Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_044731905.1	Lactiplantibacillus plantarum	DSM 12028	SAMN41278858	-	Portugal: Beira Baixa	-	0	0	0	2	2.00
2	GCA_022558425.1	Lactiplantibacillus plantarum	ST	SAMN24424940	2016-07	China: Yunnan Province	-	96	1	0	1	1.41
3	GCA_023108905.1	Lactiplantibacillus plantarum	M4L1	SAMN26138624	2021-06-01	China:Qingdao	-	436	0	0	2	2.00
4	GCA_034422915.1	Lactiplantibacillus plantarum	YW2189	SAMN38636266	2022	Taiwan	Homo sapiens	462	0	0	1	1.00
5	GCA_034478365.1	Lactiplantibacillus plantarum	S034-52w-2	SAMN38650131	2022	Taiwan	Homo sapiens	462	0	0	1	1.00
6	GCA_017580935.1	Lactiplantibacillus plantarum	EL11	SAMN13735608	2009-12	USA: California	-	569	0	0	2	2.00
7	GCA_036321505.1	Lactiplantibacillus plantarum	CGMCC 14177	SAMN39555870	2017-03	China:Shanghai	-	571	0	0	1	1.00
8	GCA_001540965.1	Lactiplantibacillus plantarum	Lp1612	SAMN03702585	2012	France	bovine	573	0	0	2	2.00
9	GCA_030464485.1	Lactiplantibacillus plantarum	FCQNA32M4	SAMN12027236	-	China	Homo sapiens	577	0	0	2	2.00
10	GCA_025189965.1	Lactiplantibacillus plantarum	CIRM-BIA 653	SAMN10365483	1972	France	-	582	0	0	2	2.00
11	GCA_020844665.1	Lactiplantibacillus plantarum	FUA3428	SAMN21235229	2013	Italy	-	584	0	0	2	2.00
12	GCA_026127775.1	Lactiplantibacillus plantarum	FUA3428	SAMN21845660	2013	-	-	584	0	0	2	2.00
13	GCA_034333585.1	Lactiplantibacillus plantarum	cqf-43	SAMN37720970	2021-12-01	China:Chongqing	sow feces	584	0	0	1	1.00
14	GCA_022810685.1	Lactiplantibacillus plantarum	SCB0151	SAMN22106488	2017-08-01	China: Guangzhou	Kefir grain	585	0	0	1	1.00
15	GCA_008868495.1	Lactiplantibacillus plantarum	BIO1096	SAMN12856541	-	-	-	586	0	0	2	2.00
16	GCA_020844685.1	Lactiplantibacillus plantarum	FUA3302	SAMN21227964	2009	Germany	-	586	0	0	2	2.00
17	GCA_026127685.1	Lactiplantibacillus plantarum	FUA3302	SAMN21845655	2009	-	-	586	0	0	2	2.00
18	GCA_002024845.1	Lactiplantibacillus plantarum	CLP0611	SAMN06240352	1900-01-01	-	-	587	0	0	1	1.00
19	GCA_002914965.1	Lactiplantibacillus plantarum	BP06	SAMN07187784	2017	Italy	-	587	0	0	2	2.00
20	GCA_003023825.1	Lactiplantibacillus plantarum	JDARSH	SAMN08741665	2016	India: Kolhapur	-	587	0	0	2	2.00
21	GCA_003053035.1	Lactiplantibacillus plantarum	DS18_9	SAMN06464105	2016-10-14	USA:MD	Homo sapiens	587	0	0	2	2.00
22	GCA_003061725.1	Lactiplantibacillus plantarum	DS6_9	SAMN05726897	2016-02-05	USA:MD	Homo sapiens	587	0	0	2	2.00
23	GCA_003061765.1	Lactiplantibacillus plantarum	DS14_9	SAMN05726895	2016-03-06	USA:MD	Homo sapiens	587	0	0	2	2.00
24	GCA_003061785.1	Lactiplantibacillus plantarum	DS9_9	SAMN05726899	2016-02-05	USA:MD	Homo sapiens	587	0	0	2	2.00
25	GCA_003061805.1	Lactiplantibacillus plantarum	DS11_9	SAMN05726893	2015-12-12	USA:MD	Homo sapiens	587	0	0	2	2.00
26	GCA_003143915.1	Lactiplantibacillus plantarum	HAC01	SAMN09087848	2012	South Korea	-	587	0	0	1	1.00
