Select genomic region:
Overview
3.1
3.2
3.3
3.4
3.5
5.1
8.1
9.1
10.1
10.2
10.3
11.1
13.1

### Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOBHDJAFP_3 (original name was: gnl|Prokka|OBHDJAFP_3)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 3.1 | other | 317,452 | 358,870 | bacilysin | Other | 100%
Region 3.2 | sactipeptide | 362,174 | 383,785 | subtilosin A | RiPP:Thiopeptide | 100%
Region 3.3 | CDPS | 611,265 | 632,011 | pulcherriminic acid | Other | 100%
Region 3.4 | lanthipeptide-class-i | 761,294 | 787,519 | subtilin | RiPP:Lanthipeptide | 100%
Region 3.5 | NRP-metallophore,NRPS | 931,650 | 983,427 | bacillibactin | NRP | 100%

gnlProkkaOBHDJAFP_5 (original name was: gnl|Prokka|OBHDJAFP_5)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 5.1 | NRPS | 1 | 24,930 | plipastatin | NRP | 30%

gnlProkkaOBHDJAFP_8 (original name was: gnl|Prokka|OBHDJAFP_8)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 8.1 | NRPS,betalactone | 1 | 27,546 | fengycin | NRP | 73%

gnlProkkaOBHDJAFP_9 (original name was: gnl|Prokka|OBHDJAFP_9)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 9.1 | transAT-PKS,NRPS,T3PKS,PKS-like | 5,266 | 120,017 | bacillaene | Polyketide+NRP | 100%

gnlProkkaOBHDJAFP_10 (original name was: gnl|Prokka|OBHDJAFP_10)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 10.1 | T3PKS | 796,843 | 837,940 | 1-carbapen-2-em-3-carboxylic acid | Other | 16%
Region 10.2 | terpene | 885,677 | 907,575 |
Region 10.3 | NRPS | 979,044 | 1,000,657 | plipastatin | NRP | 30%

gnlProkkaOBHDJAFP_11 (original name was: gnl|Prokka|OBHDJAFP_11)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 11.1 | terpene | 92,459 | 113,262 |

gnlProkkaOBHDJAFP_13 (original name was: gnl|Prokka|OBHDJAFP_13)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 13.1 | NRPS | 195,113 | 260,504 | surfactin | NRP:Lipopeptide | 82%

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 3.1 | other | 317,452 | 358,870 | bacilysin | Other | 100%
Region 3.2 | sactipeptide | 362,174 | 383,785 | subtilosin A | RiPP:Thiopeptide | 100%
Region 3.3 | CDPS | 611,265 | 632,011 | pulcherriminic acid | Other | 100%
Region 3.4 | lanthipeptide-class-i | 761,294 | 787,519 | subtilin | RiPP:Lanthipeptide | 100%
Region 3.5 | NRP-metallophore,NRPS | 931,650 | 983,427 | bacillibactin | NRP | 100%
Region 5.1 | NRPS | 1 | 24,930 | plipastatin | NRP | 30%
Region 8.1 | NRPS,betalactone | 1 | 27,546 | fengycin | NRP | 73%
Region 9.1 | transAT-PKS,NRPS,T3PKS,PKS-like | 5,266 | 120,017 | bacillaene | Polyketide+NRP | 100%
Region 10.1 | T3PKS | 796,843 | 837,940 | 1-carbapen-2-em-3-carboxylic acid | Other | 16%
Region 10.2 | terpene | 885,677 | 907,575 |
Region 10.3 | NRPS | 979,044 | 1,000,657 | plipastatin | NRP | 30%
Region 11.1 | terpene | 92,459 | 113,262 |
Region 13.1 | NRPS | 195,113 | 260,504 | surfactin | NRP:Lipopeptide | 82%

No secondary metabolite regions were found in these records:
  gnlProkkaOBHDJAFP_1 (original name was: gnl|Prokka|OBHDJAFP_1)
  gnlProkkaOBHDJAFP_2 (original name was: gnl|Prokka|OBHDJAFP_2)
  gnlProkkaOBHDJAFP_4 (original name was: gnl|Prokka|OBHDJAFP_4)
  gnlProkkaOBHDJAFP_6 (original name was: gnl|Prokka|OBHDJAFP_6)
  gnlProkkaOBHDJAFP_7 (original name was: gnl|Prokka|OBHDJAFP_7)
  gnlProkkaOBHDJAFP_12 (original name was: gnl|Prokka|OBHDJAFP_12)
  gnlProkkaOBHDJAFP_14 (original name was: gnl|Prokka|OBHDJAFP_14)
  gnlProkkaOBHDJAFP_15 (original name was: gnl|Prokka|OBHDJAFP_15)

