Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_047947235.1	Streptococcus thermophilus	STMM4	SAMN34598941	2022	Italy	-	0	0	23	28	36.24
2	GCA_047947255.1	Streptococcus thermophilus	STMM22	SAMN34598943	2022	Italy	-	254	0	24	27	36.12
3	GCA_047947265.1	Streptococcus thermophilus	STMM25	SAMN34598944	2022	Italy	-	255	0	18	27	32.45
4	GCA_903886645.1	Streptococcus thermophilus	-	SAMEA6957295	2007	Italy	-	422	1	20	27	33.62
5	GCA_903886595.1	Streptococcus thermophilus	-	SAMEA6957299	2009	Italy	-	423	0	20	27	33.60
6	GCA_903890695.1	Streptococcus thermophilus	-	SAMEA6957302	2009	Italy	-	442	1	20	28	34.42
7	GCA_903890635.1	Streptococcus thermophilus	-	SAMEA6957301	2009	Italy	-	443	1	25	28	37.55
8	GCA_903886745.1	Streptococcus thermophilus	-	SAMEA6957300	2009	Italy	-	444	1	25	28	37.55
9	GCA_903886505.1	Streptococcus thermophilus	-	SAMEA6957293	2007	Italy	-	671	0	22	27	34.83
10	GCA_047947215.1	Streptococcus thermophilus	STMM2	SAMN34598920	2022	Italy	-	739	0	19	28	33.84
11	GCA_047947205.1	Streptococcus thermophilus	STMM1	SAMN34598787	2022	Italy	-	751	0	19	28	33.84
12	GCA_047947225.1	Streptococcus thermophilus	STMM3	SAMN34598939	2022	Italy	-	753	0	28	28	39.60
13	GCA_015190465.1	Streptococcus thermophilus	TK-P3A	SAMN13106279	2019-02-26	China:Zhejiang province	-	819	0	28	28	39.60
14	GCA_019450055.1	Streptococcus thermophilus	Roque89	SAMN19836731	2020-11-09	Ireland	-	819	1	23	32	39.42
15	GCA_004354505.1	Streptococcus thermophilus	ATCC 19258	SAMN08493372	2017	Denmark	-	822	0	29	34	44.69
16	GCA_019450135.1	Streptococcus thermophilus	Douc24	SAMN19836733	2020-11-09	Ireland	-	822	5	24	33	41.11
17	GCA_020736685.1	Streptococcus thermophilus LMD-9	FDAARGOS_1574	SAMN22091671	-	USA: Silver Spring	-	822	0	29	30	41.73
18	GCA_042649985.1	Streptococcus thermophilus	CCUG 21957	SAMN43282004	2021	-	-	822	0	29	34	44.69
19	GCA_900474985.1	Streptococcus thermophilus	NCTC12958	SAMEA3594354	1900/2007	-	-	822	0	29	30	41.73
20	GCA_027944095.1	Streptococcus thermophilus	TSGB 4254	SAMN32339324	2020-07	Turkey	-	823	1	24	27	36.14
21	GCA_002796705.1	Streptococcus thermophilus	St-2	SAMN08049010	2010	Spain:Asturias	-	824	1	25	32	40.62
22	GCA_027854415.1	Streptococcus thermophilus	4242	SAMN32632016	2020-07	Turkey	-	824	1	30	31	43.15
23	GCA_000521265.1	Streptococcus thermophilus M17PTZA496	M17PTZA496	SAMN02437282	1996-02-15	Italy: Valle d'Aosta	-	825	1	30	29	41.74
24	GCA_002796625.1	Streptococcus thermophilus	St-5	SAMN08049011	2010	Spain:Asturias	-	825	1	28	33	43.29
25	GCA_002796655.1	Streptococcus thermophilus	St-6	SAMN08049012	2010	Spain:Asturias	-	825	1	28	33	43.29
26	GCA_019449965.1	Streptococcus thermophilus	Racle124	SAMN19136544	2020-11-09	Ireland	-	825	0	28	33	43.28
