Select genomic region:
Overview
5.1
7.1
8.1
8.2
11.1
36.1

### Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJJPBDDGL_5 (original name was: gnl|Prokka|JJPBDDGL_5)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 5.1 | T3PKS | 1,951 | 43,117 |

gnlProkkaJJPBDDGL_7 (original name was: gnl|Prokka|JJPBDDGL_7)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 7.1 | RiPP-like | 75,557 | 87,653 | quinolidomicin A | Polyketide | 3%

gnlProkkaJJPBDDGL_8 (original name was: gnl|Prokka|JJPBDDGL_8)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 8.1 | lassopeptide | 23,069 | 47,285 | cochonodin I | RiPP | 100%
Region 8.2 | LAP,thiopeptide | 51,373 | 83,303 |

gnlProkkaJJPBDDGL_11 (original name was: gnl|Prokka|JJPBDDGL_11)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 11.1 | RiPP-like | 80,431 | 96,046 |

gnlProkkaJJPBDDGL_36 (original name was: gnl|Prokka|JJPBDDGL_36)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 36.1 | lanthipeptide-class-ii | 1 | 5,360 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 5.1 | T3PKS | 1,951 | 43,117 |
Region 7.1 | RiPP-like | 75,557 | 87,653 | quinolidomicin A | Polyketide | 3%
Region 8.1 | lassopeptide | 23,069 | 47,285 | cochonodin I | RiPP | 100%
Region 8.2 | LAP,thiopeptide | 51,373 | 83,303 |
Region 11.1 | RiPP-like | 80,431 | 96,046 |
Region 36.1 | lanthipeptide-class-ii | 1 | 5,360 |

