Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_047947265.1	Streptococcus thermophilus	STMM25	SAMN34598944	2022	Italy	-	0	0	18	27	32.45
2	GCA_047947255.1	Streptococcus thermophilus	STMM22	SAMN34598943	2022	Italy	-	15	0	24	27	36.12
3	GCA_047947235.1	Streptococcus thermophilus	STMM4	SAMN34598941	2022	Italy	-	255	0	23	28	36.24
4	GCA_903890635.1	Streptococcus thermophilus	-	SAMEA6957301	2009	Italy	-	438	1	25	28	37.55
5	GCA_903886595.1	Streptococcus thermophilus	-	SAMEA6957299	2009	Italy	-	439	0	20	27	33.60
6	GCA_903886645.1	Streptococcus thermophilus	-	SAMEA6957295	2007	Italy	-	440	1	20	27	33.62
7	GCA_903886745.1	Streptococcus thermophilus	-	SAMEA6957300	2009	Italy	-	440	1	25	28	37.55
8	GCA_903890695.1	Streptococcus thermophilus	-	SAMEA6957302	2009	Italy	-	460	1	20	28	34.42
9	GCA_903886505.1	Streptococcus thermophilus	-	SAMEA6957293	2007	Italy	-	663	0	22	27	34.83
10	GCA_047947215.1	Streptococcus thermophilus	STMM2	SAMN34598920	2022	Italy	-	759	0	19	28	33.84
11	GCA_047947205.1	Streptococcus thermophilus	STMM1	SAMN34598787	2022	Italy	-	761	0	19	28	33.84
12	GCA_047947225.1	Streptococcus thermophilus	STMM3	SAMN34598939	2022	Italy	-	769	0	28	28	39.60
13	GCA_015190465.1	Streptococcus thermophilus	TK-P3A	SAMN13106279	2019-02-26	China:Zhejiang province	-	823	0	28	28	39.60
14	GCA_027944095.1	Streptococcus thermophilus	TSGB 4254	SAMN32339324	2020-07	Turkey	-	823	1	24	27	36.14
15	GCA_004354505.1	Streptococcus thermophilus	ATCC 19258	SAMN08493372	2017	Denmark	-	824	0	29	34	44.69
16	GCA_042649985.1	Streptococcus thermophilus	CCUG 21957	SAMN43282004	2021	-	-	824	0	29	34	44.69
17	GCA_900474985.1	Streptococcus thermophilus	NCTC12958	SAMEA3594354	1900/2007	-	-	824	0	29	30	41.73
18	GCA_020736685.1	Streptococcus thermophilus LMD-9	FDAARGOS_1574	SAMN22091671	-	USA: Silver Spring	-	825	0	29	30	41.73
19	GCA_027854415.1	Streptococcus thermophilus	4242	SAMN32632016	2020-07	Turkey	-	825	1	30	31	43.15
20	GCA_019450055.1	Streptococcus thermophilus	Roque89	SAMN19836731	2020-11-09	Ireland	-	826	1	23	32	39.42
21	GCA_002796705.1	Streptococcus thermophilus	St-2	SAMN08049010	2010	Spain:Asturias	-	827	1	25	32	40.62
22	GCA_019450135.1	Streptococcus thermophilus	Douc24	SAMN19836733	2020-11-09	Ireland	-	829	5	24	33	41.11
23	GCA_000572095.1	Streptococcus thermophilus TH1477	TH1477	SAMN02442661	2012-11-14	Italy: Veneto	-	830	0	23	29	37.01
24	GCA_002796625.1	Streptococcus thermophilus	St-5	SAMN08049011	2010	Spain:Asturias	-	830	1	28	33	43.29
25	GCA_002796655.1	Streptococcus thermophilus	St-6	SAMN08049012	2010	Spain:Asturias	-	830	1	28	33	43.29
26	GCA_019449965.1	Streptococcus thermophilus	Racle124	SAMN19136544	2020-11-09	Ireland	-	830	0	28	33	43.28