27	GCA_000572095.1	Streptococcus thermophilus TH1477	TH1477	SAMN02442661	2012-11-14	Italy: Veneto	-	826	0	23	29	37.01
28	GCA_002796635.1	Streptococcus thermophilus	St-9	SAMN08049013	2010	Spain:Asturias	-	827	1	23	31	38.61
29	GCA_039784265.1	Streptococcus thermophilus	1A	SAMN16933227	1996	Ireland	-	831	0	27	29	39.62
30	GCA_002796645.1	Streptococcus thermophilus	St-10	SAMN08049014	2010	Spain:Asturias	-	833	0	25	33	41.40
31	GCA_000521325.1	Streptococcus thermophilus MTH17CL396	MTH17CL396	SAMN02437281	1996-02-15	Italy: Valle d'Aosta	-	835	0	22	28	35.61
32	GCA_010500735.1	Streptococcus thermophilus	MV-FAST4	SAMN14001869	2019	Italy	-	838	0	22	33	39.66
33	GCA_019449735.1	Streptococcus thermophilus	Moz111	SAMN19116355	2020-11-09	Ireland	-	838	0	30	33	44.60
34	GCA_019450015.1	Streptococcus thermophilus	Moz74	SAMN19136541	2020-11-09	Ireland	-	838	0	22	33	39.66
35	GCA_047947245.1	Streptococcus thermophilus	STMM11	SAMN34598942	2022	Italy	-	838	0	23	29	37.01
36	GCA_019449995.1	Streptococcus thermophilus	Strac42	SAMN19136545	2020-11-09	Ireland	-	839	0	29	33	43.93
37	GCA_020404265.1	Streptococcus thermophilus	ST4	SAMN21924262	2020-08-09	USA: Oregon	-	839	0	29	33	43.93
38	GCA_020404275.1	Streptococcus thermophilus	ST10	SAMN21924263	2020-08-09	USA: Oregon	-	839	0	29	33	43.93
39	GCA_020404325.1	Streptococcus thermophilus	ST11	SAMN21924264	2020-08-06	USA: Oregon	-	839	0	25	33	41.40
40	GCA_019449935.1	Streptococcus thermophilus	Scam27	SAMN19136546	2020-11-09	Ireland	-	840	0	24	33	40.80
41	GCA_019450115.1	Streptococcus thermophilus	FDL17	SAMN19836728	2020-11-09	Ireland	-	840	0	24	33	40.80
42	GCA_036867595.1	Streptococcus thermophilus	St 21.1	SAMN39095005	2021-04-01	Spain: Asturias	-	840	0	25	33	41.40
43	GCA_036867665.1	Streptococcus thermophilus	St 9.1	SAMN39095003	2021-04-01	Spain: Asturias	-	840	0	25	33	41.40
44	GCA_000521285.1	Streptococcus thermophilus TH1435	TH1435	SAMN02401100	2011-04-01	Italy: Friuli Venezia Giulia	-	841	0	28	29	40.31
45	GCA_000572065.1	Streptococcus thermophilus TH982	TH982	SAMN02442657	2003-11-06	Italy: Campania	-	841	0	23	29	37.01
46	GCA_019449835.1	Streptococcus thermophilus	Moz86	SAMN19116394	2020-11-09	Ireland	-	841	0	28	33	43.28
47	GCA_019449875.1	Streptococcus thermophilus	Rico66	SAMN19136588	2020-11-09	Ireland	-	841	0	28	33	43.28
48	GCA_019450065.1	Streptococcus thermophilus	FDL19	SAMN19836727	2020-11-09	Ireland	-	841	0	28	33	43.28
49	GCA_020404245.1	Streptococcus thermophilus	ST13	SAMN21924265	2020-08-06	USA: Oregon	-	841	0	25	33	41.40
50	GCA_020404305.1	Streptococcus thermophilus	ST1	SAMN21924261	2020-08-06	USA: Oregon	-	841	0	25	33	41.40
