GCA_042055315.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKGGNJBNG_1 (original name was: gnl|Prokka|KGGNJBNG_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	281,802	322,968

gnlProkkaKGGNJBNG_12 (original name was: gnl|Prokka|KGGNJBNG_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	33,826	44,026
Region 12.2	RiPP-like	109,996	132,784

gnlProkkaKGGNJBNG_29 (original name was: gnl|Prokka|KGGNJBNG_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	23,124	35,220	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	281,802	322,968
Region 12.1	RiPP-like	33,826	44,026
Region 12.2	RiPP-like	109,996	132,784
Region 20.1	RiPP-like	23,124	35,220	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaKGGNJBNG_2 (original name was: gnl|Prokka|KGGNJBNG_2); gnlProkkaKGGNJBNG_3 (original name was: gnl|Prokka|KGGNJBNG_3); gnlProkkaKGGNJBNG_4 (original name was: gnl|Prokka|KGGNJBNG_4); gnlProkkaKGGNJBNG_5 (original name was: gnl|Prokka|KGGNJBNG_5); gnlProkkaKGGNJBNG_6 (original name was: gnl|Prokka|KGGNJBNG_6); gnlProkkaKGGNJBNG_7 (original name was: gnl|Prokka|KGGNJBNG_7); gnlProkkaKGGNJBNG_8 (original name was: gnl|Prokka|KGGNJBNG_8); gnlProkkaKGGNJBNG_9 (original name was: gnl|Prokka|KGGNJBNG_9); gnlProkkaKGGNJBNG_10 (original name was: gnl|Prokka|KGGNJBNG_10); gnlProkkaKGGNJBNG_11 (original name was: gnl|Prokka|KGGNJBNG_11); gnlProkkaKGGNJBNG_13 (original name was: gnl|Prokka|KGGNJBNG_13); gnlProkkaKGGNJBNG_23 (original name was: gnl|Prokka|KGGNJBNG_23); gnlProkkaKGGNJBNG_24 (original name was: gnl|Prokka|KGGNJBNG_24); gnlProkkaKGGNJBNG_25 (original name was: gnl|Prokka|KGGNJBNG_25); gnlProkkaKGGNJBNG_26 (original name was: gnl|Prokka|KGGNJBNG_26); gnlProkkaKGGNJBNG_27 (original name was: gnl|Prokka|KGGNJBNG_27); gnlProkkaKGGNJBNG_28 (original name was: gnl|Prokka|KGGNJBNG_28)

Compact view

gnlProkkaKGGNJBNG_1 - Region 1 - T3PKS

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Location: 281,802 - 322,968 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKGGNJBNG_12 - Region 1 - RiPP-like

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Location: 33,826 - 44,026 nt. (total: 10,201 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKGGNJBNG_12 - Region 2 - RiPP-like

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Location: 109,996 - 132,784 nt. (total: 22,789 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKGGNJBNG_29 - Region 1 - RiPP-like

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Location: 23,124 - 35,220 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1