GCA_043951925.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPJJHHMPO_8 (original name was: gnl|Prokka|PJJHHMPO_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	88,768	109,649

gnlProkkaPJJHHMPO_9 (original name was: gnl|Prokka|PJJHHMPO_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	1	19,755

gnlProkkaPJJHHMPO_10 (original name was: gnl|Prokka|PJJHHMPO_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	16,279	27,493

gnlProkkaPJJHHMPO_13 (original name was: gnl|Prokka|PJJHHMPO_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	85,239	118,371

Region	Type	From	To	Similarity
Region 1.1	terpene	88,768	109,649
Region 2.1	cyclic-lactone-autoinducer	1	19,755
Region 3.1	RiPP-like	16,279	27,493
Region 6.1	T3PKS	85,239	118,371

No secondary metabolite regions were found in these records:: gnlProkkaPJJHHMPO_11 (original name was: gnl|Prokka|PJJHHMPO_11); gnlProkkaPJJHHMPO_12 (original name was: gnl|Prokka|PJJHHMPO_12); gnlProkkaPJJHHMPO_14 (original name was: gnl|Prokka|PJJHHMPO_14); gnlProkkaPJJHHMPO_15 (original name was: gnl|Prokka|PJJHHMPO_15); gnlProkkaPJJHHMPO_16 (original name was: gnl|Prokka|PJJHHMPO_16); gnlProkkaPJJHHMPO_17 (original name was: gnl|Prokka|PJJHHMPO_17); gnlProkkaPJJHHMPO_18 (original name was: gnl|Prokka|PJJHHMPO_18); gnlProkkaPJJHHMPO_19 (original name was: gnl|Prokka|PJJHHMPO_19); gnlProkkaPJJHHMPO_20 (original name was: gnl|Prokka|PJJHHMPO_20); gnlProkkaPJJHHMPO_21 (original name was: gnl|Prokka|PJJHHMPO_21); gnlProkkaPJJHHMPO_22 (original name was: gnl|Prokka|PJJHHMPO_22); gnlProkkaPJJHHMPO_23 (original name was: gnl|Prokka|PJJHHMPO_23); gnlProkkaPJJHHMPO_24 (original name was: gnl|Prokka|PJJHHMPO_24); gnlProkkaPJJHHMPO_25 (original name was: gnl|Prokka|PJJHHMPO_25); gnlProkkaPJJHHMPO_26 (original name was: gnl|Prokka|PJJHHMPO_26); gnlProkkaPJJHHMPO_27 (original name was: gnl|Prokka|PJJHHMPO_27); gnlProkkaPJJHHMPO_28 (original name was: gnl|Prokka|PJJHHMPO_28); gnlProkkaPJJHHMPO_29 (original name was: gnl|Prokka|PJJHHMPO_29); gnlProkkaPJJHHMPO_30 (original name was: gnl|Prokka|PJJHHMPO_30); gnlProkkaPJJHHMPO_31 (original name was: gnl|Prokka|PJJHHMPO_31); gnlProkkaPJJHHMPO_32 (original name was: gnl|Prokka|PJJHHMPO_32); gnlProkkaPJJHHMPO_33 (original name was: gnl|Prokka|PJJHHMPO_33); gnlProkkaPJJHHMPO_34 (original name was: gnl|Prokka|PJJHHMPO_34); gnlProkkaPJJHHMPO_35 (original name was: gnl|Prokka|PJJHHMPO_35); gnlProkkaPJJHHMPO_36 (original name was: gnl|Prokka|PJJHHMPO_36); gnlProkkaPJJHHMPO_37 (original name was: gnl|Prokka|PJJHHMPO_37); gnlProkkaPJJHHMPO_38 (original name was: gnl|Prokka|PJJHHMPO_38); gnlProkkaPJJHHMPO_39 (original name was: gnl|Prokka|PJJHHMPO_39); gnlProkkaPJJHHMPO_40 (original name was: gnl|Prokka|PJJHHMPO_40); gnlProkkaPJJHHMPO_41 (original name was: gnl|Prokka|PJJHHMPO_41); gnlProkkaPJJHHMPO_42 (original name was: gnl|Prokka|PJJHHMPO_42); gnlProkkaPJJHHMPO_43 (original name was: gnl|Prokka|PJJHHMPO_43); gnlProkkaPJJHHMPO_44 (original name was: gnl|Prokka|PJJHHMPO_44); gnlProkkaPJJHHMPO_45 (original name was: gnl|Prokka|PJJHHMPO_45); gnlProkkaPJJHHMPO_46 (original name was: gnl|Prokka|PJJHHMPO_46); gnlProkkaPJJHHMPO_47 (original name was: gnl|Prokka|PJJHHMPO_47); gnlProkkaPJJHHMPO_48 (original name was: gnl|Prokka|PJJHHMPO_48); gnlProkkaPJJHHMPO_49 (original name was: gnl|Prokka|PJJHHMPO_49); gnlProkkaPJJHHMPO_50 (original name was: gnl|Prokka|PJJHHMPO_50); gnlProkkaPJJHHMPO_51 (original name was: gnl|Prokka|PJJHHMPO_51); gnlProkkaPJJHHMPO_52 (original name was: gnl|Prokka|PJJHHMPO_52); gnlProkkaPJJHHMPO_53 (original name was: gnl|Prokka|PJJHHMPO_53); gnlProkkaPJJHHMPO_54 (original name was: gnl|Prokka|PJJHHMPO_54); gnlProkkaPJJHHMPO_55 (original name was: gnl|Prokka|PJJHHMPO_55); gnlProkkaPJJHHMPO_56 (original name was: gnl|Prokka|PJJHHMPO_56); gnlProkkaPJJHHMPO_57 (original name was: gnl|Prokka|PJJHHMPO_57); gnlProkkaPJJHHMPO_58 (original name was: gnl|Prokka|PJJHHMPO_58); gnlProkkaPJJHHMPO_59 (original name was: gnl|Prokka|PJJHHMPO_59); gnlProkkaPJJHHMPO_60 (original name was: gnl|Prokka|PJJHHMPO_60); gnlProkkaPJJHHMPO_61 (original name was: gnl|Prokka|PJJHHMPO_61); gnlProkkaPJJHHMPO_62 (original name was: gnl|Prokka|PJJHHMPO_62); gnlProkkaPJJHHMPO_63 (original name was: gnl|Prokka|PJJHHMPO_63); gnlProkkaPJJHHMPO_64 (original name was: gnl|Prokka|PJJHHMPO_64); gnlProkkaPJJHHMPO_65 (original name was: gnl|Prokka|PJJHHMPO_65); gnlProkkaPJJHHMPO_73 (original name was: gnl|Prokka|PJJHHMPO_73); gnlProkkaPJJHHMPO_84 (original name was: gnl|Prokka|PJJHHMPO_84); gnlProkkaPJJHHMPO_95 (original name was: gnl|Prokka|PJJHHMPO_95); gnlProkkaPJJHHMPO_106 (original name was: gnl|Prokka|PJJHHMPO_106)

Compact view

gnlProkkaPJJHHMPO_8 - Region 1 - terpene

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Location: 88,768 - 109,649 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPJJHHMPO_9 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 19,755 nt. (total: 19,755 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPJJHHMPO_10 - Region 1 - RiPP-like

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Location: 16,279 - 27,493 nt. (total: 11,215 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPJJHHMPO_13 - Region 1 - T3PKS

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Location: 85,239 - 118,371 nt. (total: 33,133 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.