51	GCA_025186385.1	Streptococcus thermophilus	CIRM-BIA 1864	SAMN10365668	1962	Italy	-	841	0	27	32	41.87
52	GCA_025187525.1	Streptococcus thermophilus	CIRM-BIA 1362	SAMN10365633	1993	France	-	841	0	25	33	41.40
53	GCA_025187605.1	Streptococcus thermophilus	CIRM-BIA 1360	SAMN10365629	1962	Italy	-	841	0	27	32	41.87
54	GCA_025187615.1	Streptococcus thermophilus	CIRM-BIA 2103	SAMN10365628	1987	Italy	-	841	0	27	32	41.87
55	GCA_036867615.1	Streptococcus thermophilus	St 18.1	SAMN39095004	2021-04-01	Spain: Asturias	-	841	0	23	33	40.22
56	GCA_036867635.1	Streptococcus thermophilus	St 8.1	SAMN39095002	2021-04-01	Spain: Asturias	-	841	0	23	32	39.41
57	GCA_039783635.1	Streptococcus thermophilus	CNRZ1575	SAMN16933248	1995	Ireland	-	841	0	27	28	38.90
58	GCA_000971665.1	Streptococcus thermophilus	SMQ-301	SAMN02850632	1996-06	-	-	842	0	27	29	39.62
59	GCA_002914925.1	Streptococcus thermophilus	BT01	SAMN07187786	2017	Italy	-	842	0	35	32	47.42
60	GCA_019450095.1	Streptococcus thermophilus	Moz76	SAMN19836723	2020-11-09	Ireland	-	842	0	35	33	48.10
61	GCA_020075965.1	Streptococcus thermophilus	DS61_14	SAMN15078830	2019-03-12	USA:MD	Homo sapiens	842	0	35	33	48.10
62	GCA_020076045.1	Streptococcus thermophilus	CF5_14	SAMN15078648	2018-03-12	USA:MD	Homo sapiens	842	0	35	32	47.42
63	GCA_020076065.1	Streptococcus thermophilus	CF8_14	SAMN15078656	2018-03-12	USA:MD	Homo sapiens	842	0	35	33	48.10
64	GCA_020076105.1	Streptococcus thermophilus	DS76_14	SAMN15078890	2019-03-12	USA:MD	Homo sapiens	842	0	35	32	47.42
65	GCA_020076115.1	Streptococcus thermophilus	CF4_14	SAMN15078639	2018-03-12	USA:MD	Homo sapiens	842	0	35	32	47.42
66	GCA_020076145.1	Streptococcus thermophilus	DS45_14	SAMN15078736	2019-03-12	USA:MD	Homo sapiens	842	0	35	33	48.10
67	GCA_020076365.1	Streptococcus thermophilus	DS51_14	SAMN15078775	2019-03-12	USA:MD	Homo sapiens	842	0	27	33	42.64
68	GCA_024665315.1	Streptococcus thermophilus	TH-4	SAMN29862205	-	-	Homo sapiens	842	0	35	28	44.82
69	GCA_027557675.1	Streptococcus thermophilus	EG007	SAMN17736326	2018-03-21	South Korea: Seoul	-	842	0	28	27	38.90
70	GCA_039784555.1	Streptococcus thermophilus	4021	SAMN16933228	1995	Ireland	-	842	0	27	29	39.62
71	GCA_000014485.1	Streptococcus thermophilus LMD-9	LMD-9	SAMN02598313	-	-	-	843	0	35	29	45.45
72	GCA_000698885.1	Streptococcus thermophilus ASCC 1275	ASCC 1275	SAMN02770279	-	Australia: Werribee, Victoria	-	843	0	25	29	38.29
73	GCA_001008015.1	Streptococcus thermophilus	MN-BM-A02	SAMN03325854	2008	China: Dali region, Yunnan	-	843	0	25	29	38.29
74	GCA_001306395.1	Streptococcus thermophilus	C106	SAMN03801559	2010-07-29	Ireland: Cork Farmers Market	-	843	0	25	33	41.40
75	GCA_001663795.1	Streptococcus thermophilus	KLDS SM	SAMN05226830	-	China: Inner Mongolia	-	843	0	25	29	38.29