27	GCA_003586485.1	Lactiplantibacillus plantarum	DR7	SAMN09721150	2016-09-01	Malaysia	Bos taurus	587	0	0	1	1.00
28	GCA_003597595.1	Lactiplantibacillus plantarum	ATG-K6	SAMN10094369	2016-01-12	South Korea	-	587	0	0	1	1.00
29	GCA_003597615.1	Lactiplantibacillus plantarum	ATG-K8	SAMN10094466	2016-01-14	South Korea	-	587	0	0	1	1.00
30	GCA_006364975.1	Lactiplantibacillus plantarum	NTTN08	SAMN11952115	2016-08-08	Viet Nam	Homo sapiens	587	0	0	2	2.00
31	GCA_013256965.1	Lactiplantibacillus plantarum subsp. plantarum	G1	SAMN14979736	2019-05-01	Brazil	-	587	0	0	1	1.00
32	GCA_021279005.2	Lactiplantibacillus plantarum	022AE	SAMN09662691	2017-01-02	India: Maharashtra	-	587	0	0	1	1.00
33	GCA_026183415.1	Lactiplantibacillus plantarum	BRD_L15	SAMN31580342	2022-08-12	South Korea:Kyungki	Canis lupus familiaris dachshund	587	0	0	1	1.00
34	GCA_026275505.1	Lactiplantibacillus plantarum	V1	SAMN31726903	2021	Israel	cow	587	0	0	1	1.00
35	GCA_028323145.1	Lactiplantibacillus plantarum	1001274st1_G7_1001274B_151102	SAMN31322645	2015-11-02	USA	Homo sapiens	587	0	0	2	2.00
36	GCA_028323205.1	Lactiplantibacillus plantarum	1001274st1_B5_1001274B_151102	SAMN31322644	2015-11-02	USA	Homo sapiens	587	0	0	2	2.00
37	GCA_040785175.1	Lactiplantibacillus plantarum	gbc_d	SAMN41082099	2021	USA: Glendale, Arizona	-	587	0	0	2	2.00
38	GCA_040822595.1	Lactiplantibacillus plantarum	ATA-LPC98052	SAMN41784237	1997-01-12	Turkey: Usak, Evrendede, Cokragan	-	587	0	0	2	2.00
39	GCA_040883545.1	Lactiplantibacillus plantarum	AM-LP-81	SAMN42007028	-	-	-	587	0	0	2	2.00
40	GCA_041344945.1	Lactiplantibacillus plantarum	MD159	SAMN43087929	2021-04-16	South Korea: Pyeongtaek	-	587	0	0	1	1.00
41	GCA_042691645.1	Lactiplantibacillus plantarum	LP01	SAMN43919990	2022	Malta	-	587	0	0	1	1.00
42	GCA_045348195.1	Lactiplantibacillus plantarum	TCI999	SAMN40716503	2018-07-10	Taiwan: Taipei	-	587	0	0	1	1.00
43	GCA_045528025.1	Lactiplantibacillus plantarum	FAM 25263	SAMN43257761	2019-11	Switzerland	-	587	0	0	2	2.00
44	GCA_046109905.1	Lactiplantibacillus plantarum	TCI227	SAMN40890045	2018-08-16	Taiwan: Taipei	-	587	0	0	1	1.00
45	GCA_047495545.1	Lactiplantibacillus plantarum	OBM7	SAMN46400537	2024-09	China:Qinghai	-	587	0	0	1	1.00
46	GCA_047649195.1	Lactiplantibacillus plantarum	V2	SAMN46400503	2024-09	China:Qinghai	-	587	0	0	1	1.00
47	GCA_048657025.1	Lactiplantibacillus plantarum	RAL-4	SAMN46169820	2024-04-15	China: Zhenjiang	-	587	0	0	2	2.00
48	GCA_003053045.1	Lactiplantibacillus plantarum	DS23_9	SAMN06464107	2016-12-16	USA:MD	Homo sapiens	588	0	0	2	2.00
49	GCA_025212155.1	Lactiplantibacillus plantarum	CIRM-BIA 2224	SAMN10365325	1978	France	-	588	0	0	2	2.00
50	GCA_040785225.1	Lactiplantibacillus plantarum	gbc_C	SAMN41082098	2021	USA: Glendale, Arizona	-	588	0	0	2	2.00
