1	Streptococcus thermophilus	CNRZ302	SAMN16933247	1995	Ireland	-	546	0	18	29	34.13
78	GCA_025187005.1	Streptococcus thermophilus	CIRM-BIA 1358	SAMN10365653	1974	France	-	553	0	28	32	42.52
79	GCA_903891245.1	Streptococcus thermophilus	-	SAMEA6957284	1974	France	-	553	0	28	28	39.60
80	GCA_025187415.1	Streptococcus thermophilus	CIRM-BIA 24	SAMN10365638	1959	France	-	554	0	18	31	35.85
81	GCA_039783955.1	Streptococcus thermophilus	4145	SAMN16933254	1996	Ireland	-	561	0	28	29	40.31
82	GCA_000521305.1	Streptococcus thermophilus TH1436	TH1436	SAMN02402367	2011-04-01	Italy: Friuli Venezia Giulia	-	563	0	28	28	39.60
83	GCA_039783405.1	Streptococcus thermophilus	ST19	SAMN16933243	1995	Ireland	-	563	0	19	29	34.67
84	GCA_040098105.1	Streptococcus thermophilus	CLA-JM-H39	SAMN40631525	2020-04-28	Germany:Aachen	Homo sapiens	564	0	29	33	43.93
85	GCA_040822555.1	Streptococcus thermophilus	ATA-LTC-Ld120812	SAMN41784240	2012-08-12	Turkey: Istanbul, Sisli	Homo sapiens	564	0	29	33	43.93
86	GCA_040822615.1	Streptococcus thermophilus	ATA-LTC St140700	SAMN41784236	2000-07-14	Turkey: Izmir, Kemalpasa	-	564	0	29	33	43.93
87	GCA_017366965.1	Streptococcus thermophilus	S72	SAMN15923554	2019	Switzerland	-	566	0	25	33	41.40
88	GCA_017367225.1	Streptococcus thermophilus	13494	SAMN15923537	1984	Switzerland	-	566	0	25	29	38.29
89	GCA_017366985.1	Streptococcus thermophilus	24855	SAMN15923552	2019	Switzerland	-	567	0	25	29	38.29
90	GCA_025187485.1	Streptococcus thermophilus	CIRM-BIA 2104	SAMN10365635	1993	France	-	573	0	18	33	37.59
91	GCA_020076005.1	Streptococcus thermophilus	DS03_14	SAMN15078662	2018-03-12	USA:MD	Homo sapiens	576	0	25	33	41.40
92	GCA_020076175.1	Streptococcus thermophilus	CF12_14	SAMN15078601	2018-03-12	USA:MD	Homo sapiens	578	0	25	32	40.61
93	GCA_034044695.1	Streptococcus thermophilus	KF8	SAMN38411847	2022-09-10	Russia: Moscow	-	578	0	27	33	42.64
94	GCA_009856565.1	Streptococcus thermophilus	EU01	SAMN13618337	2018-04-18	China: tianjin	Homo sapiens	579	0	25	28	37.54
95	GCA_039784885.1	Streptococcus thermophilus	ST128	SAMN16933244	1996	Ireland	-	579	0	26	29	38.95
96	GCA_004114735.1	Streptococcus thermophilus	IDCC2201	SAMN10782595	2018-11	South Korea: Hwaseong	-	580	0	27	29	39.62
97	GCA_019449675.1	Streptococcus thermophilus	Vach57	SAMN19116181	2020-11-09	Ireland	-	580	0	23	33	40.22
98	GCA_019449815.1	Streptococcus thermophilus	Brie16	SAMN19116371	2020-11-09	Ireland	-	580	0	27	33	42.64
99	GCA_019449855.1	Streptococcus thermophilus	Moz83	SAMN19116395	2020-11-09	Ireland	-	580	0	27	33	42.64
100	GCA_041511495.1	Streptococcus thermophilus	S24746	SAMN18478715	2019	Switzerland	-	580	0	25	28	37.54