76	GCA_001855705.1	Streptococcus thermophilus	ND07	SAMN05357478	2005	China:Tianjun County, Qinhai Province	-	843	0	25	29	38.29
77	GCA_002843115.1	Streptococcus thermophilus	DGCC 7710	SAMN08130366	-	-	-	843	0	25	29	38.29
78	GCA_003130445.1	Streptococcus thermophilus	05-34	SAMN09112352	2010	China: Tibet	-	843	0	25	33	41.40
79	GCA_013307185.1	Streptococcus thermophilus	CS5	SAMN08295147	2013	China	-	843	0	25	29	38.29
80	GCA_013307285.1	Streptococcus thermophilus	CS18	SAMN09635157	2014	China	-	843	0	25	29	38.29
81	GCA_018966905.1	Streptococcus thermophilus	159	SAMN19670538	2004-09-16	Russia: Caucasus	-	843	0	27	33	42.64
82	GCA_019449955.1	Streptococcus thermophilus	Nect13	SAMN19136543	2020-11-09	Ireland	-	843	0	25	33	41.40
83	GCA_020075925.1	Streptococcus thermophilus	DS14_14	SAMN06464115	2016-07-27	USA:MD	Homo sapiens	843	0	25	33	41.40
84	GCA_023006585.1	Streptococcus thermophilus	ST16	SAMN24807002	2019	Canada:Ottawa	-	843	0	25	32	40.61
85	GCA_029866985.1	Streptococcus thermophilus	DGCC7710	SAMN32348018	2015-10-09	USA:Georgia	-	843	0	25	29	38.29
86	GCA_030846755.1	Streptococcus thermophilus	CICC 20372	SAMN36973155	2006-03-31	China: Inner Mongolia	-	843	0	25	29	38.29
87	GCA_034044695.1	Streptococcus thermophilus	KF8	SAMN38411847	2022-09-10	Russia: Moscow	-	843	0	27	33	42.64
88	GCA_039782795.1	Streptococcus thermophilus	90728	SAMN16933233	1995	Ireland	-	843	0	23	30	37.80
89	GCA_039783285.1	Streptococcus thermophilus	MM20	SAMN16933241	2017	Ireland	-	843	1	24	29	37.66
90	GCA_045159845.1	Streptococcus thermophilus	4134	SAMN16933232	1996	Ireland	-	843	0	25	29	38.29
91	GCA_011801285.1	Streptococcus thermophilus	ST64987	SAMN12743474	2012-11	Netherlands	-	844	0	19	28	33.84
92	GCA_019449815.1	Streptococcus thermophilus	Brie16	SAMN19116371	2020-11-09	Ireland	-	844	0	27	33	42.64
93	GCA_019450035.1	Streptococcus thermophilus	Moz77	SAMN19136542	2020-11-09	Ireland	-	844	0	23	33	40.22
94	GCA_020075945.1	Streptococcus thermophilus	DS30_14	SAMN15078680	2019-03-12	USA:MD	Homo sapiens	844	0	35	33	48.10
95	GCA_023207975.1	Streptococcus thermophilus	CS6	SAMN14524728	2013-10-10	China	-	844	0	25	29	38.29
96	GCA_023893675.1	Streptococcus thermophilus	16t	SAMN29094259	1982	Georgia: Tbilisi	-	844	0	27	33	42.64
97	GCA_024334065.1	Streptococcus thermophilus	CH8	SAMN07809268	2005-02-07	Denmark	-	844	0	26	28	38.21
98	GCA_025187015.1	Streptococcus thermophilus	CIRM-BIA 2101	SAMN10365652	1975	Germany	-	844	0	21	32	38.28
99	GCA_025187195.1	Streptococcus thermophilus	CIRM-BIA 1117	SAMN10365648	1973	France	-	844	0	21	32	38.28
100	GCA_025187235.1	Streptococcus thermophilus	CIRM-BIA 67	SAMN10365647	1971	France	-	844	0	21	32	38.28