No secondary metabolite regions were found in these records:
  gnlProkkaJJPBDDGL_1 (original name was: gnl|Prokka|JJPBDDGL_1)
  gnlProkkaJJPBDDGL_2 (original name was: gnl|Prokka|JJPBDDGL_2)
  gnlProkkaJJPBDDGL_3 (original name was: gnl|Prokka|JJPBDDGL_3)
  gnlProkkaJJPBDDGL_4 (original name was: gnl|Prokka|JJPBDDGL_4)
  gnlProkkaJJPBDDGL_6 (original name was: gnl|Prokka|JJPBDDGL_6)
  gnlProkkaJJPBDDGL_9 (original name was: gnl|Prokka|JJPBDDGL_9)
  gnlProkkaJJPBDDGL_10 (original name was: gnl|Prokka|JJPBDDGL_10)
  gnlProkkaJJPBDDGL_12 (original name was: gnl|Prokka|JJPBDDGL_12)
  gnlProkkaJJPBDDGL_13 (original name was: gnl|Prokka|JJPBDDGL_13)
  gnlProkkaJJPBDDGL_14 (original name was: gnl|Prokka|JJPBDDGL_14)
  gnlProkkaJJPBDDGL_15 (original name was: gnl|Prokka|JJPBDDGL_15)
  gnlProkkaJJPBDDGL_16 (original name was: gnl|Prokka|JJPBDDGL_16)
  gnlProkkaJJPBDDGL_17 (original name was: gnl|Prokka|JJPBDDGL_17)
  gnlProkkaJJPBDDGL_18 (original name was: gnl|Prokka|JJPBDDGL_18)
  gnlProkkaJJPBDDGL_19 (original name was: gnl|Prokka|JJPBDDGL_19)
  gnlProkkaJJPBDDGL_20 (original name was: gnl|Prokka|JJPBDDGL_20)
  gnlProkkaJJPBDDGL_21 (original name was: gnl|Prokka|JJPBDDGL_21)
  gnlProkkaJJPBDDGL_22 (original name was: gnl|Prokka|JJPBDDGL_22)
  gnlProkkaJJPBDDGL_23 (original name was: gnl|Prokka|JJPBDDGL_23)
  gnlProkkaJJPBDDGL_24 (original name was: gnl|Prokka|JJPBDDGL_24)
  gnlProkkaJJPBDDGL_25 (original name was: gnl|Prokka|JJPBDDGL_25)
  gnlProkkaJJPBDDGL_26 (original name was: gnl|Prokka|JJPBDDGL_26)
  gnlProkkaJJPBDDGL_27 (original name was: gnl|Prokka|JJPBDDGL_27)
  gnlProkkaJJPBDDGL_28 (original name was: gnl|Prokka|JJPBDDGL_28)
  gnlProkkaJJPBDDGL_29 (original name was: gnl|Prokka|JJPBDDGL_29)
  gnlProkkaJJPBDDGL_30 (original name was: gnl|Prokka|JJPBDDGL_30)
  gnlProkkaJJPBDDGL_31 (original name was: gnl|Prokka|JJPBDDGL_31)
  gnlProkkaJJPBDDGL_32 (original name was: gnl|Prokka|JJPBDDGL_32)
  gnlProkkaJJPBDDGL_33 (original name was: gnl|Prokka|JJPBDDGL_33)
  gnlProkkaJJPBDDGL_34 (original name was: gnl|Prokka|JJPBDDGL_34)
  gnlProkkaJJPBDDGL_35 (original name was: gnl|Prokka|JJPBDDGL_35)
  gnlProkkaJJPBDDGL_37 (original name was: gnl|Prokka|JJPBDDGL_37)
  gnlProkkaJJPBDDGL_38 (original name was: gnl|Prokka|JJPBDDGL_38)
  gnlProkkaJJPBDDGL_39 (original name was: gnl|Prokka|JJPBDDGL_39)
  gnlProkkaJJPBDDGL_40 (original name was: gnl|Prokka|JJPBDDGL_40)
  gnlProkkaJJPBDDGL_41 (original name was: gnl|Prokka|JJPBDDGL_41)
  gnlProkkaJJPBDDGL_42 (original name was: gnl|Prokka|JJPBDDGL_42)
  gnlProkkaJJPBDDGL_43 (original name was: gnl|Prokka|JJPBDDGL_43)
  gnlProkkaJJPBDDGL_44 (original name was: gnl|Prokka|JJPBDDGL_44)
  gnlProkkaJJPBDDGL_45 (original name was: gnl|Prokka|JJPBDDGL_45)
  gnlProkkaJJPBDDGL_46 (original name was: gnl|Prokka|JJPBDDGL_46)
  gnlProkkaJJPBDDGL_47 (original name was: gnl|Prokka|JJPBDDGL_47)
  gnlProkkaJJPBDDGL_48 (original name was: gnl|Prokka|JJPBDDGL_48)
  gnlProkkaJJPBDDGL_49 (original name was: gnl|Prokka|JJPBDDGL_49)
  gnlProkkaJJPBDDGL_50 (original name was: gnl|Prokka|JJPBDDGL_50)
  gnlProkkaJJPBDDGL_51 (original name was: gnl|Prokka|JJPBDDGL_51)
  gnlProkkaJJPBDDGL_52 (original name was: gnl|Prokka|JJPBDDGL_52)

Compact view
gnlProkkaJJPBDDGL_5 - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,951 - 43,117 nt. (total: 41,167 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJJPBDDGL_7 - Region 1 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 75,557 - 87,653 nt. (total: 12,097 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaJJPBDDGL_8 - Region 1 - lassopeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 23,069 - 47,285 nt. (total: 24,217 nt) Show pHMM detection rules used
lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lasso peptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Lasso peptide predictions
Lists the possible core peptides for each biosynthetic enzyme. Each core peptide shows the leader and core peptide sequences.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Lassopeptide(s) for ctg8_26

ctg8_26
Leader:
MNYTKPVIEKISTFKSGTS
Full core:
G L V A G R F R D I F G G R A L F L I R I
Putative macrolactam:
G L V A G R F R D

