QueryID	Family	Cluster	IsBegin	IsEnd	IrId	IrLen	Ngaps	OrfBegin	OrfEnd	Strand	OrfLen	Evalue	Type
NJCPCAPF_1	IS21	IS21_259	72	1571	11	14	0	1	1317	+	1317	1.4e-11	p
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	88205	89806	0	0	0	0	0		1	5.7e-128	c
NJCPCAPF_1	IS256	IS256_128	89878	91208	21	28	0	0	0		1	5.8e-160	c
NJCPCAPF_1	IS256	IS256_128	103209	104539	21	28	0	103275	104495	+	1221	5.8e-160	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	105018	106017	0	0	0	0	0		1	5.7e-128	c
NJCPCAPF_1	IS30	IS30_223	113699	114666	21	26	0	113801	114571	+	771	4.3e-67	p
NJCPCAPF_1	IS30	IS30_223	116160	117213	21	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS256	IS256_510	126753	127458	12	12	0	127124	127462	-	339	6e-61	p
NJCPCAPF_1	IS30	IS30_223	127477	128530	21	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS3	IS3_176	132626	134308	21	26	0	132691	133886	-	1196	1.8e-44	p
NJCPCAPF_1	IS30	IS30_223	134337	135391	22	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS256	IS256_128	135527	136833	21	28	0	0	0		1	5.8e-160	c
NJCPCAPF_1	IS30	IS30_241	178388	179446	17	19	0	178400	179365	-	966	3e-122	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	184654	186574	0	0	0	0	0		1	4.6e-188	c
NJCPCAPF_1	IS30	IS30_241	187268	188322	17	19	0	187345	188310	+	966	3e-122	c
NJCPCAPF_1	IS30	IS30_223	222979	224043	21	26	0	0	0		1	6e-90	c
NJCPCAPF_1	IS3	IS3_176	274908	275643	16	19	0	274847	275236	+	390	1.1e-18	p
NJCPCAPF_1	IS30	IS30_223	281521	282063	12	13	0	281402	282118	+	717	5.2e-56	p
NJCPCAPF_1	IS30	IS30_173	286093	287187	28	40	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_241	287290	288348	17	19	0	287302	288267	-	966	3e-122	c
NJCPCAPF_1	ISL3	ISL3_126	288371	289654	6	6	0	0	0		1	1.5e-53	p
NJCPCAPF_1	IS30	IS30_223	289833	291122	16	22	0	0	0		1	2.6e-68	c
NJCPCAPF_1	ISL3	ISL3_126	299608	301078	20	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS30	IS30_173	321997	323091	29	41	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_173	325908	327265	13	16	0	325889	326833	-	945	8.8e-101	c
NJCPCAPF_1	IS701	IS701_211	326863	328424	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS30	IS30_173	358459	359553	29	41	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS256	IS256_162	359629	361049	21	26	0	359687	360935	-	1249	2.4e-146	c
NJCPCAPF_1	IS701	IS701_211	371506	373067	13	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS701	IS701_211	385461	387022	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS30	IS30_173	431022	432116	28	40	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_173	468061	469155	27	39	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS701	IS701_211	469639	471202	15	15	0	0	0		1	2.9e-13	c
NJCPCAPF_1	ISL3	ISL3_126	474654	476124	20	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	489234	491243	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS3	IS3_543	537797	538863	10	13	0	0	0		1	1.3e-43	c
NJCPCAPF_1	IS30	IS30_241	541204	542262	17	19	0	0	0		1	3e-122	c
NJCPCAPF_1	IS30	IS30_223	588715	589769	22	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS3	IS3_97	602331	603827	24	27	0	0	0		1	1.9e-123	c
NJCPCAPF_1	IS30	IS30_223	604622	605676	21	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS30	IS30_223	663042	664331	16	22	0	663146	664285	+	1140	2.6e-68	c
