Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_049192055.1	Bifidobacterium bifidum	IATA016	SAMN45053945	2022	Spain:Valencia	Homo sapiens	0	2	0	0	2.00
2	GCA_049192085.1	Bifidobacterium bifidum	IATA001	SAMN45053939	2022	Spain:Valencia	Homo sapiens	12	2	0	0	2.00
3	GCA_003094715.1	Bifidobacterium bifidum	DS32_23	SAMN08949005	2017-08-24	USA:MD	Homo sapiens	938	2	0	0	2.00
4	GCA_003094755.1	Bifidobacterium bifidum	DS30_23	SAMN08949003	2018-01-11	USA:MD	Homo sapiens	1024	2	0	0	2.00
5	GCA_020908005.1	Bifidobacterium bifidum	ICIS-504	SAMN22746550	2016	Russia: Orenburg	Homo sapiens	1024	2	0	0	2.00
6	GCA_028202785.1	Bifidobacterium bifidum	1001216st1_E8_1001216I_160404	SAMN31321328	2016-04-04	USA	Homo sapiens	1024	2	0	0	2.00
7	GCA_028202835.1	Bifidobacterium bifidum	1001216st1_H8_1001216I_160404	SAMN31321331	2016-04-04	USA	Homo sapiens	1024	2	0	0	2.00
8	GCA_029723435.1	Bifidobacterium bifidum	LH_1044	SAMN24838607	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
9	GCA_029723555.1	Bifidobacterium bifidum	LH_1036	SAMN24838606	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
10	GCA_029723565.1	Bifidobacterium bifidum	LH_1017	SAMN24838604	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
11	GCA_029723595.1	Bifidobacterium bifidum	LH_1016	SAMN24838603	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
12	GCA_029723675.1	Bifidobacterium bifidum	LH_1013	SAMN24838602	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
13	GCA_029723695.1	Bifidobacterium bifidum	LH_986	SAMN24838598	2017	United Kingdom	Homo sapiens	1024	2	0	0	2.00
14	GCA_033959405.1	Bifidobacterium bifidum	BB11	SAMN38280574	1990-05-25	South Africa	Bos taurus	1024	2	0	0	2.00
15	GCA_034427835.1	Bifidobacterium bifidum	CCRC11847	SAMN38289445	1990-05-25	South Africa	Bos taurus	1024	2	0	0	2.00
16	GCA_001020245.1	Bifidobacterium bifidum	A8	SAMN03097401	-	-	Homo sapiens	1025	2	0	0	2.00
17	GCA_003094645.1	Bifidobacterium bifidum	DS33_23	SAMN08949006	2017-11-03	USA:MD	Homo sapiens	1025	2	0	0	2.00
18	GCA_028202595.1	Bifidobacterium bifidum	1001216st1_H2_BSD2780120875b_170604	SAMN31321329	2017-06-04	USA	Homo sapiens	1025	2	0	0	2.00
19	GCA_028202615.1	Bifidobacterium bifidum	1001216st1_B8_1028SCRN_200821	SAMN31321327	2020-08-21	USA	Homo sapiens	1025	2	0	0	2.00
20	GCA_003094735.1	Bifidobacterium bifidum	DS31_23	SAMN08949004	2018-03-12	USA:MD	Homo sapiens	1026	2	0	0	2.00
21	GCA_024341745.1	Bifidobacterium bifidum JCM 1254	-	SAMD00422522	-	-	-	1026	1	0	0	1.00
22	GCA_001020275.1	Bifidobacterium bifidum	LMG 11582	SAMN03097403	-	-	Homo sapiens	1027	2	0	0	2.00
23	GCA_003094795.1	Bifidobacterium bifidum	DS25_23	SAMN08949001	2017-03-29	USA:MD	Homo sapiens	1027	2	0	0	2.00
24	GCA_029011515.1	Bifidobacterium bifidum	VSI20	SAMN33275447	2020-12-04	USA: Houston, TX	Homo sapiens	1027	2	0	0	2.00
25	GCA_003095035.1	Bifidobacterium bifidum	DS26_23	SAMN08949002	2018-04-17	USA:MD	Homo sapiens	1028	2	0	0	2.00
26	GCA_016069985.1	Bifidobacterium bifidum	VKPM Ac-1579	SAMN15880060	2019	Russia: Moscow	Homo sapiens	1036	2	0	0	2.00
27	GCA_001595435.1	Bifidobacterium bifidum	791	SAMN04155634	1993-04-23	Russia: Nizhny Novgorod	Homo sapiens	1044	2	0	0	2.00
28	GCA_002114145.1	Bifidobacterium bifidum	ICIS-310	SAMN05858649	2013-11-02	Russia: South Ural	Homo sapiens	1044	2	0	0	2.00
29	GCA_004799295.1	Bifidobacterium bifidum	ICIS-202	SAMN07709009	2016	Russia: Orenburg	Homo sapiens	1044	2	0	0	2.00