Compact view
gnlProkkaOBHDJAFP_3 - Region 1 - other
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 317,452 - 358,870 nt. (total: 41,419 nt) Show pHMM detection rules used
other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaOBHDJAFP_3 - Region 2 - sactipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 362,174 - 383,785 nt. (total: 21,612 nt) Show pHMM detection rules used
sactipeptide: (subtilosin or thuricin or TIGR04404 or Subtilosin_A or skfc)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Sactipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Sactipeptide predictions
Lists the possible core peptides for each biosynthetic enzyme. Each core peptide shows the leader and core peptide sequences.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Sactipeptide(s) for ctg3_368

ctg3_368
Leader:
MKKAVIVENK
Core:
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G

#### antiSMASH-DB 4.0 matches for ctg3_368

100.0% NC_000964.3 and 235 others:
NC_014479.1 Sactipeptides: BSUW23_RS18740_sactipeptide NC_014639.1 Sactipeptides: BATR1942_RS15950_sactipeptide NC_014976.1 Sactipeptides: BSN5_RS09700_sactipeptide NC_016047.1 Sactipeptides: GYO_RS41165_sactipeptide NC_017195.1 Sactipeptides: I33_RS18040_sactipeptide NC_017743.1 Sactipeptides: MY9_RS18920_sactipeptide NC_019896.1 Sactipeptides: A7A1_RS01935_sactipeptide NC_020244.1 Sactipeptides: C663_RS18295_sactipeptide NZ_BDDH01000003.1 Sactipeptides: A7P71_RS10610_sactipeptide NZ_CABIVP010000002.1 Sactipeptides: FY199_RS09010_sactipeptide NZ_CP007409.1 Sactipeptides: Q433_RS18950_sactipeptide NZ_CP009796.1 Sactipeptides: OB04_RS19085_sactipeptide NZ_CP011101.1 Sactipeptides: bslm_RS18365_sactipeptide NZ_CP011534.1 Sactipeptides: ABA10_RS18725_sactipeptide NZ_CP011802.1 Sactipeptides: D068_RS17505_sactipeptide NZ_CP016767.1 Sactipeptides: BCV50_RS14935_sactipeptide NZ_CP017072.1 Sactipeptides: BGM23_RS02945_sactipeptide NZ_CP017112.1 Sactipeptides: BS16045_RS19810_sactipeptide NZ_CP017313.1 Sactipeptides: BH660_RS14630_sactipeptide NZ_CP017314.1 Sactipeptides: BSBS38_RS19215_sactipeptide NZ_CP017676.1 Sactipeptides: BKN48_RS08085_sactipeptide NZ_CP018173.1 Sactipeptides: BAX60_RS03615_sactipeptide NZ_CP020367.1 Sactipeptides: BSK2_RS19060_sactipeptide NZ_CP020722.1 Sactipeptides: B7470_RS09560_sactipeptide NZ_CP020915.1 Sactipeptides: B9L64_RS11255_sactipeptide NZ_CP021169.1 Sactipeptides: B9N48_RS18685_sactipeptide NZ_CP021498.1 Sactipeptides: S101444_RS19170_sactipeptide NZ_CP021892.1 Sactipeptides: S100333_RS19720_sactipeptide NZ_CP021903.1 Sactipeptides: CD007_RS18975_sactipeptide NZ_CP021911.1 Sactipeptides: CDO84_RS18225_sactipeptide NZ_CP021921.1 Sactipeptides: S101392_RS19440_sactipeptide NZ_CP022391.1 Sactipeptides: CFK25_RS18875_sactipeptide