Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_049205235.1	Bifidobacterium bifidum	IATA102	SAMN45053967	2022	Spain:Valencia	Homo sapiens	0	2	0	0	2.00
2	GCA_049191345.1	Bifidobacterium bifidum	IATA139	SAMN45053983	2022	Spain:Valencia	Homo sapiens	26	2	0	0	2.00
3	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	-	-	Homo sapiens	834	2	0	0	2.00
4	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	-	-	1056	2	0	0	2.00
5	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1056	2	0	0	2.00
6	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1057	2	0	0	2.00
7	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1058	2	0	0	2.00
8	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1064	2	0	0	2.00
9	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1064	2	0	0	2.00
10	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	1065	4	0	0	4.00
11	GCA_003094715.1	Bifidobacterium bifidum	DS32_23	SAMN08949005	2017-08-24	USA:MD	Homo sapiens	1067	2	0	0	2.00
12	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1068	2	0	0	2.00
13	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1068	2	0	0	2.00
14	GCA_028202675.1	Bifidobacterium bifidum	1001271st1_H11_1001271B_150615	SAMN31321335	2015-06-15	USA	Homo sapiens	1069	3	0	0	3.00
15	GCA_028202815.1	Bifidobacterium bifidum	1001271st1_A6_1001270H_150608	SAMN31321332	2015-06-08	USA	Homo sapiens	1069	3	0	0	3.00
16	GCA_049191915.1	Bifidobacterium bifidum	IATA049	SAMN45053955	2022	Spain:Valencia	Homo sapiens	1069	2	0	0	2.00
17	GCA_028202735.1	Bifidobacterium bifidum	1001271st1_F2_1001271B_151109	SAMN31321333	2015-11-09	USA	Homo sapiens	1070	3	0	0	3.00
18	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1070	2	0	0	2.00
19	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1070	2	0	0	2.00
20	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1071	2	0	0	2.00
21	GCA_028202715.1	Bifidobacterium bifidum	1001271st1_G7_1001270J_160509	SAMN31321334	2016-05-09	USA	Homo sapiens	1072	2	0	0	2.00
22	GCA_028203855.1	Bifidobacterium bifidum	D53st1_A12_D53t1_180928	SAMN31321365	2018-09-28	USA	Homo sapiens	1072	2	0	0	2.00
23	GCA_028203835.1	Bifidobacterium bifidum	D53st1_B4_D53t1_180928	SAMN31321366	2018-09-28	USA	Homo sapiens	1073	2	0	0	2.00
24	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1074	2	0	0	2.00
25	GCA_003094755.1	Bifidobacterium bifidum	DS30_23	SAMN08949003	2018-01-11	USA:MD	Homo sapiens	1075	2	0	0	2.00
26	GCA_003095035.1	Bifidobacterium bifidum	DS26_23	SAMN08949002	2018-04-17	USA:MD	Homo sapiens	1075	2	0	0	2.00
27	GCA_020908005.1	Bifidobacterium bifidum	ICIS-504	SAMN22746550	2016	Russia: Orenburg	Homo sapiens	1075	2	0	0	2.00
28	GCA_024341745.1	Bifidobacterium bifidum JCM 1254	-	SAMD00422522	-	-	-	1075	1	0	0	1.00
29	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
30	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
31	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1075	2	0	0	2.00
32	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1075	2	0	0	2.00
33	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1075	2	0	0	2.00
34	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1075	2	0	0	2.00
35	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1075	2	0	0	2.00
36	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1075	3	0	0	3.00
37	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1075	3	0	0	3.00
38	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1075	3	0	0	3.00
39	GCA_028202595.1	Bifidobacterium bifidum	1001216st1_H2_BSD2780120875b_170604	SAMN31321329	2017-06-04	USA	Homo sapiens	1075	2	0	0	2.00
40	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1075	2	0	0	2.00
41	GCA_028202615.1	Bifidobacterium bifidum	1001216st1_B8_1028SCRN_200821	SAMN31321327	2020-08-21	USA	Homo sapiens	1075	2	0	0	2.00
42	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1075	2	0	0	2.00
43	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
44	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
45	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
46	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
47	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
48	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
49	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
50	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
51	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1075	2	0	0	2.00
52	GCA_029723435.1	Bifidobacterium bifidum	LH_1044	SAMN24838607	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