NJCPCAPF_1	IS5	IS5_302	664347	665203	33	46	1	664364	665139	-	776	2.5e-53	c
NJCPCAPF_1	IS256	IS256_162	701926	703279	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	703298	704898	0	0	0	0	0		1	5.7e-128	c
NJCPCAPF_1	IS256	IS256_162	712138	713491	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS701	IS701_211	713541	715101	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	715051	715329	0	0	0	715051	715329	+	279	7.7e-25	p
NJCPCAPF_1	IS30	IS30_223	721936	722965	15	23	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS30	IS30_223	722990	724279	16	22	0	0	0		1	2.6e-68	c
NJCPCAPF_1	IS30	IS30_241	731625	732621	41	69	0	731922	732242	+	321	4.1e-34	p
NJCPCAPF_1	IS256	IS256_128	732213	733543	21	28	0	0	0		1	5.8e-160	c
NJCPCAPF_1	IS30	IS30_223	735847	737136	16	22	0	735893	737032	-	1140	2.6e-68	c
NJCPCAPF_1	IS256	IS256_162	737160	737426	0	0	0	737160	737426	+	267	2.5e-30	p
NJCPCAPF_1	IS30	IS30_223	737464	738519	28	36	1	0	0		1	1.7e-101	c
NJCPCAPF_1	IS256	IS256_162	740709	742063	19	23	0	740821	742008	+	1188	6.4e-166	c
NJCPCAPF_1	IS30	IS30_223	780594	781533	25	37	0	780745	781453	+	709	4.5e-31	p
NJCPCAPF_1	IS3	IS3_176	781495	782461	7	9	0	0	0		1	1.9e-49	p
NJCPCAPF_1	IS30	IS30_223	782527	783815	16	22	0	0	0		1	2.6e-68	c
NJCPCAPF_1	ISL3	ISL3_126	786353	787125	6	6	0	0	0		1	1.5e-53	p
NJCPCAPF_1	IS30	IS30_223	787252	788307	47	69	1	787630	788277	+	648	1.6e-76	c
NJCPCAPF_1	IS256	IS256_162	799212	800566	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_223	805751	806806	22	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS30	IS30_173	807665	808759	27	38	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	810365	812374	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS30	IS30_223	840760	843041	25	36	1	841203	842782	+	1580	5.8e-41	p
NJCPCAPF_1	ISL3	ISL3_126	849175	850645	20	26	0	849327	850613	+	1287	1.5e-53	c
NJCPCAPF_1	IS256	IS256_128	863152	864482	22	28	0	0	0		1	5.8e-160	c
NJCPCAPF_1	IS30	IS30_223	864711	864922	0	0	0	864711	864922	+	212	4.2e-24	p
NJCPCAPF_1	IS3	IS3_97	963934	965430	24	27	0	963965	965385	-	1421	1.9e-123	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_164	974400	975482	0	0	0	974400	975482	-	1083	2e-105	c
NJCPCAPF_1	IS30	IS30_223	975522	976556	16	22	0	975568	976452	-	885	7.5e-32	p
NJCPCAPF_1	IS3	IS3_206	977004	977975	9	9	0	0	0		1	1.2e-49	p
NJCPCAPF_1	IS256	IS256_128	981841	983147	23	28	0	0	0		1	5.8e-160	c
NJCPCAPF_1	IS3	IS3_176	985646	986957	6	7	0	985542	987045	-	1504	1.9e-49	p
NJCPCAPF_1	IS256	IS256_162	987003	988357	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS3	IS3_472	988499	988925	6	7	0	988547	988834	+	288	1.7e-17	p
NJCPCAPF_1	IS3	IS3_206	988756	989727	9	9	0	0	0		1	1.2e-49	p
NJCPCAPF_1	ISL3	ISL3_126	997378	998739	10	13	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS30	IS30_173	998766	999862	29	41	0	998827	999852	+	1026	1.1e-108	c
NJCPCAPF_1	IS30	IS30_223	999790	1000424	12	14	0	999988	1000365	+	378	4.5e-39	p
NJCPCAPF_1	IS30	IS30_173	1029902	1030996	28	40	0	0	0		1	1.1e-108	c
NJCPCAPF_1	ISL3	ISL3_126	1043234	1044513	6	6	0	0	0		1	1.5e-53	p
NJCPCAPF_1	IS30	IS30_241	1047330	1048388	17	19	0	1047342	1048307	-	966	3e-122	c