27	GCA_000521265.1	Streptococcus thermophilus M17PTZA496	M17PTZA496	SAMN02437282	1996-02-15	Italy: Valle d'Aosta	-	831	1	30	29	41.74
28	GCA_002796645.1	Streptococcus thermophilus	St-10	SAMN08049014	2010	Spain:Asturias	-	831	0	25	33	41.40
29	GCA_002796635.1	Streptococcus thermophilus	St-9	SAMN08049013	2010	Spain:Asturias	-	832	1	23	31	38.61
30	GCA_039784265.1	Streptococcus thermophilus	1A	SAMN16933227	1996	Ireland	-	837	0	27	29	39.62
31	GCA_020404325.1	Streptococcus thermophilus	ST11	SAMN21924264	2020-08-06	USA: Oregon	-	839	0	25	33	41.40
32	GCA_000521325.1	Streptococcus thermophilus MTH17CL396	MTH17CL396	SAMN02437281	1996-02-15	Italy: Valle d'Aosta	-	840	0	22	28	35.61
33	GCA_020404245.1	Streptococcus thermophilus	ST13	SAMN21924265	2020-08-06	USA: Oregon	-	840	0	25	33	41.40
34	GCA_020404305.1	Streptococcus thermophilus	ST1	SAMN21924261	2020-08-06	USA: Oregon	-	840	0	25	33	41.40
35	GCA_019449735.1	Streptococcus thermophilus	Moz111	SAMN19116355	2020-11-09	Ireland	-	841	0	30	33	44.60
36	GCA_019449935.1	Streptococcus thermophilus	Scam27	SAMN19136546	2020-11-09	Ireland	-	841	0	24	33	40.80
37	GCA_019450115.1	Streptococcus thermophilus	FDL17	SAMN19836728	2020-11-09	Ireland	-	841	0	24	33	40.80
38	GCA_019449995.1	Streptococcus thermophilus	Strac42	SAMN19136545	2020-11-09	Ireland	-	843	0	29	33	43.93
39	GCA_020404265.1	Streptococcus thermophilus	ST4	SAMN21924262	2020-08-09	USA: Oregon	-	843	0	29	33	43.93
40	GCA_020404275.1	Streptococcus thermophilus	ST10	SAMN21924263	2020-08-09	USA: Oregon	-	843	0	29	33	43.93
41	GCA_036867595.1	Streptococcus thermophilus	St 21.1	SAMN39095005	2021-04-01	Spain: Asturias	-	843	0	25	33	41.40
42	GCA_036867665.1	Streptococcus thermophilus	St 9.1	SAMN39095003	2021-04-01	Spain: Asturias	-	843	0	25	33	41.40
43	GCA_001867185.1	Streptococcus thermophilus	UC8547del3	SAMN05463221	2010	Italy: Piacenza	-	844	0	18	33	37.59
44	GCA_001867245.1	Streptococcus thermophilus	UC8547	SAMN05463208	2005	Italy: Como	-	844	0	18	33	37.59
45	GCA_010500735.1	Streptococcus thermophilus	MV-FAST4	SAMN14001869	2019	Italy	-	844	0	22	33	39.66
46	GCA_019450015.1	Streptococcus thermophilus	Moz74	SAMN19136541	2020-11-09	Ireland	-	844	0	22	33	39.66
47	GCA_019450035.1	Streptococcus thermophilus	Moz77	SAMN19136542	2020-11-09	Ireland	-	844	0	23	33	40.22
48	GCA_026805425.1	Streptococcus thermophilus	ST30-8	SAMN30276017	-	-	-	844	0	23	33	40.22
49	GCA_027944055.1	Streptococcus thermophilus	TSGB 4241	SAMN32339320	2020-07	Turkey	-	844	0	21	33	39.12
50	GCA_000521285.1	Streptococcus thermophilus TH1435	TH1435	SAMN02401100	2011-04-01	Italy: Friuli Venezia Giulia	-	845	0	28	29	40.31
