Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_047947205.1	Streptococcus thermophilus	STMM1	SAMN34598787	2022	Italy	-	0	0	19	28	33.84
2	GCA_047947225.1	Streptococcus thermophilus	STMM3	SAMN34598939	2022	Italy	-	354	0	28	28	39.60
3	GCA_047947215.1	Streptococcus thermophilus	STMM2	SAMN34598920	2022	Italy	-	407	0	19	28	33.84
4	GCA_903886745.1	Streptococcus thermophilus	-	SAMEA6957300	2009	Italy	-	750	1	25	28	37.55
5	GCA_903890635.1	Streptococcus thermophilus	-	SAMEA6957301	2009	Italy	-	750	1	25	28	37.55
6	GCA_047947235.1	Streptococcus thermophilus	STMM4	SAMN34598941	2022	Italy	-	751	0	23	28	36.24
7	GCA_019450055.1	Streptococcus thermophilus	Roque89	SAMN19836731	2020-11-09	Ireland	-	758	1	23	32	39.42
8	GCA_019450135.1	Streptococcus thermophilus	Douc24	SAMN19836733	2020-11-09	Ireland	-	760	5	24	33	41.11
9	GCA_002796705.1	Streptococcus thermophilus	St-2	SAMN08049010	2010	Spain:Asturias	-	761	1	25	32	40.62
10	GCA_047947255.1	Streptococcus thermophilus	STMM22	SAMN34598943	2022	Italy	-	761	0	24	27	36.12
11	GCA_047947265.1	Streptococcus thermophilus	STMM25	SAMN34598944	2022	Italy	-	761	0	18	27	32.45
12	GCA_002796635.1	Streptococcus thermophilus	St-9	SAMN08049013	2010	Spain:Asturias	-	762	1	23	31	38.61
13	GCA_903890695.1	Streptococcus thermophilus	-	SAMEA6957302	2009	Italy	-	762	1	20	28	34.42
14	GCA_000521265.1	Streptococcus thermophilus M17PTZA496	M17PTZA496	SAMN02437282	1996-02-15	Italy: Valle d'Aosta	-	765	1	30	29	41.74
15	GCA_004354505.1	Streptococcus thermophilus	ATCC 19258	SAMN08493372	2017	Denmark	-	765	0	29	34	44.69
16	GCA_015190465.1	Streptococcus thermophilus	TK-P3A	SAMN13106279	2019-02-26	China:Zhejiang province	-	765	0	28	28	39.60
17	GCA_027854415.1	Streptococcus thermophilus	4242	SAMN32632016	2020-07	Turkey	-	765	1	30	31	43.15
18	GCA_027944095.1	Streptococcus thermophilus	TSGB 4254	SAMN32339324	2020-07	Turkey	-	765	1	24	27	36.14
19	GCA_042649985.1	Streptococcus thermophilus	CCUG 21957	SAMN43282004	2021	-	-	765	0	29	34	44.69
20	GCA_900474985.1	Streptococcus thermophilus	NCTC12958	SAMEA3594354	1900/2007	-	-	765	0	29	30	41.73
21	GCA_020736685.1	Streptococcus thermophilus LMD-9	FDAARGOS_1574	SAMN22091671	-	USA: Silver Spring	-	766	0	29	30	41.73
22	GCA_903886595.1	Streptococcus thermophilus	-	SAMEA6957299	2009	Italy	-	772	0	20	27	33.60
23	GCA_019449965.1	Streptococcus thermophilus	Racle124	SAMN19136544	2020-11-09	Ireland	-	773	0	28	33	43.28
24	GCA_002796625.1	Streptococcus thermophilus	St-5	SAMN08049011	2010	Spain:Asturias	-	774	1	28	33	43.29
25	GCA_002796655.1	Streptococcus thermophilus	St-6	SAMN08049012	2010	Spain:Asturias	-	774	1	28	33	43.29
26	GCA_047947245.1	Streptococcus thermophilus	STMM11	SAMN34598942	2022	Italy	-	783	0	23	29	37.01
