Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_044905105.1	Lacticaseibacillus paracasei	E	SAMN44286705	-	-	-	0	0	0	1	1.00
2	GCA_002148875.1	Lacticaseibacillus paracasei	DPC2071	SAMN05949321	1988-11-08	Ireland	-	281	0	0	2	2.00
3	GCA_000410275.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270	CNCM I-4270	SAMN02469729	2000	-	-	286	0	0	2	2.00
4	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	304	0	0	2	2.00
5	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	323	0	0	2	2.00
6	GCA_041734185.1	Lacticaseibacillus paracasei	MGL98	SAMN43028860	2024-07-12	South Korea	-	325	0	0	1	1.00
7	GCA_041893825.1	Lacticaseibacillus paracasei	FMT2	SAMN43472422	2024	South Korea: Daegu	-	325	0	0	1	1.00
8	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	326	0	0	1	1.00
9	GCA_003367655.1	Lacticaseibacillus paracasei subsp. paracasei	KMB_598	SAMN09398938	2013	Slovakia	-	374	0	0	2	2.00
10	GCA_018917305.1	Lacticaseibacillus paracasei	N53	SAMN19374054	2019-08	China: Suzhou	Macaca fascicularis	378	0	0	2	2.00
11	GCA_039615415.1	Lacticaseibacillus paracasei	TBM 27	SAMN41068605	2015-10	Viet Nam: Bac Giang	-	386	0	0	2	2.00
12	GCA_000409835.1	Lacticaseibacillus paracasei subsp. tolerans Lpl7	Lpl7	SAMN02469714	-	-	-	471	0	0	2	2.00
13	GCA_000410335.1	Lacticaseibacillus paracasei subsp. tolerans Lpl14	Lpl14	SAMN02469703	1996	-	-	475	0	0	2	2.00
14	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	519	0	0	2	2.00
15	GCA_030360845.1	Lacticaseibacillus paracasei	TOM.1339	SAMN35776905	2022-11	Russia: Altai	-	562	0	0	2	2.00
16	GCA_036762895.1	Lacticaseibacillus paracasei	1311_IL3157	SAMN37904766	-	-	animal	562	0	0	2	2.00
17	GCA_000309685.1	Lacticaseibacillus paracasei	T71499	SAMN02472001	-	Finland	Homo sapiens	564	0	0	2	2.00
18	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	565	0	0	2	2.00
19	GCA_025190565.1	Lacticaseibacillus paracasei	CIRM-BIA 2128	SAMN10365446	1993	-	-	575	0	0	2	2.00
20	GCA_037414215.1	Lacticaseibacillus paracasei	LPC100	SAMN39212581	1998	Italy: Universit Cattolica di Piacenza	Homo sapiens	575	0	0	1	1.00
21	GCA_003712965.1	Lacticaseibacillus paracasei	FAM6410	SAMN04088893	-	Switzerland	-	583	0	0	2	2.00
22	GCA_009996805.1	Lacticaseibacillus paracasei	D3-5	SAMN13905290	2018-01-10	USA	Homo sapiens	590	0	0	2	2.00
23	GCA_026967245.1	Lacticaseibacillus paracasei	Lpc_yogurt_B6	SAMN32062179	2021-07-27	USA:Chicago	-	590	0	0	2	2.00
24	GCA_041679805.1	Lacticaseibacillus paracasei	APY	SAMN41163063	2021	Germany	Homo sapiens	590	0	0	2	2.00
25	GCA_026967195.1	Lacticaseibacillus paracasei	Lpc_yogurt_B5	SAMN32062178	2021-07-27	USA:Chicago	-	591	0	0	2	2.00
26	GCA_026967205.1	Lacticaseibacillus paracasei	Lpc_yogurt_B4	SAMN32062177	2021-07-27	USA:Chicago	-	591	0	0	2	2.00
27	GCA_026967275.1	Lacticaseibacillus paracasei	Lpc_yogurt_B3	SAMN32062176	2021-07-27	USA:Chicago	-	591	0	0	2	2.00
28	GCA_026967295.1	Lacticaseibacillus paracasei	Lpc_yogurt_B2	SAMN32062175	2021-07-27	USA:Chicago	-	591	0	0	2	2.00
29	GCA_041117985.1	Lacticaseibacillus paracasei	MYA5	SAMN42930119	2022-10-21	South Korea: Gwangju	-	591	0	0	1	1.00
30	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	597	0	0	2	2.00
31	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	597	0	0	2	2.00
32	GCA_000410015.1	Lacticaseibacillus paracasei subsp. paracasei Lpp221	Lpp221	SAMN02469717	2008	-	Homo sapiens	602	0	0	2	2.00