51	GCA_011801285.1	Streptococcus thermophilus	ST64987	SAMN12743474	2012-11	Netherlands	-	845	0	19	28	33.84
52	GCA_018966905.1	Streptococcus thermophilus	159	SAMN19670538	2004-09-16	Russia: Caucasus	-	845	0	27	33	42.64
53	GCA_019449835.1	Streptococcus thermophilus	Moz86	SAMN19116394	2020-11-09	Ireland	-	845	0	28	33	43.28
54	GCA_019449875.1	Streptococcus thermophilus	Rico66	SAMN19136588	2020-11-09	Ireland	-	845	0	28	33	43.28
55	GCA_019450065.1	Streptococcus thermophilus	FDL19	SAMN19836727	2020-11-09	Ireland	-	845	0	28	33	43.28
56	GCA_025187015.1	Streptococcus thermophilus	CIRM-BIA 2101	SAMN10365652	1975	Germany	-	845	0	21	32	38.28
57	GCA_025187235.1	Streptococcus thermophilus	CIRM-BIA 67	SAMN10365647	1971	France	-	845	0	21	32	38.28
58	GCA_025187265.1	Streptococcus thermophilus	CIRM-BIA 65	SAMN10365646	1971	France	-	845	0	21	32	38.28
59	GCA_025187275.1	Streptococcus thermophilus	CIRM-BIA 36	SAMN10365645	1971	France	-	845	0	21	32	38.28
60	GCA_025187645.1	Streptococcus thermophilus	CIRM-BIA 1056	SAMN10365627	1990	Indonesia	-	845	0	21	32	38.28
61	GCA_027557675.1	Streptococcus thermophilus	EG007	SAMN17736326	2018-03-21	South Korea: Seoul	-	845	0	28	27	38.90
62	GCA_027944035.1	Streptococcus thermophilus	TSGB 4242	SAMN32339321	2020-07	Turkey	-	845	0	22	32	38.83
63	GCA_034044695.1	Streptococcus thermophilus	KF8	SAMN38411847	2022-09-10	Russia: Moscow	-	845	0	27	33	42.64
64	GCA_036867615.1	Streptococcus thermophilus	St 18.1	SAMN39095004	2021-04-01	Spain: Asturias	-	845	0	23	33	40.22
65	GCA_036867635.1	Streptococcus thermophilus	St 8.1	SAMN39095002	2021-04-01	Spain: Asturias	-	845	0	23	32	39.41
66	GCA_039783785.1	Streptococcus thermophilus	CNRZ887	SAMN16933249	1995	Ireland	-	845	0	21	28	35.00
67	GCA_040784965.1	Streptococcus thermophilus	gbc_n	SAMN41082109	2021	USA: Glendale, Arizona	-	845	0	27	32	41.87
68	GCA_900492165.1	Streptococcus thermophilus	N4L	SAMEA4729876	-	-	-	845	0	23	29	37.01
69	GCA_903886385.1	Streptococcus thermophilus	-	SAMEA6957294	1971	France	-	845	0	21	28	35.00
70	GCA_903886475.1	Streptococcus thermophilus	-	SAMEA6957296	1971	France	-	845	0	21	28	35.00
71	GCA_903891305.1	Streptococcus thermophilus	-	SAMEA6957288	1975	Germany	-	845	0	21	28	35.00
72	GCA_903960675.1	Streptococcus thermophilus	-	SAMEA6957297	1971	France	-	845	0	21	27	34.21
73	GCA_000521305.1	Streptococcus thermophilus TH1436	TH1436	SAMN02402367	2011-04-01	Italy: Friuli Venezia Giulia	-	846	0	28	28	39.60
74	GCA_000572065.1	Streptococcus thermophilus TH982	TH982	SAMN02442657	2003-11-06	Italy: Campania	-	846	0	23	29	37.01
75	GCA_000971665.1	Streptococcus thermophilus	SMQ-301	SAMN02850632	1996-06	-	-	846	0	27	29	39.62
