GCA_043951965.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNAFHDOBH_11 (original name was: gnl|Prokka|NAFHDOBH_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	18,362	39,243

gnlProkkaNAFHDOBH_19 (original name was: gnl|Prokka|NAFHDOBH_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	61,064	81,660

gnlProkkaNAFHDOBH_28 (original name was: gnl|Prokka|NAFHDOBH_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	390,290	414,171

gnlProkkaNAFHDOBH_116 (original name was: gnl|Prokka|NAFHDOBH_116)

Region	Type	From	To	Most similar known cluster		Similarity
Region 64.1	RiPP-like	1	7,491

Region	Type	From	To	Similarity
Region 1.1	terpene	18,362	39,243
Region 2.1	cyclic-lactone-autoinducer	61,064	81,660
Region 11.1	T3PKS	390,290	414,171
Region 64.1	RiPP-like	1	7,491

No secondary metabolite regions were found in these records:: gnlProkkaNAFHDOBH_20 (original name was: gnl|Prokka|NAFHDOBH_20); gnlProkkaNAFHDOBH_21 (original name was: gnl|Prokka|NAFHDOBH_21); gnlProkkaNAFHDOBH_22 (original name was: gnl|Prokka|NAFHDOBH_22); gnlProkkaNAFHDOBH_23 (original name was: gnl|Prokka|NAFHDOBH_23); gnlProkkaNAFHDOBH_24 (original name was: gnl|Prokka|NAFHDOBH_24); gnlProkkaNAFHDOBH_25 (original name was: gnl|Prokka|NAFHDOBH_25); gnlProkkaNAFHDOBH_26 (original name was: gnl|Prokka|NAFHDOBH_26); gnlProkkaNAFHDOBH_27 (original name was: gnl|Prokka|NAFHDOBH_27); gnlProkkaNAFHDOBH_29 (original name was: gnl|Prokka|NAFHDOBH_29); gnlProkkaNAFHDOBH_30 (original name was: gnl|Prokka|NAFHDOBH_30); gnlProkkaNAFHDOBH_31 (original name was: gnl|Prokka|NAFHDOBH_31); gnlProkkaNAFHDOBH_32 (original name was: gnl|Prokka|NAFHDOBH_32); gnlProkkaNAFHDOBH_33 (original name was: gnl|Prokka|NAFHDOBH_33); gnlProkkaNAFHDOBH_34 (original name was: gnl|Prokka|NAFHDOBH_34); gnlProkkaNAFHDOBH_35 (original name was: gnl|Prokka|NAFHDOBH_35); gnlProkkaNAFHDOBH_36 (original name was: gnl|Prokka|NAFHDOBH_36); gnlProkkaNAFHDOBH_37 (original name was: gnl|Prokka|NAFHDOBH_37); gnlProkkaNAFHDOBH_38 (original name was: gnl|Prokka|NAFHDOBH_38); gnlProkkaNAFHDOBH_39 (original name was: gnl|Prokka|NAFHDOBH_39); gnlProkkaNAFHDOBH_40 (original name was: gnl|Prokka|NAFHDOBH_40); gnlProkkaNAFHDOBH_41 (original name was: gnl|Prokka|NAFHDOBH_41); gnlProkkaNAFHDOBH_42 (original name was: gnl|Prokka|NAFHDOBH_42); gnlProkkaNAFHDOBH_43 (original name was: gnl|Prokka|NAFHDOBH_43); gnlProkkaNAFHDOBH_44 (original name was: gnl|Prokka|NAFHDOBH_44); gnlProkkaNAFHDOBH_45 (original name was: gnl|Prokka|NAFHDOBH_45); gnlProkkaNAFHDOBH_46 (original name was: gnl|Prokka|NAFHDOBH_46); gnlProkkaNAFHDOBH_47 (original name was: gnl|Prokka|NAFHDOBH_47); gnlProkkaNAFHDOBH_48 (original name was: gnl|Prokka|NAFHDOBH_48); gnlProkkaNAFHDOBH_49 (original name was: gnl|Prokka|NAFHDOBH_49); gnlProkkaNAFHDOBH_50 (original name was: gnl|Prokka|NAFHDOBH_50); gnlProkkaNAFHDOBH_51 (original name was: gnl|Prokka|NAFHDOBH_51); gnlProkkaNAFHDOBH_52 (original name was: gnl|Prokka|NAFHDOBH_52); gnlProkkaNAFHDOBH_53 (original name was: gnl|Prokka|NAFHDOBH_53); gnlProkkaNAFHDOBH_54 (original name was: gnl|Prokka|NAFHDOBH_54); gnlProkkaNAFHDOBH_55 (original name was: gnl|Prokka|NAFHDOBH_55); gnlProkkaNAFHDOBH_56 (original name was: gnl|Prokka|NAFHDOBH_56); gnlProkkaNAFHDOBH_57 (original name was: gnl|Prokka|NAFHDOBH_57); gnlProkkaNAFHDOBH_58 (original name was: gnl|Prokka|NAFHDOBH_58); gnlProkkaNAFHDOBH_59 (original name was: gnl|Prokka|NAFHDOBH_59); gnlProkkaNAFHDOBH_60 (original name was: gnl|Prokka|NAFHDOBH_60); gnlProkkaNAFHDOBH_61 (original name was: gnl|Prokka|NAFHDOBH_61); gnlProkkaNAFHDOBH_62 (original name was: gnl|Prokka|NAFHDOBH_62); gnlProkkaNAFHDOBH_63 (original name was: gnl|Prokka|NAFHDOBH_63); gnlProkkaNAFHDOBH_64 (original name was: gnl|Prokka|NAFHDOBH_64); gnlProkkaNAFHDOBH_65 (original name was: gnl|Prokka|NAFHDOBH_65); gnlProkkaNAFHDOBH_66 (original name was: gnl|Prokka|NAFHDOBH_66); gnlProkkaNAFHDOBH_67 (original name was: gnl|Prokka|NAFHDOBH_67); gnlProkkaNAFHDOBH_68 (original name was: gnl|Prokka|NAFHDOBH_68); gnlProkkaNAFHDOBH_69 (original name was: gnl|Prokka|NAFHDOBH_69); gnlProkkaNAFHDOBH_70 (original name was: gnl|Prokka|NAFHDOBH_70); gnlProkkaNAFHDOBH_71 (original name was: gnl|Prokka|NAFHDOBH_71); gnlProkkaNAFHDOBH_72 (original name was: gnl|Prokka|NAFHDOBH_72); gnlProkkaNAFHDOBH_73 (original name was: gnl|Prokka|NAFHDOBH_73); gnlProkkaNAFHDOBH_74 (original name was: gnl|Prokka|NAFHDOBH_74); gnlProkkaNAFHDOBH_75 (original name was: gnl|Prokka|NAFHDOBH_75); gnlProkkaNAFHDOBH_76 (original name was: gnl|Prokka|NAFHDOBH_76); gnlProkkaNAFHDOBH_77 (original name was: gnl|Prokka|NAFHDOBH_77); gnlProkkaNAFHDOBH_83 (original name was: gnl|Prokka|NAFHDOBH_83); gnlProkkaNAFHDOBH_94 (original name was: gnl|Prokka|NAFHDOBH_94); gnlProkkaNAFHDOBH_105 (original name was: gnl|Prokka|NAFHDOBH_105)

Compact view

gnlProkkaNAFHDOBH_11 - Region 1 - terpene

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Location: 18,362 - 39,243 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNAFHDOBH_19 - Region 1 - cyclic-lactone-autoinducer

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Location: 61,064 - 81,660 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNAFHDOBH_28 - Region 1 - T3PKS

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Location: 390,290 - 414,171 nt. (total: 23,882 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNAFHDOBH_116 - Region 1 - RiPP-like

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Location: 1 - 7,491 nt. (total: 7,491 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.