51	GCA_040790905.1	Lactiplantibacillus plantarum	AUSA004	SAMN41916868	2023-11-20	China:Longgang District, Shenzhen City, Guangdong Province	-	588	0	0	1	1.00
52	GCA_001272315.2	Lactiplantibacillus plantarum subsp. plantarum	CGMCC 1.557	SAMN03976562	2014-12	China	-	589	0	0	1	1.00
53	GCA_004101605.1	Lactiplantibacillus plantarum	SRCM103362	SAMN10743347	2018	South Korea	-	590	0	0	1	1.00
54	GCA_009756965.1	Lactiplantibacillus plantarum	BK-022	SAMN11655668	2016-06-30	South Korea: Pohang City	-	590	0	0	1	1.00
55	GCA_017576965.1	Lactiplantibacillus plantarum	KLDS1.0386	SAMN18323758	2012-10	China:Inner Mongolia	-	591	0	0	1	1.00
56	GCA_003966855.1	Lactiplantibacillus plantarum	-	SAMD00097254	-	-	-	593	0	0	1	1.00
57	GCA_001633565.1	Lactiplantibacillus plantarum	Nizo2801	SAMN04528826	2013-01-01	Japan	-	595	0	0	2	2.00
58	GCA_019599425.1	Lactiplantibacillus plantarum	JZ6	SAMN20526383	2021-02-23	China:Henan	-	596	0	0	2	2.00
59	GCA_024181685.1	Lactiplantibacillus plantarum	P9	SAMN15795378	2008	China:Inner Mongolia	-	596	0	0	1	1.00
60	GCA_031085385.1	Lactiplantibacillus plantarum	BRD3A	SAMN33981270	2019-03-12	India: Manipur	-	596	0	0	2	2.00
61	GCA_043951895.1	Lactiplantibacillus plantarum	LP3-9	SAMN44321994	2022-10	China:Hubei	-	596	0	0	2	2.00
62	GCA_043951965.1	Lactiplantibacillus plantarum	LP3-5	SAMN44321959	2022-10	China:Hubei	-	596	0	0	2	2.00
63	GCA_030464565.1	Lactiplantibacillus plantarum	VJLHD12L4	SAMN12027231	-	China	-	604	0	0	2	2.00
64	GCA_044129425.1	Lactiplantibacillus plantarum	LVS14	SAMN37186726	2022	Egypt: Alexandria	-	604	0	0	2	2.00
65	GCA_023195585.1	Lactiplantibacillus plantarum	LM14-2	SAMN27734819	2020-05-28	Thailand: Chonburi province	-	610	0	0	2	2.00
66	GCA_001715615.1	Lactiplantibacillus plantarum	LY-78	SAMN04437173	2009-11-20	China:heilongjiang	-	614	0	0	1	1.00
67	GCA_030061985.1	Lactiplantibacillus plantarum	SS6	SAMN25008671	2017-09-12	China:Beijing	-	614	0	0	1	1.00
68	GCA_031461055.1	Lactiplantibacillus plantarum	KCKM 0106	SAMN37221010	2016-03-18	South Korea	-	615	0	0	1	1.00
69	GCA_001651845.1	Lactiplantibacillus plantarum	Nizo1837	SAMN04510483	2013-01-01	United Kingdom	Homo sapiens	616	0	0	2	2.00
70	GCA_004102885.1	Lactiplantibacillus plantarum	D31	SAMN10145049	2014	China: Shanghai	-	616	2	1	4	4.58
71	GCA_009889775.1	Lactiplantibacillus plantarum	LpRas	SAMN05645852	2015	Sweden:Stockholm	-	616	0	0	2	2.00
72	GCA_020881935.1	Lactiplantibacillus plantarum	ZW5	SAMN22871635	2020-08	China:Jinan	-	616	0	0	1	1.00
73	GCA_027854125.1	Lactiplantibacillus plantarum	HH-LP56	SAMN32599285	2022-12-31	China:Jiangsu	-	616	0	0	2	2.00
74	GCA_029854235.1	Lactiplantibacillus plantarum	MA2	SAMN34153834	2010	China: Tibet	-	616	0	0	1	1.00
75	GCA_031461015.1	Lactiplantibacillus plantarum	KCKM 0594	SAMN37256206	2016	South Korea	-	616	0	0	1	1.00