30	GCA_020861855.1	Bifidobacterium bifidum	ICIS-176	SAMN22746553	2016	Russia: Orenburg	Homo sapiens	1044	3	0	0	3.00
31	GCA_022014355.1	Bifidobacterium bifidum	791	SAMN06611220	2014	Russia: Orenburg	Homo sapiens	1044	2	0	0	2.00
32	GCA_028202695.1	Bifidobacterium bifidum	1001216st1_H5_1028SCRN_200821	SAMN31321330	2020-08-21	USA	Homo sapiens	1044	2	0	0	2.00
33	GCA_020710245.1	Bifidobacterium bifidum	ICIS-629	SAMN22555201	2016	Russia: Orenburg	Homo sapiens	1045	3	0	0	3.00
34	GCA_003790385.1	Bifidobacterium bifidum	ICIS-643	SAMN06606988	2014	Russia: South Ural	Homo sapiens	1046	2	0	0	2.00
35	GCA_016070035.1	Bifidobacterium bifidum	VKPM Ac-1784	SAMN15880062	2019	Russia: Moscow	Homo sapiens	1046	2	0	0	2.00
36	GCA_026076095.1	Bifidobacterium bifidum	P671	SAMN31654352	2018	Spain	Homo sapiens	1046	4	0	0	4.00
37	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	-	-	Homo sapiens	1060	2	0	0	2.00
38	GCA_001020335.1	Bifidobacterium bifidum	LMG 11583	SAMN03097404	-	-	Homo sapiens	1060	2	0	0	2.00
39	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1060	2	0	0	2.00
40	GCA_008868415.1	Bifidobacterium bifidum	BIO5480	SAMN12856545	-	-	Homo sapiens	1061	2	0	0	2.00
41	GCA_049205235.1	Bifidobacterium bifidum	IATA102	SAMN45053967	2022	Spain:Valencia	Homo sapiens	1078	2	0	0	2.00
42	GCA_049191345.1	Bifidobacterium bifidum	IATA139	SAMN45053983	2022	Spain:Valencia	Homo sapiens	1079	2	0	0	2.00
43	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	1082	4	0	0	4.00
44	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	2022	Spain:Valencia	Homo sapiens	1082	2	0	0	2.00
45	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	1083	2	0	0	2.00
46	GCA_003573955.1	Bifidobacterium bifidum LMG 13195	-	SAMD00078038	-	-	-	1083	2	0	0	2.00
47	GCA_045290295.1	Bifidobacterium bifidum	lw02	SAMN39525295	2017-10-12	China	Homo sapiens	1083	4	0	0	4.00
48	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	-	-	Homo sapiens	1084	2	0	0	2.00
49	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1084	2	0	0	2.00
50	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	-	-	1085	2	0	0	2.00
51	GCA_003573895.1	Bifidobacterium bifidum	-	SAMD00078313	-	-	-	1085	2	0	0	2.00
52	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
53	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
54	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1086	2	1	0	2.24
55	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
56	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1086	3	1	0	3.16
57	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1086	3	0	0	3.00
58	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
59	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
60	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
61	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1086	2	0	0	2.00
62	GCA_049191915.1	Bifidobacterium bifidum	IATA049	SAMN45053955	2022	Spain:Valencia	Homo sapiens	1086	2	0	0	2.00
63	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1087	2	0	0	2.00
64	GCA_028203855.1	Bifidobacterium bifidum	D53st1_A12_D53t1_180928	SAMN31321365	2018-09-28	USA	Homo sapiens	1087	2	0	0	2.00
65	GCA_028203835.1	Bifidobacterium bifidum	D53st1_B4_D53t1_180928	SAMN31321366	2018-09-28	USA	Homo sapiens	1088	2	0	0	2.00
66	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	2015-12-09	USA:Boston	Homo sapiens	1089	2	0	0	2.00