NZ_CP022890.1 Sactipeptides: CJZ70_RS01210_sactipeptide NZ_CP023257.1 Sactipeptides: CLD04_RS19470_sactipeptide NZ_CP023409.1 Sactipeptides: Bateq7PJ16_RS20450_sactipeptide NZ_CP025941.1 Sactipeptides: C0W65_RS07300_sactipeptide NZ_CP026010.1 Sactipeptides: BS11774_RS03710_sactipeptide NZ_CP026030.1 Sactipeptides: C2H91_RS12110_sactipeptide NZ_CP026035.1 Sactipeptides: C2H96_RS13375_sactipeptide NZ_CP026036.1 Sactipeptides: C2H93_RS16885_sactipeptide NZ_CP026521.1 Sactipeptides: C1T29_RS22385_sactipeptide NZ_CP028201.1 Sactipeptides: C7M16_RS17535_sactipeptide NZ_CP028202.1 Sactipeptides: C7M17_RS17600_sactipeptide NZ_CP028217.1 Sactipeptides: C7M29_RS06900_sactipeptide NZ_CP028218.1 Sactipeptides: C7M30_RS12605_sactipeptide NZ_CP028812.1 Sactipeptides: DAE22_RS20770_sactipeptide NZ_CP029364.1 Sactipeptides: DIC78_RS12275_sactipeptide NZ_CP029461.1 Sactipeptides: DJ572_RS18795_sactipeptide NZ_CP029465.1 Sactipeptides: DKG76_RS19825_sactipeptide NZ_CP029609.1 Sactipeptides: DL538_RS20030_sactipeptide NZ_CP031675.1 Sactipeptides: DYS67_RS19275_sactipeptide NZ_CP031783.1 Sactipeptides: D0808_RS00710_sactipeptide NZ_CP031784.1 Sactipeptides: D0819_RS14700_sactipeptide NZ_CP032853.1 Sactipeptides: D9C10_RS17955_sactipeptide NZ_CP032855.1 Sactipeptides: D9C11_RS09165_sactipeptide NZ_CP035161.1 Sactipeptides: EQH88_RS19675_sactipeptide NZ_CP035167.1 Sactipeptides: EQJ08_RS19095_sactipeptide NZ_CP035226.1 Sactipeptides: EQW70_RS20085_sactipeptide NZ_CP035231.1 Sactipeptides: EQZ01_RS19685_sactipeptide NZ_CP035391.1 Sactipeptides: ES965_RS19370_sactipeptide NZ_CP035395.1 Sactipeptides: ES968_RS19740_sactipeptide NZ_CP035401.1 Sactipeptides: ETA19_RS19595_sactipeptide NZ_CP035402.1 Sactipeptides: ES969_RS19660_sactipeptide NZ_CP035403.1 Sactipeptides: ETA15_RS19805_sactipeptide NZ_CP035406.1 Sactipeptides: ETK61_RS20735_sactipeptide NZ_CP035413.1 Sactipeptides: ETL58_RS19505_sactipeptide NZ_CP039935.1 Sactipeptides: FCJ76_RS19255_sactipeptide NZ_CP045006.1 Sactipeptides: F9B13_RS01950_sactipeptide NZ_CP045425.1 Sactipeptides: GCU76_RS20710_sactipeptide NZ_CP045816.1 Sactipeptides: GII86_RS19920_sactipeptide NZ_CP045824.1 Sactipeptides: GII78_RS20125_sactipeptide NZ_CP046591.1 Sactipeptides: GO004_RS15965_sactipeptide NZ_CP046860.1 Sactipeptides: GPJ55_RS11605_sactipeptide NZ_CP047645.1 Sactipeptides: GSN02_RS19265_sactipeptide NZ_CP049924.1 Sactipeptides: G4G26_RS18960_sactipeptide NZ_CP050705.1 Sactipeptides: HCU65_RS18920_sactipeptide NZ_CP051462.1 Sactipeptides: HC662_RS19240_sactipeptide NZ_CP051464.1 Sactipeptides: HC660_RS18970_sactipeptide NZ_CP054050.1 Sactipeptides: HNV25_RS02005_sactipeptide NZ_CP054177.1 Sactipeptides: HR084_RS18935_sactipeptide NZ_CP054584.1 Sactipeptides: HT135_RS19775_sactipeptide NZ_CP060193.1 Sactipeptides: H7F27_RS02180_sactipeptide NZ_CP060417.1 Sactipeptides: H8S71_RS18495_sactipeptide NZ_CP061284.1 Sactipeptides: ICJ61_RS19715_sactipeptide NZ_CP061870.1 Sactipeptides: IE382_RS22305_sactipeptide NZ_CP062497.1 Sactipeptides: IHV08_RS19770_sactipeptide NZ_CP063276.1 Sactipeptides: IM743_RS18070_sactipeptide NZ_CP065858.1 Sactipeptides: I7X10_RS03370_sactipeptide NZ_CP069789.1 Sactipeptides: JR441_RS19085_sactipeptide NZ_CP070483.1 Sactipeptides: JQX68_RS19175_sactipeptide NZ_CP070976.1 Sactipeptides: JYG31_RS19675_sactipeptide NZ_CP071043.1 Sactipeptides: JS609_RS19245_sactipeptide NZ_CP073265.1 Sactipeptides: KCX77_RS18900_sactipeptide NZ_CP075344.1 Sactipeptides: KIL00_RS20100_sactipeptide NZ_CP076083.1 Sactipeptides: KFF76_RS18635_sactipeptide NZ_CP079759.1 Sactipeptides: KXZ66_RS19695_sactipeptide NZ_CP080508.1 Sactipeptides: K0V03_RS08595_sactipeptide NZ_CP089148.1 Sactipeptides: LRO88_RS20980_sactipeptide NZ_CP090125.1 Sactipeptides: LXE94_RS19505_sactipeptide NZ_CP093289.1 Sactipeptides: MNG38_RS19730_sactipeptide NZ_CP093546.1 Sactipeptides: MOW04_RS19180_sactipeptide NZ_CP095736.1 Sactipeptides: MX663_RS20090_sactipeptide NZ_CP096590.1 Sactipeptides: M0696_RS18995_sactipeptide NZ_CP096889.1 Sactipeptides: EFK13_RS19225_sactipeptide NZ_CP098738.1 Sactipeptides: NDR85_RS18965_sactipeptide NZ_CP100651.1 Sactipeptides: NLW79_RS19990_sactipeptide NZ_CP100752.1 Sactipeptides: NLV76_RS19060_sactipeptide NZ_CP101718.1 Sactipeptides: NPA28_RS19075_sactipeptide NZ_CP101936.1 Sactipeptides: NP434_RS18980_sactipeptide NZ_CP103352.1 Sactipeptides: NX823_RS19780_sactipeptide NZ_CP104878.1 Sactipeptides: N8A75_RS20105_sactipeptide NZ_CP107539.1 Sactipeptides: OEG95_RS19105_sactipeptide NZ_CP110264.1 Sactipeptides: OMK57_RS18975_sactipeptide NZ_CP114899.1 Sactipeptides: O6U12_RS19480_sactipeptide NZ_CP116773.1 Sactipeptides: PNF29_RS01990_sactipeptide NZ_FTMW01000001.1 Sactipeptides: BW968_RS02045_sactipeptide NZ_JAAUXF010000005.1 Sactipeptides: HC742_RS19325_sactipeptide NZ_JABRUZ010000003.1 Sactipeptides: HRF55_RS03085_sactipeptide NZ_JABRVH010000018.1 Sactipeptides: HRF53_RS09100_sactipeptide NZ_JABUKD010000002.1 Sactipeptides: HRW04_RS09345_sactipeptide NZ_JAEACL010000001.1 Sactipeptides: I5F14_RS00800_sactipeptide NZ_JAHVOC010000002.1 Sactipeptides: KXD37_RS07830_sactipeptide NZ_JAJFDG010000003.1 Sactipeptides: LJF29_RS11575_sactipeptide NZ_JAJHUI010000011.1 Sactipeptides: LK399_RS16325_sactipeptide NZ_JALAJC010000012.1 Sactipeptides: MOB18_RS16080_sactipeptide NZ_JALAKW010000005.1 Sactipeptides: MOB93_RS12665_sactipeptide NZ_JALAKZ010000001.1 Sactipeptides: MOB76_RS02240_sactipeptide NZ_JALALA010000011.1 Sactipeptides: MOB82_RS15020_sactipeptide NZ_JALALE010000020.1 Sactipeptides: MOB33_RS20855_sactipeptide