27	GCA_903886645.1	Streptococcus thermophilus	-	SAMEA6957295	2007	Italy	-	784	1	20	27	33.62
28	GCA_011801285.1	Streptococcus thermophilus	ST64987	SAMN12743474	2012-11	Netherlands	-	788	0	19	28	33.84
29	GCA_018966905.1	Streptococcus thermophilus	159	SAMN19670538	2004-09-16	Russia: Caucasus	-	790	0	27	33	42.64
30	GCA_019449815.1	Streptococcus thermophilus	Brie16	SAMN19116371	2020-11-09	Ireland	-	790	0	27	33	42.64
31	GCA_023893675.1	Streptococcus thermophilus	16t	SAMN29094259	1982	Georgia: Tbilisi	-	790	0	27	33	42.64
32	GCA_034044695.1	Streptococcus thermophilus	KF8	SAMN38411847	2022-09-10	Russia: Moscow	-	790	0	27	33	42.64
33	GCA_000572095.1	Streptococcus thermophilus TH1477	TH1477	SAMN02442661	2012-11-14	Italy: Veneto	-	793	0	23	29	37.01
34	GCA_019449835.1	Streptococcus thermophilus	Moz86	SAMN19116394	2020-11-09	Ireland	-	793	0	28	33	43.28
35	GCA_019449875.1	Streptococcus thermophilus	Rico66	SAMN19136588	2020-11-09	Ireland	-	793	0	28	33	43.28
36	GCA_019450065.1	Streptococcus thermophilus	FDL19	SAMN19836727	2020-11-09	Ireland	-	793	0	28	33	43.28
37	GCA_025127235.1	Streptococcus thermophilus	979	SAMN10365143	1981	Switzerland	-	793	0	27	35	44.20
38	GCA_025127255.1	Streptococcus thermophilus	978	SAMN10365142	1981	Switzerland	-	793	0	27	35	44.20
39	GCA_025129195.1	Streptococcus thermophilus	977	SAMN10365141	1981	Switzerland	-	793	0	27	35	44.20
40	GCA_025132835.1	Streptococcus thermophilus	974	SAMN10365139	1980	Switzerland	-	793	0	27	35	44.20
41	GCA_025132855.1	Streptococcus thermophilus	973	SAMN10365138	1980	Switzerland	-	793	0	27	35	44.20
42	GCA_041509385.1	Streptococcus thermophilus	S24750	SAMN18478718	2019	Switzerland	-	793	0	27	31	41.11
43	GCA_041514285.1	Streptococcus thermophilus	S24733	SAMN18478708	2019	Switzerland	-	793	0	27	31	41.11
44	GCA_041514295.1	Streptococcus thermophilus	S24732	SAMN18478707	2019	Switzerland	-	793	0	27	31	41.11
45	GCA_041893975.1	Streptococcus thermophilus	S24748	SAMN18490527	2019	Switzerland	-	793	0	27	31	41.11
46	GCA_042187295.1	Streptococcus thermophilus	S24731	SAMN18490524	2019	Switzerland	-	793	0	27	35	44.20
47	GCA_000521285.1	Streptococcus thermophilus TH1435	TH1435	SAMN02401100	2011-04-01	Italy: Friuli Venezia Giulia	-	794	0	28	29	40.31
48	GCA_020076005.1	Streptococcus thermophilus	DS03_14	SAMN15078662	2018-03-12	USA:MD	Homo sapiens	794	0	25	33	41.40
49	GCA_020076175.1	Streptococcus thermophilus	CF12_14	SAMN15078601	2018-03-12	USA:MD	Homo sapiens	794	0	25	32	40.61
50	GCA_025127245.1	Streptococcus thermophilus	980	SAMN10365144	1981	Switzerland	-	794	0	27	35	44.20
51	GCA_027557675.1	Streptococcus thermophilus	EG007	SAMN17736326	2018-03-21	South Korea: Seoul	-	794	0	28	27	38.90