67	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1089	2	0	0	2.00
68	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1090	2	0	0	2.00
69	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	1091	4	0	0	4.00
70	GCA_009160775.1	Bifidobacterium bifidum	BIOML-A18	SAMN11944608	2015-12-09	USA:Boston	Homo sapiens	1091	2	0	0	2.00
71	GCA_020892075.1	Bifidobacterium bifidum	-	SAMD00324644	-	-	-	1091	3	0	0	3.00
72	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1091	2	0	0	2.00
73	GCA_001546225.1	Bifidobacterium bifidum	MJR8628B	SAMN03842220	-	-	Homo sapiens	1092	2	0	0	2.00
74	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1092	2	0	0	2.00
75	GCA_049191965.1	Bifidobacterium bifidum	IATA039	SAMN45053952	2022	Spain:Valencia	Homo sapiens	1092	1	0	0	1.00
76	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1093	3	0	0	3.00
77	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1093	2	0	0	2.00
78	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1093	2	0	0	2.00
79	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1094	2	0	0	2.00
80	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	2015-01	USA: Cambridge	Homo sapiens	1094	3	0	0	3.00
81	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	2015-03-31	USA:Boston	Homo sapiens	1094	3	0	0	3.00
82	GCA_009075785.1	Bifidobacterium bifidum	BIOML-A1	SAMN11944591	2015-03-31	USA:Boston	Homo sapiens	1094	3	0	0	3.00
83	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	2015-03-31	USA:Boston	Homo sapiens	1094	3	0	0	3.00
84	GCA_009078065.1	Bifidobacterium bifidum	BIOML-A3	SAMN11944593	2015-03-31	USA:Boston	Homo sapiens	1094	3	0	0	3.00
85	GCA_009078095.1	Bifidobacterium bifidum	BIOML-A9	SAMN11944599	2015-03-31	USA:Boston	Homo sapiens	1094	3	0	0	3.00
86	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	1094	2	0	0	2.00
87	GCA_042848835.1	Bifidobacterium bifidum	i03-0019-A5	SAMD00758988	2017-12-15	Japan	Homo sapiens	1094	2	0	0	2.00
88	GCA_001020265.1	Bifidobacterium bifidum	IPLA 20017	SAMN03097402	-	-	Homo sapiens	1095	2	0	0	2.00
89	GCA_009077955.1	Bifidobacterium bifidum	BIOML-A7	SAMN11944597	2015-03-31	USA:Boston	Homo sapiens	1095	3	0	0	3.00
90	GCA_009077975.1	Bifidobacterium bifidum	BIOML-A6	SAMN11944596	2015-03-31	USA:Boston	Homo sapiens	1095	3	0	0	3.00
91	GCA_009078005.1	Bifidobacterium bifidum	BIOML-A5	SAMN11944595	2015-03-31	USA:Boston	Homo sapiens	1095	3	0	0	3.00
92	GCA_009078015.1	Bifidobacterium bifidum	BIOML-A4	SAMN11944594	2015-03-31	USA:Boston	Homo sapiens	1095	3	0	0	3.00
93	GCA_009160865.1	Bifidobacterium bifidum	BIOML-A16	SAMN11944606	2015-12-09	USA:Boston	Homo sapiens	1095	2	0	0	2.00
94	GCA_027215325.1	Bifidobacterium bifidum	SDS-1425-OWp	SAMN32244237	2019-07-10	Canada: Vancouver	Homo sapiens	1095	2	0	0	2.00
95	GCA_027215545.1	Bifidobacterium bifidum	SDS-1424-OWp	SAMN32244263	2019-06-28	Canada: Vancouver	Homo sapiens	1095	2	0	0	2.00
96	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1095	2	0	0	2.00
97	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	1095	3	0	0	3.00
98	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	2021-01-17	USA	Homo sapiens	1095	3	0	0	3.00
99	GCA_028202455.1	Bifidobacterium bifidum	H2_hBSD2780061687b_210117	SAMN31321404	2021-01-17	USA	Homo sapiens	1095	3	0	0	3.00
100	GCA_028202535.1	Bifidobacterium bifidum	E4_hBSD2780061687b_210117	SAMN31321400	2021-01-17	USA	Homo sapiens	1095	3	0	0	3.00