#### antiSMASH-DB 4.0 matches for ctg8_26

100.0% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L V A G R F R D I F G G R A L F L I R I
1
G L V A G R F R D I F G G R A L F L I R I
21
95.2% NZ_FILX01000006.1 and 2 others:
NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptide NZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide
Lassopeptides: A1363_RS11380_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L V A G F R D I F G G R A L F L I R I
1
G L V A G S F R D I F G G R A L F L I R I
21
65.2% NC_012468.1 and 9 others:
NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptide NZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptide NZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptide NZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptide NZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptide NZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptide NZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptide NZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptide NZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide
Lassopeptides: SP70585_RS13230_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G+F R D I F G G R A+ I R I
1
G L W T G K F R D I F G G R A I V R I R I
21
with 23 more sequence matches
65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G+F R D+F G G R A L F I I
1
G L W T G K F R D V F G G R A L F Q I V I
21
60.9% NC_021023.1 and 25 others:
NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptide NZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptide NZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptide NZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptide NZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptide NZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptide NZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptide NZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptide NZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptide NZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptide NZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptide NZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptide NZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptide NZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptide NZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptide NZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptide NZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptide NZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptide NZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptide NZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptide NZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptide NZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptide NZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptide NZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptide NZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide
Lassopeptides: ENT_RS07390_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G+F R D+F G G R A L F + I
1
G L W T G K F R D V F G G R A L F Q V V I
21
60.9% NZ_NCVL01000001.1 and 1 other:
NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide
Lassopeptides: B7694_RS10650_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G+F D I F G G R A+F I I
1
G L W F G K F T D I F G G R A V F Q I V I
21
56.5% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G F R D+F G G R A+ +R I
1
G L W T G N F R D V F G G R A I V R V R I
21
52.4% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R
20
G L G+F+D+F G G R A+ I
1
G L W T G K F K D L F G G R A V I K I E
20
52.2% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G++ D+F G G R A L I I
1
G L W T G K Y T D V F G G R A L I K I I I
21
52.2% NZ_FILX01000006.1 and 1 other:
NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide
Lassopeptides: allorf_42148_42276_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G+F R D+F G G R A+ + I
1
G L W T G K F R D V F G G R A I V R V T I
21
52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G++ D I F G G R A+ I I
1
G L C F G K W N D I F G G R A I I K I E I
21
52.2% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G L G++ D I F G G R A+ I I
1
G L W T G K W T D I F G G R A I I K I E I
21
50.0% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G+ G R+R D I F G G R A + +
1
G V W F G R W R D I F G G R A F V K V D V
21
50.0% NZ_JADKSM010000003.1 and 2 others:
NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptide NZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide
Lassopeptides: ITJ61_RS18070_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R I
21
G+ G R+R D I F G G R A + +
1
G V W F G R W R D I F G G R A F I K V T V
21
47.6% NZ_JAMDLY010000010.1 and 4 others:
NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptide NZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptide NZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptide NZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide
Lassopeptides: M5X04_RS09885_lassopeptide
1
G L V A G R F R D I F G G R A L
16
G+ G R+R D+ G G R A L
1
G I W F G R Y R D V L G G R A L
16
45.5% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide
1
G L V A G R F R D I F G G R A L F
17
G L G+F R D I F G + F
1
G L W Y G K F R D I F G A K T Y F
17
42.9% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide
8
R D I F G G R A L F L I R
20
R D I F G R A L +I
8
R D I F G Y R A L I V I H
20
42.9% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R
20
G+ G++ D I F G G R A +
1
G V W F G K W T D I F G G R A F I H V E
20
39.1% NZ_FNCN01000047.1: Lassopeptides: BLQ73_RS31810_lassopeptide
4
A G R F R D I F G G R A L F L I R
20
+ R R D I G R A L +I
4
S A R E R D I L G F R A L I V I H
20
38.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide
1
G L V A G R F R D I F G G R A L
16
G +R D I F G G R
1
G Y P W W D Y R D I F G G R T F
16
38.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide
1
G L V A G R F R D I F G G R A L F L I R
20
G A G++ D++G G+A I
1
G F F A G K W T D V Y G G K A F V R I E
20
38.1% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide
1
G L V A G R F R D I F G G R A L F L I
19
G+ G R++D+F G G+A +
1
G V W F G R W K D V F G G K A F I A V
19
33.3% NZ_NCVC01000017.1: Lassopeptides: B7703_RS09865_lassopeptide
4
A G R F R D I F G G R A L F L I R
20
R R D+ G R A L +I
4
T A R E R D L L G F R A L I V I H
20
28.6% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide
1
G L V A G R F R D I F G G R A L
16
G +R D+F G G
1
G Y P W W D Y R D L F G G H T F
16
27.3% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide
5
G R F R D I F G G R
14
G R+ D +G G R
5
G R W N D Y Y G G R
14
23.8% NZ_JAJQQQ010000018.1: Lassopeptides: LUZ28_RS25695_lassopeptide
8
R D I F G G R A L F
17
+D I G G+ L
7
K D I L G G K Q L L
16