NZ_JALALO010000006.1 Sactipeptides: MOB75_RS09230_sactipeptide NZ_JALAMD010000002.1 Sactipeptides: MOB22_RS02315_sactipeptide NZ_JALAME010000005.1 Sactipeptides: MOC02_RS13805_sactipeptide NZ_JALAMJ010000012.1 Sactipeptides: MOB80_RS16635_sactipeptide NZ_JALAMO010000007.1 Sactipeptides: MOB98_RS08535_sactipeptide NZ_JALAMR010000019.1 Sactipeptides: MOC09_RS17975_sactipeptide NZ_JALAMZ010000002.1 Sactipeptides: MOC43_RS01370_sactipeptide NZ_JALANN010000012.1 Sactipeptides: MOC49_RS18290_sactipeptide NZ_JALANX010000001.1 Sactipeptides: MOC25_RS03365_sactipeptide NZ_JALAPT010000001.1 Sactipeptides: MOC95_RS01580_sactipeptide NZ_JALAPV010000005.1 Sactipeptides: MOC91_RS13515_sactipeptide NZ_JALAPW010000003.1 Sactipeptides: MOD18_RS06235_sactipeptide NZ_JALAPX010000003.1 Sactipeptides: MOC97_RS06805_sactipeptide NZ_JALAPZ010000002.1 Sactipeptides: MOC81_RS03830_sactipeptide NZ_JALAQA010000008.1 Sactipeptides: MOD07_RS14955_sactipeptide NZ_JALAQC010000001.1 Sactipeptides: MOD00_RS01290_sactipeptide NZ_JALAQD010000002.1 Sactipeptides: MOD08_RS05770_sactipeptide NZ_JALAQE010000002.1 Sactipeptides: MOD19_RS04725_sactipeptide NZ_JALASB010000002.1 Sactipeptides: MOD42_RS03685_sactipeptide NZ_JALASC010000024.1 Sactipeptides: MOD69_RS20580_sactipeptide NZ_JALASM010000006.1 Sactipeptides: MOD51_RS10970_sactipeptide NZ_JALASR010000006.1 Sactipeptides: MOD87_RS10780_sactipeptide NZ_JALAST010000011.1 Sactipeptides: MOE17_RS14670_sactipeptide NZ_JALASW010000005.1 Sactipeptides: MOE15_RS06925_sactipeptide NZ_JALATC010000001.1 Sactipeptides: MOD56_RS03380_sactipeptide NZ_JALATD010000001.1 Sactipeptides: MOE02_RS03350_sactipeptide NZ_JALATE010000006.1 Sactipeptides: MOD98_RS11440_sactipeptide NZ_JALATF010000003.1 Sactipeptides: MOD44_RS09960_sactipeptide NZ_JALATG010000002.1 Sactipeptides: MOE16_RS03490_sactipeptide NZ_JALATJ010000007.1 Sactipeptides: MOD90_RS15770_sactipeptide NZ_JALATU010000001.1 Sactipeptides: MOE27_RS01985_sactipeptide NZ_JALATV010000005.1 Sactipeptides: MOD97_RS07020_sactipeptide NZ_JALAUA010000008.1 Sactipeptides: MOD32_RS16030_sactipeptide NZ_JALAUD010000001.1 Sactipeptides: MOE28_RS03345_sactipeptide NZ_JALAUJ010000006.1 Sactipeptides: MOE37_RS12685_sactipeptide NZ_JALAUK010000012.1 Sactipeptides: MOE38_RS11825_sactipeptide NZ_JALAUV010000003.1 Sactipeptides: MOE71_RS06545_sactipeptide NZ_JALAUW010000015.1 Sactipeptides: MOE83_RS13210_sactipeptide NZ_JALAVA010000002.1 Sactipeptides: MOE81_RS02625_sactipeptide NZ_JALAVE010000001.1 Sactipeptides: MOE67_RS03645_sactipeptide NZ_JALAVI010000011.1 Sactipeptides: MOE80_RS14660_sactipeptide NZ_JALAVK010000006.1 Sactipeptides: MOE96_RS10120_sactipeptide NZ_JALAVL010000002.1 Sactipeptides: MOE60_RS03290_sactipeptide NZ_JALAVM010000009.1 Sactipeptides: MOE49_RS16195_sactipeptide