GCA_048657045.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAOCPGEPE_2 (original name was: gnl|Prokka|AOCPGEPE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	26,248	47,129

gnlProkkaAOCPGEPE_3 (original name was: gnl|Prokka|AOCPGEPE_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	T3PKS	147,668	188,837

gnlProkkaAOCPGEPE_4 (original name was: gnl|Prokka|AOCPGEPE_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	cyclic-lactone-autoinducer	258,561	279,266

gnlProkkaAOCPGEPE_33 (original name was: gnl|Prokka|AOCPGEPE_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	1	3,557

Region	Type	From	To	Similarity
Region 2.1	terpene	26,248	47,129
Region 3.1	T3PKS	147,668	188,837
Region 4.1	cyclic-lactone-autoinducer	258,561	279,266
Region 33.1	RiPP-like	1	3,557

No secondary metabolite regions were found in these records:: gnlProkkaAOCPGEPE_1 (original name was: gnl|Prokka|AOCPGEPE_1); gnlProkkaAOCPGEPE_5 (original name was: gnl|Prokka|AOCPGEPE_5); gnlProkkaAOCPGEPE_6 (original name was: gnl|Prokka|AOCPGEPE_6); gnlProkkaAOCPGEPE_7 (original name was: gnl|Prokka|AOCPGEPE_7); gnlProkkaAOCPGEPE_8 (original name was: gnl|Prokka|AOCPGEPE_8); gnlProkkaAOCPGEPE_9 (original name was: gnl|Prokka|AOCPGEPE_9); gnlProkkaAOCPGEPE_10 (original name was: gnl|Prokka|AOCPGEPE_10); gnlProkkaAOCPGEPE_11 (original name was: gnl|Prokka|AOCPGEPE_11); gnlProkkaAOCPGEPE_12 (original name was: gnl|Prokka|AOCPGEPE_12); gnlProkkaAOCPGEPE_13 (original name was: gnl|Prokka|AOCPGEPE_13); gnlProkkaAOCPGEPE_14 (original name was: gnl|Prokka|AOCPGEPE_14); gnlProkkaAOCPGEPE_15 (original name was: gnl|Prokka|AOCPGEPE_15); gnlProkkaAOCPGEPE_16 (original name was: gnl|Prokka|AOCPGEPE_16); gnlProkkaAOCPGEPE_17 (original name was: gnl|Prokka|AOCPGEPE_17); gnlProkkaAOCPGEPE_18 (original name was: gnl|Prokka|AOCPGEPE_18); gnlProkkaAOCPGEPE_19 (original name was: gnl|Prokka|AOCPGEPE_19); gnlProkkaAOCPGEPE_20 (original name was: gnl|Prokka|AOCPGEPE_20); gnlProkkaAOCPGEPE_21 (original name was: gnl|Prokka|AOCPGEPE_21); gnlProkkaAOCPGEPE_22 (original name was: gnl|Prokka|AOCPGEPE_22); gnlProkkaAOCPGEPE_23 (original name was: gnl|Prokka|AOCPGEPE_23); gnlProkkaAOCPGEPE_24 (original name was: gnl|Prokka|AOCPGEPE_24); gnlProkkaAOCPGEPE_25 (original name was: gnl|Prokka|AOCPGEPE_25); gnlProkkaAOCPGEPE_26 (original name was: gnl|Prokka|AOCPGEPE_26); gnlProkkaAOCPGEPE_27 (original name was: gnl|Prokka|AOCPGEPE_27); gnlProkkaAOCPGEPE_28 (original name was: gnl|Prokka|AOCPGEPE_28); gnlProkkaAOCPGEPE_29 (original name was: gnl|Prokka|AOCPGEPE_29); gnlProkkaAOCPGEPE_30 (original name was: gnl|Prokka|AOCPGEPE_30); gnlProkkaAOCPGEPE_31 (original name was: gnl|Prokka|AOCPGEPE_31); gnlProkkaAOCPGEPE_32 (original name was: gnl|Prokka|AOCPGEPE_32); gnlProkkaAOCPGEPE_34 (original name was: gnl|Prokka|AOCPGEPE_34); gnlProkkaAOCPGEPE_35 (original name was: gnl|Prokka|AOCPGEPE_35); gnlProkkaAOCPGEPE_36 (original name was: gnl|Prokka|AOCPGEPE_36); gnlProkkaAOCPGEPE_37 (original name was: gnl|Prokka|AOCPGEPE_37); gnlProkkaAOCPGEPE_38 (original name was: gnl|Prokka|AOCPGEPE_38); gnlProkkaAOCPGEPE_39 (original name was: gnl|Prokka|AOCPGEPE_39); gnlProkkaAOCPGEPE_40 (original name was: gnl|Prokka|AOCPGEPE_40)

Compact view

gnlProkkaAOCPGEPE_2 - Region 1 - terpene

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Location: 26,248 - 47,129 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOCPGEPE_3 - Region 1 - T3PKS

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Location: 147,668 - 188,837 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOCPGEPE_4 - Region 1 - cyclic-lactone-autoinducer

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Location: 258,561 - 279,266 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOCPGEPE_33 - Region 1 - RiPP-like

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Location: 1 - 3,557 nt. (total: 3,557 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.