NJCPCAPF_1	IS3	IS3_472	1057920	1058346	6	7	0	0	0		1	1.7e-17	p
NJCPCAPF_1	IS256	IS256_162	1058379	1059732	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS3	IS3_97	1061913	1063409	24	27	0	1061944	1063364	-	1421	1.9e-123	c
NJCPCAPF_1	IS701	IS701_211	1064292	1065710	0	0	0	1064364	1065593	-	1230	2.9e-13	p
NJCPCAPF_1	IS30	IS30_241	1065718	1066776	17	19	0	1065730	1066695	-	966	3e-122	c
NJCPCAPF_1	IS3	IS3_176	1089270	1089642	16	19	1	0	0		1	1.9e-49	p
NJCPCAPF_1	IS3	IS3_176	1089697	1090615	7	7	0	0	0		1	1.9e-49	p
NJCPCAPF_1	IS256	IS256_162	1090663	1092017	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1097038	1098167	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1098164	1098966	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS30	IS30_223	1099543	1100832	17	22	0	1099589	1100728	-	1140	2.6e-68	c
NJCPCAPF_1	IS256	IS256_162	1130098	1131452	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_223	1146965	1148019	21	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS30	IS30_241	1163098	1164156	17	19	0	1163179	1164144	+	966	3e-122	c
NJCPCAPF_1	IS3	IS3_206	1192224	1192999	0	0	0	1192332	1192946	+	615	1.2e-49	p
NJCPCAPF_1	IS256	IS256_162	1192999	1193896	21	26	0	1192985	1193782	-	798	4.6e-93	p
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1198281	1200108	0	0	0	1198456	1199706	-	1251	4.6e-188	c
NJCPCAPF_1	IS256	IS256_162	1200109	1201476	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_173	1206822	1207916	29	40	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS256	IS256_162	1229462	1230816	19	23	0	1229574	1230761	+	1188	6.4e-166	c
NJCPCAPF_1	IS701	IS701_211	1249247	1250808	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	ISL3	ISL3_126	1263203	1264673	21	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS256	IS256_162	1264679	1266011	11	12	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_223	1265795	1266758	16	20	0	1265978	1266496	-	519	1e-39	p
NJCPCAPF_1	IS30	IS30_223	1270015	1271304	16	22	0	1270061	1271200	-	1140	2.6e-68	c
NJCPCAPF_1	IS30	IS30_223	1357053	1358109	22	27	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS30	IS30_241	1358421	1359484	19	24	0	1358510	1359472	+	963	2.5e-126	c
NJCPCAPF_1	IS256	IS256_162	1364756	1366110	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	ISL3	ISL3_126	1390840	1392123	6	6	0	0	0		1	1.5e-53	p
NJCPCAPF_1	IS30	IS30_223	1392138	1393197	24	29	0	1392202	1393164	+	963	1.7e-101	c
NJCPCAPF_1	IS30	IS30_223	1412330	1413408	51	82	1	1412502	1413257	+	756	5.7e-67	c
NJCPCAPF_1	IS30	IS30_223	1506330	1507384	22	26	0	0	0		1	1.7e-101	c
NJCPCAPF_1	IS256	IS256_162	1510464	1511818	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS256	IS256_162	1520069	1521422	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_223	1521493	1522557	21	26	0	0	0		1	6e-90	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	1534901	1535396	0	0	0	0	0		1	3.1e-76	c
NJCPCAPF_1	IS701	IS701_211	1535949	1537510	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	1537513	1538327	0	0	0	0	0		1	3.1e-76	c
NJCPCAPF_1	ISL3	ISL3_126	1562222	1563692	20	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS30	IS30_241	1574451	1575936	13	15	0	1574787	1575449	-	663	3.2e-42	p