33	GCA_000409975.1	Lacticaseibacillus paracasei subsp. paracasei Lpp123	Lpp123	SAMN02469719	2003	-	-	605	0	0	2	2.00
34	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	615	0	0	1	1.00
35	GCA_016887785.1	Lacticaseibacillus paracasei	2306	SAMN17562096	2011-06-09	Italy	-	616	0	0	2	2.00
36	GCA_026797475.1	Lacticaseibacillus paracasei	CBP-1042	SAMN27675067	-	-	-	616	0	0	2	2.00
37	GCA_028878305.1	Lacticaseibacillus paracasei	NRRL B-456	SAMN23708197	2012-01-30	Italy	-	616	0	0	2	2.00
38	GCA_000410095.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877	CNCM I-2877	SAMN02641492	2000	-	-	617	0	0	2	2.00
39	GCA_003712565.1	Lacticaseibacillus paracasei	FAM19317	SAMN04088878	1990	Switzerland	-	617	0	0	2	2.00
40	GCA_025190725.1	Lacticaseibacillus paracasei	CIRM-BIA 699	SAMN10365439	1972	-	-	617	0	0	2	2.00
41	GCA_037283385.1	Lacticaseibacillus paracasei	NRC_P4	SAMN32629231	2020-03	Egypt:Giza	cow	617	0	0	2	2.00
42	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	619	0	0	2	2.00
43	GCA_003712985.1	Lacticaseibacillus paracasei	FAM8140	SAMN04088895	-	Switzerland	-	619	0	0	2	2.00
44	GCA_030710015.1	Lacticaseibacillus paracasei	ULE721	SAMN33593465	2018-01-15	Spain:Leon	-	619	0	0	2	2.00
45	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	621	0	0	1	1.00
46	GCA_002148805.1	Lacticaseibacillus paracasei	DPC4206	SAMN06220137	1995-07	Ireland	-	621	0	0	2	2.00
47	GCA_002148885.1	Lacticaseibacillus paracasei	DPC4536	SAMN06463780	1995-11	Ireland	-	621	0	0	2	2.00
48	GCA_003434205.1	Lacticaseibacillus paracasei	AM33-2AC	SAMN09736452	2013-12-01	China: Shenzhen	Homo sapiens	621	0	0	2	2.00
49	GCA_016757675.1	Lacticaseibacillus paracasei subsp. tolerans	S-NA5	SAMN17359331	2017-12	China: Xinjiang	-	621	0	0	1	1.00
50	GCA_016757695.1	Lacticaseibacillus paracasei subsp. tolerans	S-NB	SAMN17359333	2017-12	China: Xinjiang	-	621	0	0	1	1.00
51	GCA_024498315.1	Lacticaseibacillus paracasei	SMN-LBK	SAMN29933592	2016-11-21	China: Xinjiang	-	621	0	0	1	1.00
52	GCA_024622515.1	Lacticaseibacillus paracasei	DSM 28675	SAMN29593134	2012	Germany: Freising	Mus musculus	621	0	0	2	2.00
53	GCA_028320385.1	Lacticaseibacillus paracasei	1001270st1_F8_1001270H_150608	SAMN31322638	2015-06-08	USA	Homo sapiens	621	0	0	2	2.00
54	GCA_035586595.1	Lacticaseibacillus paracasei	HP-B1337	SAMN38922877	2023-12-15	China	-	621	0	0	1	1.00
55	GCA_036281375.1	Lacticaseibacillus paracasei	CUL07A	SAMN09708453	-	-	-	621	0	0	2	2.00
56	GCA_040785095.1	Lacticaseibacillus paracasei	gbc_f	SAMN41082101	2021	USA: Glendale, Arizona	-	621	0	0	2	2.00
57	GCA_041283745.2	Lacticaseibacillus paracasei	ORD 0998	SAMN43000418	2016-01	Spain: Sevilla	Homo sapiens	621	0	0	1	1.00
58	GCA_045808845.1	Lacticaseibacillus paracasei	MSR2	SAMN45146297	2024	Bangladesh	-	621	0	0	2	2.00
59	GCA_049191845.1	Lacticaseibacillus paracasei	IATA110	SAMN45053973	2022	Spain:Valencia	Homo sapiens	621	0	0	2	2.00
60	GCA_049205075.1	Lacticaseibacillus paracasei	IATA109	SAMN45053972	2022	Spain:Valencia	Homo sapiens	621	0	0	2	2.00
61	GCA_000309785.1	Lacticaseibacillus paracasei	Lpc-37	SAMN02472013	-	-	-	622	0	0	2	2.00
62	GCA_048282615.1	Lacticaseibacillus paracasei	439	SAMN46889214	2023-12-12	China	-	622	0	0	1	1.00
63	GCA_000410235.1	Lacticaseibacillus paracasei subsp. paracasei Lpp74	Lpp74	SAMN02469728	2000	-	-	623	0	0	2	2.00