52	GCA_039783405.1	Streptococcus thermophilus	ST19	SAMN16933243	1995	Ireland	-	794	0	19	29	34.67
53	GCA_009856565.1	Streptococcus thermophilus	EU01	SAMN13618337	2018-04-18	China: tianjin	Homo sapiens	795	0	25	28	37.54
54	GCA_025186385.1	Streptococcus thermophilus	CIRM-BIA 1864	SAMN10365668	1962	Italy	-	795	0	27	32	41.87
55	GCA_025187605.1	Streptococcus thermophilus	CIRM-BIA 1360	SAMN10365629	1962	Italy	-	795	0	27	32	41.87
56	GCA_025187615.1	Streptococcus thermophilus	CIRM-BIA 2103	SAMN10365628	1987	Italy	-	795	0	27	32	41.87
57	GCA_039783635.1	Streptococcus thermophilus	CNRZ1575	SAMN16933248	1995	Ireland	-	795	0	27	28	38.90
58	GCA_002914925.1	Streptococcus thermophilus	BT01	SAMN07187786	2017	Italy	-	796	0	35	32	47.42
59	GCA_019450035.1	Streptococcus thermophilus	Moz77	SAMN19136542	2020-11-09	Ireland	-	796	0	23	33	40.22
60	GCA_019450095.1	Streptococcus thermophilus	Moz76	SAMN19836723	2020-11-09	Ireland	-	796	0	35	33	48.10
61	GCA_020075965.1	Streptococcus thermophilus	DS61_14	SAMN15078830	2019-03-12	USA:MD	Homo sapiens	796	0	35	33	48.10
62	GCA_020076045.1	Streptococcus thermophilus	CF5_14	SAMN15078648	2018-03-12	USA:MD	Homo sapiens	796	0	35	32	47.42
63	GCA_020076065.1	Streptococcus thermophilus	CF8_14	SAMN15078656	2018-03-12	USA:MD	Homo sapiens	796	0	35	33	48.10
64	GCA_020076105.1	Streptococcus thermophilus	DS76_14	SAMN15078890	2019-03-12	USA:MD	Homo sapiens	796	0	35	32	47.42
65	GCA_020076115.1	Streptococcus thermophilus	CF4_14	SAMN15078639	2018-03-12	USA:MD	Homo sapiens	796	0	35	32	47.42
66	GCA_020076145.1	Streptococcus thermophilus	DS45_14	SAMN15078736	2019-03-12	USA:MD	Homo sapiens	796	0	35	33	48.10
67	GCA_020076365.1	Streptococcus thermophilus	DS51_14	SAMN15078775	2019-03-12	USA:MD	Homo sapiens	796	0	27	33	42.64
68	GCA_024665315.1	Streptococcus thermophilus	TH-4	SAMN29862205	-	-	Homo sapiens	796	0	35	28	44.82
69	GCA_025962735.1	Streptococcus thermophilus	UCCSt89	SAMN29795576	2017	Ireland	-	796	0	25	33	41.40
70	GCA_027944055.1	Streptococcus thermophilus	TSGB 4241	SAMN32339320	2020-07	Turkey	-	796	0	21	33	39.12
71	GCA_036867665.1	Streptococcus thermophilus	St 9.1	SAMN39095003	2021-04-01	Spain: Asturias	-	796	0	25	33	41.40
72	GCA_039784265.1	Streptococcus thermophilus	1A	SAMN16933227	1996	Ireland	-	796	0	27	29	39.62
73	GCA_000014485.1	Streptococcus thermophilus LMD-9	LMD-9	SAMN02598313	-	-	-	797	0	35	29	45.45
74	GCA_001867185.1	Streptococcus thermophilus	UC8547del3	SAMN05463221	2010	Italy: Piacenza	-	797	0	18	33	37.59
75	GCA_001867245.1	Streptococcus thermophilus	UC8547	SAMN05463208	2005	Italy: Como	-	797	0	18	33	37.59