NJCPCAPF_1	IS30	IS30_223	1575496	1576784	16	22	0	0	0		1	2.6e-68	c
NJCPCAPF_1	IS701	IS701_211	1576842	1578403	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS256	IS256_162	1582527	1583880	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_173	1585105	1586199	26	38	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_173	1587955	1589049	29	41	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_241	1589137	1590195	17	19	0	1589218	1590183	+	966	3e-122	c
NJCPCAPF_1	IS701	IS701_211	1591181	1592742	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS30	IS30_173	1685343	1686558	22	31	0	1685531	1686475	-	945	3.4e-100	c
NJCPCAPF_1	IS256	IS256_162	1686506	1687860	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	1691138	1692737	0	0	0	0	0		1	5.7e-128	c
NJCPCAPF_1	IS701	IS701_211	1692788	1694349	14	14	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS30	IS30_241	1695950	1697013	19	24	0	0	0		1	2.5e-126	c
NJCPCAPF_1	IS30	IS30_223	1722531	1723595	21	26	0	1722546	1723478	-	933	6e-90	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	1725646	1727247	0	0	0	0	0		1	5.7e-128	c
NJCPCAPF_1	IS256	IS256_162	1730649	1732002	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1735523	1737532	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1769132	1770728	0	0	0	1769305	1770555	-	1251	1.8e-181	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1796842	1798444	0	0	0	0	0		1	1.8e-181	c
NJCPCAPF_1	IS3	IS3_543	1798458	1799503	7	8	0	1798525	1799225	+	701	1.3e-43	p
NJCPCAPF_1	IS256	IS256_162	1799551	1800905	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS30	IS30_241	1806473	1807530	17	19	0	0	0		1	3e-122	c
NJCPCAPF_1	IS30	IS30_223	1812196	1813590	15	19	0	1812448	1813244	-	797	4.6e-50	p
NJCPCAPF_1	IS701	IS701_211	1831782	1833326	15	15	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1843354	1845363	0	0	0	1843527	1844777	-	1251	1.8e-181	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	1872946	1874530	0	0	0	1873065	1874228	-	1164	5.7e-128	c
NJCPCAPF_1	IS30	IS30_223	1874530	1875589	30	38	1	0	0		1	1.7e-101	c
NJCPCAPF_1	ISL3	ISL3_126	1879084	1880554	20	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS256	IS256_162	1882197	1883551	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	IS3	IS3_61	1883063	1885055	13	14	1	1883544	1884721	-	1178	2.7e-60	p
NJCPCAPF_1	IS30	IS30_173	1889994	1891088	28	40	0	0	0		1	1.1e-108	c
NJCPCAPF_1	IS30	IS30_223	1915661	1916725	21	26	0	0	0		1	6e-90	c
NJCPCAPF_1	IS30	IS30_223	1955750	1956814	21	26	0	0	0		1	6e-90	c
NJCPCAPF_1	ISL3	ISL3_126	1983640	1985119	21	27	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_132	1989329	1991249	0	0	0	0	0		1	4.6e-188	c
NJCPCAPF_1	IS256	IS256_162	1991248	1992602	19	23	0	0	0		1	6.4e-166	c
NJCPCAPF_1	ISL3	ISL3_126	1992630	1994099	20	26	0	0	0		1	1.5e-53	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	2008412	2008907	0	0	0	0	0		1	3.1e-76	c
NJCPCAPF_1	IS701	IS701_211	2008905	2010449	15	15	0	0	0		1	2.9e-13	c
NJCPCAPF_1	IS200/IS605	IS200/IS605_96	2010445	2011634	0	0	0	0	0		1	3.1e-76	c
NJCPCAPF_2	IS3	IS3_176	7364	8294	12	12	0	7581	7952	+	372	5.1e-18	p
NJCPCAPF_2	IS701	IS701_211	17043	18608	16	16	0	17116	18570	-	1455	4.6e-13	p