64	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	625	0	0	2	2.00
65	GCA_004141835.1	Lacticaseibacillus paracasei	SRCM103299	SAMN10849469	2018	South Korea	-	625	0	0	1	1.00
66	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	626	0	0	2	2.00
67	GCA_000410195.1	Lacticaseibacillus paracasei subsp. paracasei Lpp219	Lpp219	SAMN02469710	2008	-	Homo sapiens	626	0	0	2	2.00
68	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	626	0	0	2	2.00
69	GCA_049201625.1	Lacticaseibacillus paracasei	UBLPc-87	SAMN47217620	2018-05-05	India: Hyderabad	-	626	0	0	2	2.00
70	GCA_039631115.1	Lacticaseibacillus paracasei	L17	SAMN41249976	2023-05-30	Slovakia	-	627	0	0	2	2.00
71	GCA_039631235.1	Lacticaseibacillus paracasei	L18	SAMN41249977	2023-05-30	Slovakia	-	627	0	0	2	2.00
72	GCA_003712325.1	Lacticaseibacillus paracasei	FAM18123	SAMN04088867	2003	Switzerland	-	629	0	0	2	2.00
73	GCA_003346265.1	Lacticaseibacillus paracasei	KMB_616	SAMN09398948	2008	Slovakia	-	630	0	0	2	2.00
74	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	630	0	0	2	2.00
75	GCA_039631055.1	Lacticaseibacillus paracasei	B19	SAMN41249973	2023-04-25	Slovakia	-	630	0	0	2	2.00
76	GCA_039631065.1	Lacticaseibacillus paracasei	B18	SAMN41249972	2023-04-25	Slovakia	-	630	0	0	2	2.00
77	GCA_039631165.1	Lacticaseibacillus paracasei	B25	SAMN41249975	2023-04-25	Slovakia	-	630	0	0	2	2.00
78	GCA_039631215.1	Lacticaseibacillus paracasei	B20	SAMN41249974	2023-04-25	Slovakia	-	630	0	0	2	2.00
79	GCA_000309665.1	Lacticaseibacillus paracasei	M36	SAMN02472000	-	USA: Wisconsin	-	631	0	0	2	2.00
80	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	631	0	0	1	1.00
81	GCA_000410055.1	Lacticaseibacillus paracasei subsp. paracasei Lpp227	Lpp227	SAMN02641494	2008	-	Homo sapiens	632	0	0	2	2.00
82	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	633	0	0	1	1.00
83	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	633	0	0	2	2.00
84	GCA_003712535.1	Lacticaseibacillus paracasei	FAM18175	SAMN04088877	2003	Switzerland	-	634	0	0	2	2.00
85	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	635	0	0	2	2.00
86	GCA_003199005.1	Lacticaseibacillus paracasei	Lpc10	SAMN09283999	2014	Argentina: Provincia de Rio Negro	-	635	0	0	1	1.00
87	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	635	0	0	2	2.00
88	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	635	0	0	2	2.00
89	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	636	0	0	1	1.00
90	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	636	0	0	1	1.00
91	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	636	0	0	2	2.00
92	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	636	0	0	2	2.00
93	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	636	0	0	2	2.00
94	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	636	0	0	2	2.00
95	GCA_022614605.1	Lacticaseibacillus paracasei	GMNL-653	SAMN22548460	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	636	0	0	1	1.00
96	GCA_028993835.1	Lacticaseibacillus paracasei	ARN1	SAMN33449985	2021-08-01	Turkey:Ankara	bacteria	636	0	0	2	2.00
97	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	637	0	0	2	2.00
98	GCA_003712265.1	Lacticaseibacillus paracasei	FAM18110	SAMN04088863	2003	Switzerland	-	637	0	0	2	2.00
99	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	637	0	0	1	1.00
100	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	637	0	0	2	2.00