GCA_044129425.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOJCLBHNN_11 (original name was: gnl|Prokka|OJCLBHNN_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	28,018	48,899

gnlProkkaOJCLBHNN_22 (original name was: gnl|Prokka|OJCLBHNN_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	cyclic-lactone-autoinducer	211,596	232,301

gnlProkkaOJCLBHNN_30 (original name was: gnl|Prokka|OJCLBHNN_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	316,219	328,369

gnlProkkaOJCLBHNN_41 (original name was: gnl|Prokka|OJCLBHNN_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	T3PKS	1	25,758

Region	Type	From	To	Similarity
Region 11.1	terpene	28,018	48,899
Region 19.1	cyclic-lactone-autoinducer	211,596	232,301
Region 20.1	RiPP-like	316,219	328,369
Region 21.1	T3PKS	1	25,758

No secondary metabolite regions were found in these records:: gnlProkkaOJCLBHNN_1 (original name was: gnl|Prokka|OJCLBHNN_1); gnlProkkaOJCLBHNN_2 (original name was: gnl|Prokka|OJCLBHNN_2); gnlProkkaOJCLBHNN_3 (original name was: gnl|Prokka|OJCLBHNN_3); gnlProkkaOJCLBHNN_4 (original name was: gnl|Prokka|OJCLBHNN_4); gnlProkkaOJCLBHNN_5 (original name was: gnl|Prokka|OJCLBHNN_5); gnlProkkaOJCLBHNN_6 (original name was: gnl|Prokka|OJCLBHNN_6); gnlProkkaOJCLBHNN_7 (original name was: gnl|Prokka|OJCLBHNN_7); gnlProkkaOJCLBHNN_8 (original name was: gnl|Prokka|OJCLBHNN_8); gnlProkkaOJCLBHNN_9 (original name was: gnl|Prokka|OJCLBHNN_9); gnlProkkaOJCLBHNN_10 (original name was: gnl|Prokka|OJCLBHNN_10); gnlProkkaOJCLBHNN_12 (original name was: gnl|Prokka|OJCLBHNN_12); gnlProkkaOJCLBHNN_13 (original name was: gnl|Prokka|OJCLBHNN_13); gnlProkkaOJCLBHNN_14 (original name was: gnl|Prokka|OJCLBHNN_14); gnlProkkaOJCLBHNN_15 (original name was: gnl|Prokka|OJCLBHNN_15); gnlProkkaOJCLBHNN_16 (original name was: gnl|Prokka|OJCLBHNN_16); gnlProkkaOJCLBHNN_17 (original name was: gnl|Prokka|OJCLBHNN_17); gnlProkkaOJCLBHNN_18 (original name was: gnl|Prokka|OJCLBHNN_18); gnlProkkaOJCLBHNN_44 (original name was: gnl|Prokka|OJCLBHNN_44); gnlProkkaOJCLBHNN_45 (original name was: gnl|Prokka|OJCLBHNN_45); gnlProkkaOJCLBHNN_46 (original name was: gnl|Prokka|OJCLBHNN_46); gnlProkkaOJCLBHNN_47 (original name was: gnl|Prokka|OJCLBHNN_47); gnlProkkaOJCLBHNN_48 (original name was: gnl|Prokka|OJCLBHNN_48)

Compact view

gnlProkkaOJCLBHNN_11 - Region 1 - terpene

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Location: 28,018 - 48,899 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOJCLBHNN_22 - Region 1 - cyclic-lactone-autoinducer

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Location: 211,596 - 232,301 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOJCLBHNN_30 - Region 1 - RiPP-like

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Location: 316,219 - 328,369 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOJCLBHNN_41 - Region 1 - T3PKS

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Location: 1 - 25,758 nt. (total: 25,758 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.