GCA_047947265.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGDMGHCMF_1 (original name was: gnl|Prokka|GDMGHCMF_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	lanthipeptide-class-v	161,955	203,819
Region 2	NRPS-like	340,670	383,789
Region 3	lanthipeptide-class-ii	638,415	660,541	thermophilin 1277	RiPP:Lanthipeptide	80%
Region 4	RiPP-like	885,777	903,544	ubericin K	Other	12%
Region 5	RaS-RiPP	1,293,151	1,315,575	streptide	RiPP	100%
Region 6	RiPP-like	1,567,693	1,596,104

gnlProkkaGDMGHCMF_1 - Region 1 - lanthipeptide-class-v

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Location: 161,955 - 203,819 nt. (total: 41,865 nt) Show pHMM detection rules used

lanthipeptide-class-v: (APH and HopA1)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaGDMGHCMF_1 - Region 2 - NRPS-like

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Location: 340,670 - 383,789 nt. (total: 43,120 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 2, location 340669 - 383789:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg1_373

PKS_AT (7..281): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 30.6
Methoxymalonyl-CoA: 25.5
Methylmalonyl-CoA: 17.4
inactive: 13.4
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ctg1_374

AMP-binding (31..257): X

nrpys: (unknown)

SVM prediction details:

NOTE: uncertain match

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Polar, uncharged (aliphatic with -SH) (Cys)
Small clusters prediction:: Polar, uncharged (aliphatic with -SH) (Cys)
Single AA prediction:: Polar, uncharged (aliphatic with -SH) (Cys)

Stachelhaus prediction details:

Stachelhaus sequence:: DLFN-----K
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaGDMGHCMF_1 - Region 3 - lanthipeptide-class-ii

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Location: 638,415 - 660,541 nt. (total: 22,127 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

Lanthipeptide predictions

Lanthipeptide(s) for ctg1_662

ctg1_660

Leader:

MMNATENQIFVETVSDQELEMLIGG

Core:

ADRGWIKTLTKDCPNVISSICAGTIITACKNCA

Core with dehydrations:

ADRGWIKDhbLDhbKDCysPNVIDhaDhaICysAGDhbIIDhbACysKNCysA

MIBiG 3.1 matches for ctg1_660

27.3% BGC0002110 (QKV49893.1): Lanthipeptide: birimositide

2

DRGWIKTLTKDC-PN

15

+ GW TLTK+C PN

15

NGGWC-TLTKECQPN

28

antiSMASH-DB 4.0 matches for ctg1_660

71.4% NZ_FMXP01000004.1: Lanthipeptides: BLQ04_RS01515_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

ADRGWIKTLTKDCPNVISSICAGTIITACK

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

54.5% NZ_AQQB01000068.1and 6 others:

NZ_BCEY01000024.1 Lanthipeptides: GOZ53_RS05100_lanthipeptideNZ_BCEZ01000067.1 Lanthipeptides: GOZ55_RS11230_lanthipeptideNZ_BCFC01000053.1 Lanthipeptides: GOZ35_RS07920_lanthipeptideNZ_BCFG01000017.1 Lanthipeptides: GOZ50_RS03220_lanthipeptideNZ_BCFI01000009.1 Lanthipeptides: GOZ54_RS02495_lanthipeptideNZ_CP019557.1 Lanthipeptides: BZG42_RS05725_lanthipeptide

Lanthipeptides: K738_RS01000000110290_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGT-IITACKNC

32

A G +KTLTKDCP +S+IC I+ CKNC

1

AGSGLVKTLTKDCPGFLSNICVNIGFISGCKNC

33

51.5% NC_017621.1and 16 others:

NZ_CP039462.1 Lanthipeptides: E8M06_RS05390_lanthipeptideNZ_JABTZM010000032.1 Lanthipeptides: HRQ47_RS09675_lanthipeptideNZ_JAEVFQ010000010.1 Lanthipeptides: JNO64_RS06375_lanthipeptideNZ_JAFFHD010000003.1 Lanthipeptides: JN532_RS02075_lanthipeptideNZ_JAGFVG010000007.1 Lanthipeptides: J5581_RS04225_lanthipeptideNZ_JAIJZO010000001.1 Lanthipeptides: K5Q34_RS00965_lanthipeptideNZ_JAIMDS010000024.1 Lanthipeptides: K6V32_RS10650_lanthipeptideNZ_JAJUWV010000001.1 Lanthipeptides: LZF89_RS05505_lanthipeptideNZ_JAMDIS010000017.1 Lanthipeptides: M5P45_RS08180_lanthipeptideNZ_JAMYIU010000001.1 Lanthipeptides: NKE44_RS01780_lanthipeptideNZ_JAMYIX010000001.1 Lanthipeptides: NKE54_RS02675_lanthipeptideNZ_JAMYIY010000001.1 Lanthipeptides: NKE64_RS02785_lanthipeptideNZ_JAMYJP010000014.1 Lanthipeptides: NKE68_RS07350_lanthipeptideNZ_LR738722.1 Lanthipeptides: STREPSUIS_RS03955_lanthipeptideNZ_VZMP01000023.1 Lanthipeptides: F6P50_RS09295_lanthipeptideNZ_VZNS01000007.1 Lanthipeptides: F6P79_RS05700_lanthipeptide

Lanthipeptides: SSUD12_RS06540_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGT-IITACKNC

32

A G++KTLTKDCP +S++C I+ CKNC

1

AGSGFVKTLTKDCPGFLSNVCVNIGFISGCKNC

33

with 37 more sequence matches

48.5% NZ_CP058255.1: Lanthipeptides: HW369_RS18920_lanthipeptide

6

IKTLTKDCPNVISSICAG-TIITACKNC

32

+ T+TKDCPN +SS+C I+ACKNC

2

VPTITKDCPNTVSSVCVTFPFISACKNC

29

47.1% NZ_FNYB01000007.1and 1 other:

NZ_KB976303.1 Lanthipeptides: IGY_RS28100_lanthipeptide

Lanthipeptides: BMZ34_RS15340_lanthipeptide

4

GWIKTLTKDCPNVISSICAG-TIITACKNC

32

G+I+TLTKDCP V IC I CK C

4

GYIETLTKDCPRVTPQICVPINGIWTCKRC

33

47.1% NZ_JH792312.1and 1 other:

NZ_QNRN01000010.1 Lanthipeptides: DET63_RS17570_lanthipeptide

Lanthipeptides: IIG_RS24665_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITA--CKNC

32

A GW++TLTKDCP + C TI+ CK C

1

AGPGWVETLTKDCPWNVPVACV-TIMGQRICKKC

33

47.1% NZ_KB976165.1: Lanthipeptides: ICC_RS24850_lanthipeptide

4

GWIKTLTKDCPNVISSIC---AGTIITACKNC

32

GW++TLTKDCP C AG I CK C

4

GWVETLTKDCPGYKPYACITIAGQTI--CKKC

33

44.1% NZ_CP036100.1and 1 other:

NZ_CP072062.1 Lanthipeptides: J5V93_RS29280_lanthipeptide

Lanthipeptides: EXW47_RS29185_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITA--CKNC

32

A GW++T+TKDCP + C TI+ CK C

1

AGPGWVETVTKDCPWNVPVACV-TIMGQRICKKC

33

41.2% NZ_CP040409.1and 4 others:

NZ_CP040414.1 Lanthipeptides: FE331_RS04020_lanthipeptideNZ_CP040415.1 Lanthipeptides: allorf_0721024_0721203_lanthipeptideNZ_CP040417.1 Lanthipeptides: FE328_RS00745_lanthipeptideNZ_CP040424.1 Lanthipeptides: FE321_RS03445_lanthipeptide

Lanthipeptides: FE336_RS03450_lanthipeptide

4

GWIKTLTKDCPNVISSICAG-TIITACKNC

32

G +KTLTKDCP +S +C +++ CK C

4

GLLKTLTKDCPGTVSDVCVNLAVVSTCKKC

33

36.4% NC_009480.1and 10 others:

NZ_CP033724.1 Lanthipeptides: EFE39_RS10220_lanthipeptideNZ_CP047051.1 Lanthipeptides: GRD74_RS10365_lanthipeptideNZ_CP047054.1 Lanthipeptides: GRD61_RS10460_lanthipeptideNZ_CP053860.1 Lanthipeptides: DQP62_RS10825_lanthipeptideNZ_CP076352.1 Lanthipeptides: KN218_RS09900_lanthipeptideNZ_CP085137.1 Lanthipeptides: LHJ48_RS10290_lanthipeptideNZ_CP085140.1 Lanthipeptides: LHJ47_RS10305_lanthipeptideNZ_CP095274.1 Lanthipeptides: MU580_RS10460_lanthipeptideNZ_PSTW01000024.1 Lanthipeptides: C5C03_RS09675_lanthipeptideNZ_SISU01000002.1 Lanthipeptides: EOG37_RS09890_lanthipeptide

Lanthipeptides: CMM_RS10575_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

+ GW+ TLT +C GTII AC+

1

SSSGWLCTLTIEC---------GTIICACR

21

36.4% NZ_AUBN01000022.1: Lanthipeptides: G448_RS16025_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

A GW TLT +C GT I AC+

1

ASSGWFCTLTIEC---------GTFICACR

21

36.4% NZ_CP028130.1: Lanthipeptides: C7V51_RS14690_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

GW+ TLT +C GTII AC+

1

GSSGWMCTLTIEC---------GTIICACR

21

36.4% NZ_CP061274.1and 1 other:

NZ_JADKRR010000001.1 Lanthipeptides: ITJ40_RS10085_lanthipeptide

Lanthipeptides: H9X71_RS09850_lanthipeptide

1

ADRGWIKTLTKDCPNVISSICAGTIITACK

30

A GW+ TLT +C GT I AC+

1

ASSGWLCTLTIEC---------GTFICACR

21

33.3% NZ_BMMB01000007.1and 1 other:

NZ_BMMB01000007.1 Lanthipeptides: IEX62_RS15675_lanthipeptide

Lanthipeptides: IEX62_RS15680_lanthipeptide

4

GWIKTLTKDCPNVI

17

GWI TLT DCPN I

6

GWITTLTDDCPNSI

19

33.3% NZ_CP018188.1and 5 others:

NZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09335_lanthipeptideNZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09335_lanthipeptideNZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06620_lanthipeptideNZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06620_lanthipeptideNZ_VDNV01000006.1 Lanthipeptides: FSV44_RS08680_lanthipeptide

Lanthipeptides: BSR19_RS10820_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GWI T+T DCPN I C

5

GWIATITDDCPNSIFVCC

22

33.3% NZ_CP040409.1and 4 others:

NZ_CP040414.1 Lanthipeptides: FE331_RS04030_lanthipeptideNZ_CP040415.1 Lanthipeptides: FE330_RS03440_lanthipeptideNZ_CP040417.1 Lanthipeptides: FE328_RS00755_lanthipeptideNZ_CP040424.1 Lanthipeptides: FE321_RS03455_lanthipeptide

Lanthipeptides: FE336_RS03460_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

G ++TLTKDCPNV+ +C

4

GLVRTLTKDCPNVVPKVC

21

30.3% NZ_CP036455.1: Lanthipeptides: EKD16_RS25235_lanthipeptide

2

DRGWIKTLTKDCPNVISSICAGTIITACK

30

GW+ TLT +C GT++ AC+

1

SSGWVCTLTIEC---------GTLVCACQ

20

30.3% NZ_JAGPXN010000019.1: Lanthipeptides: KBX06_RS22045_lanthipeptide

4

GWIKTLTKDCPNVISSICAGTIITACK

30

GW+ TLT +C GT++ AC+

3

GWVCTLTIEC---------GTVVCACR

20

30.3% NZ_MJEH01000022.1and 2 others:

NZ_MJEH01000022.1 Lanthipeptides: BFG57_RS18360_lanthipeptideNZ_MJEH01000022.1 Lanthipeptides: BFG57_RS09480_lanthipeptide

Lanthipeptides: BFG57_RS18365_lanthipeptide

4

GWIKTLTKDCPNVI

17

GWI T+T DCPN I

3

GWISTITDDCPNSI

16

30.3% NZ_NIHT01000008.1and 1 other:

NZ_NIHT01000008.1 Lanthipeptides: CDL23_RS06740_lanthipeptide

Lanthipeptides: CDL23_RS06745_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW+ T+T DCPN I C

5

GWLPTITDDCPNSIFVCC

22

30.3% NZ_PKIA01000004.1: Lanthipeptides: CYK22_RS03780_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GWI T+T DCPN + C

5

GWIATITDDCPNSVFVCC

22

29.4% NZ_CM000731.1and 11 others:

NZ_CP036053.1 Lanthipeptides: EXW64_RS27135_lanthipeptideNZ_CP043834.1 Lanthipeptides: F0362_RS30375_lanthipeptideNZ_JAOPRA010000024.1 Lanthipeptides: OCE16_RS27090_lanthipeptideNZ_KB976276.1 Lanthipeptides: IIC_RS09105_lanthipeptideNZ_KB976667.1 Lanthipeptides: IG5_RS06165_lanthipeptideNZ_LDKD02000003.1 Lanthipeptides: ABH17_RS27060_lanthipeptideNZ_NUAO01000019.1 Lanthipeptides: CN544_RS19345_lanthipeptideNZ_NVFH01000027.1 Lanthipeptides: COL40_RS24675_lanthipeptideNZ_NVHY01000021.1 Lanthipeptides: COM05_RS26660_lanthipeptideNZ_NVOB01000050.1 Lanthipeptides: CON62_RS29235_lanthipeptideNZ_NVOV01000033.1 Lanthipeptides: CON78_RS26470_lanthipeptide

Lanthipeptides: BCERE0020_RS28875_lanthipeptide

1

ADRGWIKTLTKDCP

14

A GW++TLTKDCP

1

AGPGWVETLTKDCP

14

29.4% NZ_CM000758.1and 1 other:

NZ_MOOT01000057.1 Lanthipeptides: BK765_RS20265_lanthipeptide

Lanthipeptides: BTHUR0013_RS15850_lanthipeptide

4

GWIKTLTKDCP

14

GWI TLTKDCP

4

GWIATLTKDCP

14

27.3% NC_004070.1and 32 others:

NC_008024.1 Lanthipeptides: MGAS10750_RS08460_lanthipeptideNZ_CAAHHZ010000002.1 Lanthipeptides: E9518_RS02835_lanthipeptideNZ_CAAHIH010000002.1 Lanthipeptides: E9602_RS03585_lanthipeptideNZ_CAAHIO010000002.1 Lanthipeptides: E9584_RS04360_lanthipeptideNZ_CAAHJE010000002.1 Lanthipeptides: E9605_RS03435_lanthipeptideNZ_CAAHJS010000002.1 Lanthipeptides: E9628_RS02300_lanthipeptideNZ_CAAHKC010000012.1 Lanthipeptides: E9636_RS08085_lanthipeptideNZ_CAAHMR010000003.1 Lanthipeptides: E9727_RS05510_lanthipeptideNZ_CAAHQE010000003.1 Lanthipeptides: E9931_RS04945_lanthipeptideNZ_CAAHQG010000004.1 Lanthipeptides: E9903_RS05690_lanthipeptideNZ_CAAIFD010000008.1 Lanthipeptides: FAG63_RS07845_lanthipeptideNZ_CAAIJM010000014.1 Lanthipeptides: FAI23_RS09465_lanthipeptideNZ_CAAJDK010000010.1 Lanthipeptides: FAO79_RS08000_lanthipeptideNZ_CAAJFI010000003.1 Lanthipeptides: FAP60_RS03740_lanthipeptideNZ_CAJHJN010000010.1 Lanthipeptides: JMZ68_RS08975_lanthipeptideNZ_CP008926.1 Lanthipeptides: DP15_RS03855_lanthipeptideNZ_CP035434.1 Lanthipeptides: ETT65_RS08240_lanthipeptideNZ_CP035435.1 Lanthipeptides: ETT64_RS07905_lanthipeptideNZ_CP035447.1 Lanthipeptides: ETT52_RS07920_lanthipeptideNZ_CP035449.1 Lanthipeptides: ETT50_RS08255_lanthipeptideNZ_CP035453.1 Lanthipeptides: ETT46_RS08220_lanthipeptideNZ_CP060646.1 Lanthipeptides: H7789_RS07920_lanthipeptideNZ_CP065054.1 Lanthipeptides: I2432_RS09105_lanthipeptideNZ_CP066093.1 Lanthipeptides: I6I02_RS06995_lanthipeptideNZ_JACLQK010000029.1 Lanthipeptides: H7U04_RS10750_lanthipeptideNZ_JADPEB010000003.1 Lanthipeptides: I4U26_RS02855_lanthipeptideNZ_KV832031.1 Lanthipeptides: HMPREF2637_RS05170_lanthipeptideNZ_LRGW01000003.1 Lanthipeptides: AWU01_RS03260_lanthipeptideNZ_LS483298.1 Lanthipeptides: DQM39_RS08650_lanthipeptideNZ_LS483407.1 Lanthipeptides: DQM86_RS08100_lanthipeptideNZ_LS483425.1 Lanthipeptides: DQN36_RS07865_lanthipeptideNZ_LS483430.1 Lanthipeptides: DQN28_RS07600_lanthipeptide