#### Lassopeptide(s) for ctg8_27

ctg8_27
Leader:
MKYCKPTFEPIATFKKDTK
Full core:
G L W T G N F R D V F G G R A I V R V R I E F
Putative macrolactam:
G L W T G N F R D

#### antiSMASH-DB 4.0 matches for ctg8_27

100.0% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G N F R D V F G G R A I V R V R I E F
1
G L W T G N F R D V F G G R A I V R V R I E F
23
91.3% NZ_FILX01000006.1 and 1 other:
NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide
Lassopeptides: allorf_42148_42276_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G F R D V F G G R A I V R V I E F
1
G L W T G K F R D V F G G R A I V R V T I E F
23
87.0% NC_012468.1 and 9 others:
NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptide NZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptide NZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptide NZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptide NZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptide NZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptide NZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptide NZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptide NZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide
Lassopeptides: SP70585_RS13230_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G F R D+F G G R A I V R+R I E F
1
G L W T G K F R D I F G G R A I V R I R I E F
23
with 22 more sequence matches
69.6% NC_021023.1 and 25 others:
NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptide NZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptide NZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptide NZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptide NZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptide NZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptide NZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptide NZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptide NZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptide NZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptide NZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptide NZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptide NZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptide NZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptide NZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptide NZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptide NZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptide NZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptide NZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptide NZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptide NZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptide NZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptide NZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptide NZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptide NZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide
Lassopeptides: ENT_RS07390_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G F R D V F G G R A+ +V I +
1
G L W T G K F R D V F G G R A L F Q V V I Y Y
23
65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G F R D V F G G R A+ ++ I +
1
G L W T G K F R D V F G G R A L F Q I V I Y Y
23
60.9% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W T G + D+F G G R A I+++ I F
1
G L W T G K W T D I F G G R A I I K I E I G F
23
56.5% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E
22
G L W T G + D V F G G R A++++ I+
1
G L W T G K Y T D V F G G R A L I K I I I Q
22
56.5% NZ_FILX01000006.1 and 2 others:
NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptide NZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide
Lassopeptides: A1363_RS11380_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I
21
G L G+F R D+F G G R A+ +R I
1
G L V A G S F R D I F G G R A L F L I R I
21
56.5% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I
21
G L G F R D+F G G R A+ +R I
1
G L V A G R F R D I F G G R A L F L I R I
21
52.2% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I
21
G+W G +R D+F G G R A V+V +
1
G V W F G R W R D I F G G R A F V K V D V
21
52.2% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R
20
G L W T G F+D+F G G R A++++
1
G L W T G K F K D L F G G R A V I K I E
20
52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L G + D+F G G R A I+++ I F
1
G L C F G K W N D I F G G R A I I K I E I G F
23
52.2% NZ_NCVL01000001.1 and 1 other:
NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide
Lassopeptides: B7694_RS10650_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I E F
23
G L W G F D+F G G R A+ ++ I +
1
G L W F G K F T D I F G G R A V F Q I V I N Y
23
47.8% NZ_JADKSM010000003.1 and 2 others:
NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptide NZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide
Lassopeptides: ITJ61_RS18070_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R I
21
G+W G +R D+F G G R A ++V +
1
G V W F G R W R D I F G G R A F I K V T V
21
47.8% NZ_JAMDLY010000010.1 and 4 others:
NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptide NZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptide NZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptide NZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide
Lassopeptides: M5X04_RS09885_lassopeptide
1
G L W T G N F R D V F G G R A I V R V
19
G+W G +R D V G G R A+ R+
1
G I W F G R Y R D V L G G R A L T R I
19
43.5% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R
20
G+W G + D+F G G R A + V
1
G V W F G K W T D I F G G R A F I H V E
20
43.5% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide
1
G L W T G N F R D V F G G R A I V R V
19
G+W G ++D V F G G+A + V
1
G V W F G R W K D V F G G K A F I A V
19
39.1% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide
1
G L W T G N F R D V F G G R A I V R V
19
G L W G F R D+F G + +
1
G L W Y G K F R D I F G A K T Y F N L
19
39.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R
20
G + G + D V+G G+A V R+
1
G F F A G K W T D V Y G G K A F V R I E
20
34.8% NZ_CP062951.1 and 1 other:
NZ_CP071248.1 Lassopeptides: BLI009_RS05010_lassopeptide
Lassopeptides: BL1347_RS03935_lassopeptide
1
G L W T G N F R D V F G G R A
15
G+W G N+ D V G +A
1
G V W F G N Y V D V G G A K A
15
34.8% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide
1
G L W T G N F R D V F G G R A I V R V
19
G W G + D +G G R +R+
1
G G W R G R W N D Y Y G G R Y G L R I
19
30.4% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide
1
G L W T G N F R D V F G G R A I V R V R
20
L + + R D+F G R A++ +
1
S L G S A D E R D I F G Y R A L I V I H
20
26.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide
6
N F R D V F G G R A I V
17
++R D+F G G R +
6
D Y R D I F G G R T F I
17
21.7% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide
6
N F R D V F G G R A I V
17
++R D+F G G +
6
D Y R D L F G G H T F I
17
20.7% NZ_KE384107.1 and 1 other:
NZ_KE384107.1 Lanthipeptides: G586_RS0119020_lanthipeptide
Lanthipeptides: G586_RS0119020_lanthipeptide
3
W T G N F R D V F G G R A I
16
W G N F G R +
2
W Y G N L E H F F G H R D L
15

#### Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine
Lasso peptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of disulfide bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.

ctg8_26 - Class II
  Cleavage pHMM score: -8.10
  RODEO score: 18
  Monoisotopic mass: 2328.4 Da
  Molecular weight: 2329.8 Da
  Number of bridges: 0
ctg8_27 - Class II
  Cleavage pHMM score: -8.80
  RODEO score: 16
  Monoisotopic mass: 2646.4 Da
  Molecular weight: 2648.0 Da
  Number of bridges: 0

gnlProkkaJJPBDDGL_8 - Region 2 - LAP,thiopeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 51,373 - 83,303 nt. (total: 31,931 nt) Show pHMM detection rules used
LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or TIGR03602) and not cyanobactin_synth)
thiopeptide: ((YcaO or TIGR03604) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Thiopeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Thiopeptide predictions
Lists the possible core peptides for each biosynthetic enzyme. Predicted tail sequences are also shown, if present.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.
No core peptides found.
Thiopeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists its possible molecular weights and the scores for cleavage site prediction and RODEO. If relevant, other features, such as macrocycle and amidation, will also be listed.
No core peptides found.
gnlProkkaJJPBDDGL_11 - Region 1 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 80,431 - 96,046 nt. (total: 15,616 nt) Show pHMM detection rules used
Region on contig edge.
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJJPBDDGL_36 - Region 1 - lanthipeptide-class-ii
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 5,360 nt. (total: 5,360 nt) Show pHMM detection rules used
Region on contig edge.
lanthipeptide-class-ii: cds(LANC_like and DUF4135)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lanthipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Lanthipeptide predictions
Shows the possible core peptides for each biosynthetic enzyme.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.
Lanthipeptides - No core peptides found.
Lanthipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of lanthionine bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.
No core peptides found.