GCA_049524795.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIPGENCNA_1 (original name was: gnl|Prokka|IPGENCNA_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	219,876	240,581

gnlProkkaIPGENCNA_9 (original name was: gnl|Prokka|IPGENCNA_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	88,908	109,789

gnlProkkaIPGENCNA_11 (original name was: gnl|Prokka|IPGENCNA_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	85,317	126,486

gnlProkkaIPGENCNA_12 (original name was: gnl|Prokka|IPGENCNA_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	241	11,455

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	219,876	240,581
Region 9.1	terpene	88,908	109,789
Region 11.1	T3PKS	85,317	126,486
Region 12.1	RiPP-like	241	11,455

No secondary metabolite regions were found in these records:: gnlProkkaIPGENCNA_2 (original name was: gnl|Prokka|IPGENCNA_2); gnlProkkaIPGENCNA_3 (original name was: gnl|Prokka|IPGENCNA_3); gnlProkkaIPGENCNA_4 (original name was: gnl|Prokka|IPGENCNA_4); gnlProkkaIPGENCNA_5 (original name was: gnl|Prokka|IPGENCNA_5); gnlProkkaIPGENCNA_6 (original name was: gnl|Prokka|IPGENCNA_6); gnlProkkaIPGENCNA_7 (original name was: gnl|Prokka|IPGENCNA_7); gnlProkkaIPGENCNA_8 (original name was: gnl|Prokka|IPGENCNA_8); gnlProkkaIPGENCNA_10 (original name was: gnl|Prokka|IPGENCNA_10); gnlProkkaIPGENCNA_13 (original name was: gnl|Prokka|IPGENCNA_13); gnlProkkaIPGENCNA_14 (original name was: gnl|Prokka|IPGENCNA_14); gnlProkkaIPGENCNA_15 (original name was: gnl|Prokka|IPGENCNA_15); gnlProkkaIPGENCNA_16 (original name was: gnl|Prokka|IPGENCNA_16); gnlProkkaIPGENCNA_17 (original name was: gnl|Prokka|IPGENCNA_17); gnlProkkaIPGENCNA_18 (original name was: gnl|Prokka|IPGENCNA_18); gnlProkkaIPGENCNA_19 (original name was: gnl|Prokka|IPGENCNA_19); gnlProkkaIPGENCNA_20 (original name was: gnl|Prokka|IPGENCNA_20); gnlProkkaIPGENCNA_21 (original name was: gnl|Prokka|IPGENCNA_21); gnlProkkaIPGENCNA_22 (original name was: gnl|Prokka|IPGENCNA_22); gnlProkkaIPGENCNA_23 (original name was: gnl|Prokka|IPGENCNA_23); gnlProkkaIPGENCNA_24 (original name was: gnl|Prokka|IPGENCNA_24); gnlProkkaIPGENCNA_25 (original name was: gnl|Prokka|IPGENCNA_25); gnlProkkaIPGENCNA_26 (original name was: gnl|Prokka|IPGENCNA_26); gnlProkkaIPGENCNA_27 (original name was: gnl|Prokka|IPGENCNA_27); gnlProkkaIPGENCNA_28 (original name was: gnl|Prokka|IPGENCNA_28); gnlProkkaIPGENCNA_29 (original name was: gnl|Prokka|IPGENCNA_29); gnlProkkaIPGENCNA_30 (original name was: gnl|Prokka|IPGENCNA_30); gnlProkkaIPGENCNA_31 (original name was: gnl|Prokka|IPGENCNA_31); gnlProkkaIPGENCNA_32 (original name was: gnl|Prokka|IPGENCNA_32); gnlProkkaIPGENCNA_33 (original name was: gnl|Prokka|IPGENCNA_33); gnlProkkaIPGENCNA_34 (original name was: gnl|Prokka|IPGENCNA_34); gnlProkkaIPGENCNA_35 (original name was: gnl|Prokka|IPGENCNA_35); gnlProkkaIPGENCNA_36 (original name was: gnl|Prokka|IPGENCNA_36); gnlProkkaIPGENCNA_37 (original name was: gnl|Prokka|IPGENCNA_37); gnlProkkaIPGENCNA_38 (original name was: gnl|Prokka|IPGENCNA_38); gnlProkkaIPGENCNA_39 (original name was: gnl|Prokka|IPGENCNA_39); gnlProkkaIPGENCNA_40 (original name was: gnl|Prokka|IPGENCNA_40); gnlProkkaIPGENCNA_41 (original name was: gnl|Prokka|IPGENCNA_41); gnlProkkaIPGENCNA_42 (original name was: gnl|Prokka|IPGENCNA_42); gnlProkkaIPGENCNA_43 (original name was: gnl|Prokka|IPGENCNA_43); gnlProkkaIPGENCNA_44 (original name was: gnl|Prokka|IPGENCNA_44); gnlProkkaIPGENCNA_45 (original name was: gnl|Prokka|IPGENCNA_45); gnlProkkaIPGENCNA_46 (original name was: gnl|Prokka|IPGENCNA_46); gnlProkkaIPGENCNA_47 (original name was: gnl|Prokka|IPGENCNA_47); gnlProkkaIPGENCNA_48 (original name was: gnl|Prokka|IPGENCNA_48); gnlProkkaIPGENCNA_49 (original name was: gnl|Prokka|IPGENCNA_49); gnlProkkaIPGENCNA_50 (original name was: gnl|Prokka|IPGENCNA_50); gnlProkkaIPGENCNA_51 (original name was: gnl|Prokka|IPGENCNA_51); gnlProkkaIPGENCNA_52 (original name was: gnl|Prokka|IPGENCNA_52); gnlProkkaIPGENCNA_53 (original name was: gnl|Prokka|IPGENCNA_53); gnlProkkaIPGENCNA_54 (original name was: gnl|Prokka|IPGENCNA_54); gnlProkkaIPGENCNA_55 (original name was: gnl|Prokka|IPGENCNA_55); gnlProkkaIPGENCNA_56 (original name was: gnl|Prokka|IPGENCNA_56); gnlProkkaIPGENCNA_57 (original name was: gnl|Prokka|IPGENCNA_57); gnlProkkaIPGENCNA_58 (original name was: gnl|Prokka|IPGENCNA_58); gnlProkkaIPGENCNA_59 (original name was: gnl|Prokka|IPGENCNA_59); gnlProkkaIPGENCNA_60 (original name was: gnl|Prokka|IPGENCNA_60); gnlProkkaIPGENCNA_61 (original name was: gnl|Prokka|IPGENCNA_61); gnlProkkaIPGENCNA_62 (original name was: gnl|Prokka|IPGENCNA_62); gnlProkkaIPGENCNA_63 (original name was: gnl|Prokka|IPGENCNA_63); gnlProkkaIPGENCNA_64 (original name was: gnl|Prokka|IPGENCNA_64); gnlProkkaIPGENCNA_65 (original name was: gnl|Prokka|IPGENCNA_65); gnlProkkaIPGENCNA_66 (original name was: gnl|Prokka|IPGENCNA_66); gnlProkkaIPGENCNA_67 (original name was: gnl|Prokka|IPGENCNA_67)

Compact view

gnlProkkaIPGENCNA_1 - Region 1 - cyclic-lactone-autoinducer

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Location: 219,876 - 240,581 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIPGENCNA_9 - Region 1 - terpene

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Location: 88,908 - 109,789 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIPGENCNA_11 - Region 1 - T3PKS

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Location: 85,317 - 126,486 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIPGENCNA_12 - Region 1 - RiPP-like

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Location: 241 - 11,455 nt. (total: 11,215 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.