Lanthipeptides: SPYM3_RS08605_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW T+T DCPN + C

5

GWFATITDDCPNSVFVCC

22

27.3% NZ_CP036073.1and 11 others:

NZ_CP036073.1 Lanthipeptides: EXW45_RS04930_lanthipeptideNZ_CP036073.1 Lanthipeptides: EXW45_RS04925_lanthipeptideNZ_CP036073.1 Lanthipeptides: EXW45_RS04920_lanthipeptideNZ_CP036073.1 Lanthipeptides: EXW45_RS04915_lanthipeptideNZ_CP036073.1 Lanthipeptides: EXW45_RS04910_lanthipeptideNZ_NUEG01000031.1 Lanthipeptides: CN905_RS18915_lanthipeptideNZ_NUEG01000031.1 Lanthipeptides: CN905_RS18910_lanthipeptideNZ_PVRT01000001.1 Lanthipeptides: C6359_RS05275_lanthipeptideNZ_PVRT01000001.1 Lanthipeptides: C6359_RS05270_lanthipeptideNZ_PVRT01000001.1 Lanthipeptides: C6359_RS05265_lanthipeptideNZ_PVRT01000001.1 Lanthipeptides: C6359_RS05260_lanthipeptide

Lanthipeptides: EXW45_RS04935_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW+ T+T DCPN + C

4

GWLCTVTDDCPNSVFVCC

21

27.3% NZ_CP048273.1and 3 others:

NZ_CP048273.1 Lanthipeptides: M654_RS18555_lanthipeptideNZ_LT745776.1 Lanthipeptides: B2C81_RS11280_lanthipeptideNZ_LT745776.1 Lanthipeptides: B2C81_RS11275_lanthipeptide

Lanthipeptides: M654_RS18560_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW T+T DCPN + C

4

GWACTITDDCPNSVFVCC

21

27.3% NZ_CP048890.1and 3 others:

NZ_CP071478.1 Lanthipeptides: J0P05_RS32905_lanthipeptideNZ_LUCO01000008.1 Lanthipeptides: BMBG_RS24280_lanthipeptideNZ_NVLN01000014.1 Lanthipeptides: CON11_RS24965_lanthipeptide

Lanthipeptides: BMG_RS30865_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW T+T DCPN + C

4

GWSCTITDDCPNSVFVCC

21

27.3% NZ_JANHJQ010000013.1: Lanthipeptides: NON16_RS14160_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW T+T DCPN + C

4

GWSCTVTDDCPNSVFVCC

21

26.5% NZ_CM000748.1and 1 other:

NZ_JAIPUK010000011.1 Lanthipeptides: K9P71_RS26815_lanthipeptide

Lanthipeptides: BTHUR0003_RS30910_lanthipeptide

4

GWIKTLTKDCP

14

GW++TLTKDCP

4

GWVETLTKDCP

14

24.2% NZ_MOWR01000001.1: Lanthipeptides: BMI76_RS01705_lanthipeptide

4

GWIKTLTKDCPNVISSIC

21

GW T+T +CPN + C

4

GWSFTITDECPNSVFVCC

21

21.2% NZ_AULU01000012.1: Lanthipeptides: H580_RS25790_lanthipeptide

4

GWIKTLTKDCPN

15

GW+ T T DCP

6

GWVCTYTLDCPG

17

21.2% NZ_CP015515.1and 1 other:

NZ_PSUO01000011.1 Lanthipeptides: C5C18_RS08595_lanthipeptide

Lanthipeptides: A6122_RS12855_lanthipeptide

1

ADRGWIKTLTKDCPNVI

17

GW+ TLT +C V+

1

GSSGWMCTLTIECGTVV

17

21.2% NZ_JAJAGO010000028.1and 1 other:

NZ_JAJAGO010000028.1 Lanthipeptides: LHJ74_RS33590_lanthipeptide

Lanthipeptides: LHJ74_RS33590_lanthipeptide

1

ADRGWIKTLTKDCP

14

+ GW TLTK+C

13

GNDGWWCTLTKECQ

26

21.2% NZ_KB895893.1and 1 other:

NZ_KB900614.1 Lanthipeptides: SALPAC6_RS0114155_lanthipeptide

Lanthipeptides: C569_RS0129325_lanthipeptide

2

DRGWIKTLTKDCPNVI

17

GW+ TLT +C V+

1

SSGWVCTLTIECGTVV

16

18.2% NZ_JAGFVL010000062.1: Lanthipeptides: J5J03_RS19425_lanthipeptide

4

GWIKTLTKDC

13

GWI + T DC

5

GWIPSFTGDC

14

18.2% NZ_JAODUN010000003.1: Lanthipeptides: BXY51_RS10560_lanthipeptide

2

DRGWIKTLTKDCPNVI

17

GW+ TLT +C ++

1

SSGWVCTLTIECGTLV

16

18.2% NZ_LR134483.1and 1 other:

NZ_LR134483.1 Lanthipeptides: EL241_RS01725_lanthipeptide

Lanthipeptides: EL241_RS01725_lanthipeptide

1

ADRGWIKTLTKDCPNV

16

++G++ TLTK+C +

11

GNKGYVCTLTKECQKL

26

17.1% NC_015957.1: Lanthipeptides: STRVI_RS53125_lanthipeptide

4

GWIKTLTKDC

13

GW+ TLT +C

24

GWVCTLTTEC

33

16.7% NZ_CP009288.1and 3 others:

NZ_CP009288.1 Lanthipeptides: PDUR_RS25150_lanthipeptideNZ_CP076607.1 Lanthipeptides: KP014_RS01580_lanthipeptideNZ_CP076607.1 Lanthipeptides: KP014_RS01580_lanthipeptide

Lanthipeptides: PDUR_RS25150_lanthipeptide

1

ADRGWIKTLTKDC

13

+ GW+ T TK+C

19

GNNGWVCTATKEC

31

15.0% NZ_CM001792.1and 1 other:

NZ_CM001792.1 Lanthipeptides: C794_RS17980_lanthipeptide

Lanthipeptides: C794_RS17980_lanthipeptide

1

ADRGWIKTLTKDC

13

++GW T+TK+C

21

GNQGWFCTITKEC

33

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

ctg1_660 - Class II

Cleavage pHMM score: 3.20

RODEO score: 0

Monoisotopic mass: 3357.7 Da

Molecular weight: 3359.9 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 3378.0 Da N = 1; 3396.0 Da N = 2

gnlProkkaGDMGHCMF_1 - Region 4 - RiPP-like

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Location: 885,777 - 903,544 nt. (total: 17,768 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaGDMGHCMF_1 - Region 5 - RaS-RiPP

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Location: 1,293,151 - 1,315,575 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
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Similar known gene clusters from MIBiG 3.1

gnlProkkaGDMGHCMF_1 - Region 6 - RiPP-like

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Location: 1,567,693 - 1,596,104 nt. (total: 28,412 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.