76	GCA_019449795.1	Streptococcus thermophilus	Rico65	SAMN19116208	2020-11-09	Ireland	-	797	0	21	33	39.12
77	GCA_025187495.1	Streptococcus thermophilus	CIRM-BIA 1363	SAMN10365634	1993	France	-	797	0	20	33	38.59
78	GCA_036867635.1	Streptococcus thermophilus	St 8.1	SAMN39095002	2021-04-01	Spain: Asturias	-	797	0	23	32	39.41
79	GCA_039783255.1	Streptococcus thermophilus	MM1	SAMN16933240	2017	Ireland	-	797	0	22	28	35.61
80	GCA_039784885.1	Streptococcus thermophilus	ST128	SAMN16933244	1996	Ireland	-	797	0	26	29	38.95
81	GCA_900492165.1	Streptococcus thermophilus	N4L	SAMEA4729876	-	-	-	797	0	23	29	37.01
82	GCA_000521325.1	Streptococcus thermophilus MTH17CL396	MTH17CL396	SAMN02437281	1996-02-15	Italy: Valle d'Aosta	-	798	0	22	28	35.61
83	GCA_000971665.1	Streptococcus thermophilus	SMQ-301	SAMN02850632	1996-06	-	-	798	0	27	29	39.62
84	GCA_005864465.1	Streptococcus thermophilus	FAM 13496	SAMN11653956	1988	Switzerland	-	798	0	25	33	41.40
85	GCA_017360005.1	Streptococcus thermophilus	24739	SAMN15923548	1984	Switzerland	-	798	0	25	29	38.29
86	GCA_017360305.1	Streptococcus thermophilus	13496	SAMN15923539	1984	Switzerland	-	798	0	25	29	38.29
87	GCA_017367105.1	Streptococcus thermophilus	13497	SAMN15923540	1984	Switzerland	-	798	0	25	33	41.40
88	GCA_020075945.1	Streptococcus thermophilus	DS30_14	SAMN15078680	2019-03-12	USA:MD	Homo sapiens	798	0	35	33	48.10
89	GCA_026805425.1	Streptococcus thermophilus	ST30-8	SAMN30276017	-	-	-	798	0	23	33	40.22
90	GCA_027944035.1	Streptococcus thermophilus	TSGB 4242	SAMN32339321	2020-07	Turkey	-	798	0	22	32	38.83
91	GCA_029523265.1	Streptococcus thermophilus	MGA45-4	SAMN26185813	2009	China:Hohhot	-	798	0	26	33	42.01
92	GCA_036867595.1	Streptococcus thermophilus	St 21.1	SAMN39095005	2021-04-01	Spain: Asturias	-	798	0	25	33	41.40
93	GCA_036867615.1	Streptococcus thermophilus	St 18.1	SAMN39095004	2021-04-01	Spain: Asturias	-	798	0	23	33	40.22
94	GCA_039784555.1	Streptococcus thermophilus	4021	SAMN16933228	1995	Ireland	-	798	0	27	29	39.62
95	GCA_000253395.1	Streptococcus thermophilus JIM 8232	JIM 8232	SAMEA2272807	-	-	-	799	0	25	31	39.82
96	GCA_000572065.1	Streptococcus thermophilus TH982	TH982	SAMN02442657	2003-11-06	Italy: Campania	-	799	0	23	29	37.01
97	GCA_001008015.1	Streptococcus thermophilus	MN-BM-A02	SAMN03325854	2008	China: Dali region, Yunnan	-	799	0	25	29	38.29
98	GCA_001306395.1	Streptococcus thermophilus	C106	SAMN03801559	2010-07-29	Ireland: Cork Farmers Market	-	799	0	25	33	41.40
99	GCA_001855705.1	Streptococcus thermophilus	ND07	SAMN05357478	2005	China:Tianjun County, Qinhai Province	-	799	0	25	29	38.29
100	GCA_002843115.1	Streptococcus thermophilus	DGCC 7710	SAMN08130366	-	-	-	799	0	25	29	38.29