GCA_047459955.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEHLLFDCL_1 (original name was: gnl|Prokka|EHLLFDCL_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	56,411	66,707
Region 1.2	T3PKS	223,493	245,481

gnlProkkaEHLLFDCL_8 (original name was: gnl|Prokka|EHLLFDCL_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	60,166	82,962

gnlProkkaEHLLFDCL_13 (original name was: gnl|Prokka|EHLLFDCL_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	45,723	54,252

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	56,411	66,707
Region 1.2	T3PKS	223,493	245,481
Region 8.1	RiPP-like	60,166	82,962
Region 13.1	RiPP-like	45,723	54,252

No secondary metabolite regions were found in these records:: gnlProkkaEHLLFDCL_2 (original name was: gnl|Prokka|EHLLFDCL_2); gnlProkkaEHLLFDCL_3 (original name was: gnl|Prokka|EHLLFDCL_3); gnlProkkaEHLLFDCL_4 (original name was: gnl|Prokka|EHLLFDCL_4); gnlProkkaEHLLFDCL_5 (original name was: gnl|Prokka|EHLLFDCL_5); gnlProkkaEHLLFDCL_6 (original name was: gnl|Prokka|EHLLFDCL_6); gnlProkkaEHLLFDCL_7 (original name was: gnl|Prokka|EHLLFDCL_7); gnlProkkaEHLLFDCL_9 (original name was: gnl|Prokka|EHLLFDCL_9); gnlProkkaEHLLFDCL_10 (original name was: gnl|Prokka|EHLLFDCL_10); gnlProkkaEHLLFDCL_11 (original name was: gnl|Prokka|EHLLFDCL_11); gnlProkkaEHLLFDCL_12 (original name was: gnl|Prokka|EHLLFDCL_12); gnlProkkaEHLLFDCL_14 (original name was: gnl|Prokka|EHLLFDCL_14); gnlProkkaEHLLFDCL_15 (original name was: gnl|Prokka|EHLLFDCL_15); gnlProkkaEHLLFDCL_16 (original name was: gnl|Prokka|EHLLFDCL_16); gnlProkkaEHLLFDCL_17 (original name was: gnl|Prokka|EHLLFDCL_17); gnlProkkaEHLLFDCL_18 (original name was: gnl|Prokka|EHLLFDCL_18); gnlProkkaEHLLFDCL_19 (original name was: gnl|Prokka|EHLLFDCL_19); gnlProkkaEHLLFDCL_20 (original name was: gnl|Prokka|EHLLFDCL_20); gnlProkkaEHLLFDCL_21 (original name was: gnl|Prokka|EHLLFDCL_21); gnlProkkaEHLLFDCL_22 (original name was: gnl|Prokka|EHLLFDCL_22); gnlProkkaEHLLFDCL_23 (original name was: gnl|Prokka|EHLLFDCL_23); gnlProkkaEHLLFDCL_24 (original name was: gnl|Prokka|EHLLFDCL_24); gnlProkkaEHLLFDCL_25 (original name was: gnl|Prokka|EHLLFDCL_25); gnlProkkaEHLLFDCL_26 (original name was: gnl|Prokka|EHLLFDCL_26); gnlProkkaEHLLFDCL_27 (original name was: gnl|Prokka|EHLLFDCL_27); gnlProkkaEHLLFDCL_28 (original name was: gnl|Prokka|EHLLFDCL_28); gnlProkkaEHLLFDCL_29 (original name was: gnl|Prokka|EHLLFDCL_29); gnlProkkaEHLLFDCL_30 (original name was: gnl|Prokka|EHLLFDCL_30); gnlProkkaEHLLFDCL_31 (original name was: gnl|Prokka|EHLLFDCL_31); gnlProkkaEHLLFDCL_32 (original name was: gnl|Prokka|EHLLFDCL_32); gnlProkkaEHLLFDCL_33 (original name was: gnl|Prokka|EHLLFDCL_33); gnlProkkaEHLLFDCL_34 (original name was: gnl|Prokka|EHLLFDCL_34); gnlProkkaEHLLFDCL_35 (original name was: gnl|Prokka|EHLLFDCL_35); gnlProkkaEHLLFDCL_36 (original name was: gnl|Prokka|EHLLFDCL_36); gnlProkkaEHLLFDCL_37 (original name was: gnl|Prokka|EHLLFDCL_37)

Compact view

gnlProkkaEHLLFDCL_1 - Region 1 - RiPP-like

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Location: 56,411 - 66,707 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEHLLFDCL_1 - Region 2 - T3PKS

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Location: 223,493 - 245,481 nt. (total: 21,989 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEHLLFDCL_8 - Region 1 - RiPP-like

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Location: 60,166 - 82,962 nt. (total: 22,797 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEHLLFDCL_13 - Region 1 - RiPP-like

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Location: 45,723 - 54,252 nt. (total: 8,530 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.