76	GCA_002914925.1	Streptococcus thermophilus	BT01	SAMN07187786	2017	Italy	-	846	0	35	32	47.42
77	GCA_003443395.1	Streptococcus thermophilus	ST106	SAMN09909637	-	USA:ERRC at Wyndmoor, PA	-	846	0	26	27	37.48
78	GCA_019449795.1	Streptococcus thermophilus	Rico65	SAMN19116208	2020-11-09	Ireland	-	846	0	21	33	39.12
79	GCA_019449815.1	Streptococcus thermophilus	Brie16	SAMN19116371	2020-11-09	Ireland	-	846	0	27	33	42.64
80	GCA_019450095.1	Streptococcus thermophilus	Moz76	SAMN19836723	2020-11-09	Ireland	-	846	0	35	33	48.10
81	GCA_020075965.1	Streptococcus thermophilus	DS61_14	SAMN15078830	2019-03-12	USA:MD	Homo sapiens	846	0	35	33	48.10
82	GCA_020076045.1	Streptococcus thermophilus	CF5_14	SAMN15078648	2018-03-12	USA:MD	Homo sapiens	846	0	35	32	47.42
83	GCA_020076065.1	Streptococcus thermophilus	CF8_14	SAMN15078656	2018-03-12	USA:MD	Homo sapiens	846	0	35	33	48.10
84	GCA_020076105.1	Streptococcus thermophilus	DS76_14	SAMN15078890	2019-03-12	USA:MD	Homo sapiens	846	0	35	32	47.42
85	GCA_020076115.1	Streptococcus thermophilus	CF4_14	SAMN15078639	2018-03-12	USA:MD	Homo sapiens	846	0	35	32	47.42
86	GCA_020076145.1	Streptococcus thermophilus	DS45_14	SAMN15078736	2019-03-12	USA:MD	Homo sapiens	846	0	35	33	48.10
87	GCA_020076365.1	Streptococcus thermophilus	DS51_14	SAMN15078775	2019-03-12	USA:MD	Homo sapiens	846	0	27	33	42.64
88	GCA_023893675.1	Streptococcus thermophilus	16t	SAMN29094259	1982	Georgia: Tbilisi	-	846	0	27	33	42.64
89	GCA_024334065.1	Streptococcus thermophilus	CH8	SAMN07809268	2005-02-07	Denmark	-	846	0	26	28	38.21
90	GCA_024665315.1	Streptococcus thermophilus	TH-4	SAMN29862205	-	-	Homo sapiens	846	0	35	28	44.82
91	GCA_025127245.1	Streptococcus thermophilus	980	SAMN10365144	1981	Switzerland	-	846	0	27	35	44.20
92	GCA_025186385.1	Streptococcus thermophilus	CIRM-BIA 1864	SAMN10365668	1962	Italy	-	846	0	27	32	41.87
93	GCA_025187495.1	Streptococcus thermophilus	CIRM-BIA 1363	SAMN10365634	1993	France	-	846	0	20	33	38.59
94	GCA_025187525.1	Streptococcus thermophilus	CIRM-BIA 1362	SAMN10365633	1993	France	-	846	0	25	33	41.40
95	GCA_025187605.1	Streptococcus thermophilus	CIRM-BIA 1360	SAMN10365629	1962	Italy	-	846	0	27	32	41.87
96	GCA_025187615.1	Streptococcus thermophilus	CIRM-BIA 2103	SAMN10365628	1987	Italy	-	846	0	27	32	41.87
97	GCA_025962735.1	Streptococcus thermophilus	UCCSt89	SAMN29795576	2017	Ireland	-	846	0	25	33	41.40
98	GCA_027944045.1	Streptococcus thermophilus	TSGB 4245	SAMN32339322	2020-07	Turkey	-	846	0	21	31	37.44
99	GCA_039783255.1	Streptococcus thermophilus	MM1	SAMN16933240	2017	Ireland	-	846	0	22	28	35.61
100	GCA_039783635.1	Streptococcus thermophilus	CNRZ1575	SAMN16933248	1995	Ireland	-	846	0	27	28	38.90