53	GCA_029723555.1	Bifidobacterium bifidum	LH_1036	SAMN24838606	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
54	GCA_029723565.1	Bifidobacterium bifidum	LH_1017	SAMN24838604	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
55	GCA_029723595.1	Bifidobacterium bifidum	LH_1016	SAMN24838603	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
56	GCA_029723675.1	Bifidobacterium bifidum	LH_1013	SAMN24838602	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
57	GCA_029723695.1	Bifidobacterium bifidum	LH_986	SAMN24838598	2017	United Kingdom	Homo sapiens	1075	2	0	0	2.00
58	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1075	3	0	1	3.16
59	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	1076	4	0	0	4.00
60	GCA_001020275.1	Bifidobacterium bifidum	LMG 11582	SAMN03097403	-	-	Homo sapiens	1076	2	0	0	2.00
61	GCA_001020355.1	Bifidobacterium bifidum	85B	SAMN03097398	-	-	Homo sapiens	1076	3	0	0	3.00
62	GCA_003094795.1	Bifidobacterium bifidum	DS25_23	SAMN08949001	2017-03-29	USA:MD	Homo sapiens	1076	2	0	0	2.00
63	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1076	2	0	0	2.00
64	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1076	2	0	0	2.00
65	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1076	2	0	0	2.00
66	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1076	2	0	0	2.00
67	GCA_028202785.1	Bifidobacterium bifidum	1001216st1_E8_1001216I_160404	SAMN31321328	2016-04-04	USA	Homo sapiens	1076	2	0	0	2.00
68	GCA_028202835.1	Bifidobacterium bifidum	1001216st1_H8_1001216I_160404	SAMN31321331	2016-04-04	USA	Homo sapiens	1076	2	0	0	2.00
69	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1076	2	0	0	2.00
70	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1076	2	0	0	2.00
71	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1076	2	0	0	2.00
72	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1076	2	0	0	2.00
73	GCA_033959405.1	Bifidobacterium bifidum	BB11	SAMN38280574	1990-05-25	South Africa	Bos taurus	1076	2	0	0	2.00
74	GCA_034427835.1	Bifidobacterium bifidum	CCRC11847	SAMN38289445	1990-05-25	South Africa	Bos taurus	1076	2	0	0	2.00
75	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1077	3	0	0	3.00
76	GCA_001020245.1	Bifidobacterium bifidum	A8	SAMN03097401	-	-	Homo sapiens	1077	2	0	0	2.00
77	GCA_003094645.1	Bifidobacterium bifidum	DS33_23	SAMN08949006	2017-11-03	USA:MD	Homo sapiens	1077	2	0	0	2.00
78	GCA_003094735.1	Bifidobacterium bifidum	DS31_23	SAMN08949004	2018-03-12	USA:MD	Homo sapiens	1077	2	0	0	2.00
79	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1077	2	0	0	2.00
80	GCA_029011515.1	Bifidobacterium bifidum	VSI20	SAMN33275447	2020-12-04	USA: Houston, TX	Homo sapiens	1077	2	0	0	2.00
81	GCA_039913195.1	Bifidobacterium bifidum	H3_hBSD2780061687_210209	SAMN31321393	2021-02-09	USA	Homo sapiens	1077	4	0	0	4.00
82	GCA_039913275.1	Bifidobacterium bifidum	F12_hBSD2780061687_210209	SAMN31321391	2021-02-09	USA	Homo sapiens	1077	4	0	0	4.00
83	GCA_028203575.1	Bifidobacterium bifidum	F10_hBSD2780061687_210209	SAMN31321389	2021-02-09	USA	Homo sapiens	1078	4	0	0	4.00
84	GCA_039913335.1	Bifidobacterium bifidum	E4_hBSD2780061687_210209	SAMN31321387	2021-02-09	USA	Homo sapiens	1078	4	0	0	4.00
85	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	2021	United Kingdom: Norwich	Homo sapiens	1078	2	0	0	2.00
86	GCA_049192055.1	Bifidobacterium bifidum	IATA016	SAMN45053945	2022	Spain:Valencia	Homo sapiens	1078	2	0	0	2.00
87	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	1079	2	0	0	2.00
88	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	2013-08-01	China: Shenzhen	Homo sapiens	1079	3	0	0	3.00
89	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
90	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	1079	2	0	0	2.00
91	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	1079	2	0	0	2.00
92	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1079	2	0	0	2.00
93	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
94	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
95	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
96	GCA_028202495.1	Bifidobacterium bifidum	H9_hBSD2780061687_210209	SAMN31321394	2021-02-09	USA	Homo sapiens	1079	4	0	0	4.00
97	GCA_039913255.1	Bifidobacterium bifidum	F11_hBSD2780061687_210209	SAMN31321390	2021-02-09	USA	Homo sapiens	1079	4	0	0	4.00
98	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
99	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	1080	4	0	0	4.00
100	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	1080	4	0	0	4.00