76	GCA_036330065.1	Lactiplantibacillus plantarum subsp. plantarum	GBCC-GR003	SAMN39614441	2022-12-27	South Korea:Seoul	Homo sapiens	616	0	0	1	1.00
77	GCA_039838505.1	Lactiplantibacillus plantarum	1001287st2_C3_1001287B_170213	SAMN31322647	2017-02-13	USA	Homo sapiens	616	0	0	2	2.00
78	GCA_039938975.1	Lactiplantibacillus plantarum	LS 4-4	SAMN41451970	2016	Russia	Homo sapiens	616	0	0	2	2.00
79	GCA_041679785.1	Lactiplantibacillus plantarum	Do4_IM	SAMN41163062	2021	Germany	Homo sapiens	616	0	0	2	2.00
80	GCA_001633725.1	Lactiplantibacillus plantarum	Nizo3894	SAMN04528934	2013-01-01	-	-	617	0	0	2	2.00
81	GCA_001639545.1	Lactiplantibacillus plantarum	Nizo2259	SAMN04525553	2013-01-01	France	Homo sapiens	617	0	0	2	2.00
82	GCA_001639565.1	Lactiplantibacillus plantarum	Nizo2260	SAMN04525974	2013-01-01	United Kingdom	Homo sapiens	617	0	0	2	2.00
83	GCA_026127845.1	Lactiplantibacillus plantarum	FUA3183	SAMN21845662	2010	-	-	617	0	0	2	2.00
84	GCA_037966755.1	Lactiplantibacillus plantarum	ATA-LTC-Lp230198	SAMN40643420	1998-01-23	Turkey:Manisa	-	617	0	0	2	2.00
85	GCA_040705195.1	Lactiplantibacillus plantarum	LMG 13556	SAMN42370085	1952	United Kingdom: Scotland	-	617	0	0	2	2.00
86	GCA_040745055.1	Lactiplantibacillus plantarum	CMTB-TF1	SAMN42358598	2018-11-12	South Korea: Pohang	Tremella fuciformis	617	0	0	1	1.00
87	GCA_001639585.1	Lactiplantibacillus plantarum	Nizo2262	SAMN04525975	2013-01-01	-	-	618	0	0	2	2.00
88	GCA_003345375.1	Lactiplantibacillus plantarum	TMW 1.1478	SAMN07236647	-	Germany	-	618	0	0	1	1.00
89	GCA_004025165.1	Lactiplantibacillus plantarum	SKT109	SAMN10721184	2012-08-15	China: Tibet	-	618	0	0	2	2.00
90	GCA_004123095.1	Lactiplantibacillus plantarum	XZ3303	SAMN10782618	2012-08-15	China: Tibet	-	618	0	0	2	2.00
91	GCA_017351995.1	Lactiplantibacillus plantarum	AR195	SAMN18137751	2014-04-27	China:shanghai	-	618	0	0	1	1.00
92	GCA_044590115.1	Lactiplantibacillus plantarum	NMGL2	SAMN44480978	2020-10-01	China: Beijing	Food sample	618	0	0	1	1.00
93	GCA_003344845.1	Lactiplantibacillus plantarum	CGMCC12436	SAMN09699166	2014-07	China	-	619	0	0	2	2.00
94	GCA_007833595.1	Lactiplantibacillus plantarum	Y44	SAMN09487401	2015-06-30	China: Dalian	-	619	0	0	1	1.00
95	GCA_017301935.1	Lactiplantibacillus plantarum	12	SAMN13495976	2015-03	China:Dalian	Scophthalmus maximus	619	0	0	1	1.00
96	GCA_019076805.1	Lactiplantibacillus plantarum	XJ25	SAMN17313385	2016-06	China:Xinjiang	-	619	0	0	1	1.00
97	GCA_023207995.1	Lactiplantibacillus plantarum	LP-F1	SAMN14572866	2019-09	China: Heilongjiang	-	619	0	0	1	1.00
98	GCA_030061935.1	Lactiplantibacillus plantarum	B3	SAMN25008669	2017-09-10	China:Beijing	-	619	0	0	1	1.00
99	GCA_038039495.1	Lactiplantibacillus plantarum	plantII	SAMN40560998	2022-10	China:Hubei	activated sludge	619	1	1	2	2.45
100	GCA_038743365.1	Lactiplantibacillus plantarum	HOM2217	SAMN41038019	2020-03-04	China: Beijing	-	619	0	0	1	1.00