NZ_JALAVO010000008.1 Sactipeptides: MOE63_RS14665_sactipeptide NZ_JALAVQ010000003.1 Sactipeptides: MOE59_RS02420_sactipeptide NZ_JALAVS010000002.1 Sactipeptides: MOE46_RS02250_sactipeptide NZ_JALAVT010000005.1 Sactipeptides: MOF25_RS08325_sactipeptide NZ_JALAVU010000004.1 Sactipeptides: MOE78_RS09660_sactipeptide NZ_JALAVV010000004.1 Sactipeptides: MOE66_RS02855_sactipeptide NZ_JALAVW010000001.1 Sactipeptides: MOE86_RS01005_sactipeptide NZ_JALAVX010000009.1 Sactipeptides: MOE40_RS07525_sactipeptide NZ_JALAVZ010000002.1 Sactipeptides: MOF00_RS02525_sactipeptide NZ_JALAWB010000008.1 Sactipeptides: MOE87_RS15020_sactipeptide NZ_JALAWK010000002.1 Sactipeptides: MOF06_RS12140_sactipeptide NZ_JALAWW010000010.1 Sactipeptides: MOF23_RS17300_sactipeptide NZ_JALAXQ010000012.1 Sactipeptides: MOF24_RS14120_sactipeptide NZ_JALAXV010000001.1 Sactipeptides: MOF15_RS00375_sactipeptide NZ_JALAYA010000016.1 Sactipeptides: MOF34_RS08915_sactipeptide NZ_JALAYD010000019.1 Sactipeptides: MOF39_RS20725_sactipeptide NZ_JALNTO010000006.1 Sactipeptides: MTN95_RS11045_sactipeptide NZ_JAMDFN010000008.1 Sactipeptides: M3M31_RS18245_sactipeptide NZ_JAMYDW010000003.1 Sactipeptides: NHM07_RS10830_sactipeptide NZ_JANBMP010000002.1 Sactipeptides: NL430_RS07940_sactipeptide NZ_JANDGG010000001.1 Sactipeptides: NKU38_RS03365_sactipeptide NZ_JANFAP010000001.1 Sactipeptides: NEC81_RS02065_sactipeptide NZ_JAQFFE010000015.1 Sactipeptides: PG051_RS13540_sactipeptide NZ_JAQOXM010000001.1 Sactipeptides: PO770_RS01950_sactipeptide NZ_JH600279.1 Sactipeptides: GYU_RS0104160_sactipeptide NZ_JXHL01000020.1 Sactipeptides: B4069_RS07025_sactipeptide NZ_JXHP01000031.1 Sactipeptides: B4073_RS09425_sactipeptide NZ_JXHR01000010.1 Sactipeptides: B4146_RS06925_sactipeptide NZ_KZ848487.1 Sactipeptides: DSL71_RS14015_sactipeptide NZ_LPVE01000021.1 Sactipeptides: AU385_RS06600_sactipeptide NZ_LSBB01000001.1 Sactipeptides: AXI57_RS01770_sactipeptide NZ_LUUT01000004.1 Sactipeptides: A6751_RS18460_sactipeptide NZ_MOEO01000004.1 Sactipeptides: BLL41_RS09830_sactipeptide NZ_MUXL01000002.1 Sactipeptides: B0W20_RS08845_sactipeptide NZ_MZZI01000001.1 Sactipeptides: B2G85_RS18515_sactipeptide NZ_NBBO01000003.1 Sactipeptides: B6K89_RS01830_sactipeptide NZ_NERK01000024.1 Sactipeptides: B9T64_RS18540_sactipeptide NZ_NJRD01000003.1 Sactipeptides: CE053_RS09115_sactipeptide NZ_NJRE01000002.1 Sactipeptides: CE047_RS07205_sactipeptide NZ_NKAK01000003.1 Sactipeptides: CE489_RS10400_sactipeptide NZ_NMOM01000004.1 Sactipeptides: CFI07_RS07245_sactipeptide NZ_PHIE01000002.1 Sactipeptides: CVV77_RS10760_sactipeptide NZ_PJCT01000002.1 Sactipeptides: CW370_RS11825_sactipeptide NZ_PVQM01000002.1 Sactipeptides: C6W22_RS11490_sactipeptide NZ_PVQN01000002.1 Sactipeptides: C6W23_RS05885_sactipeptide NZ_PVRK01000001.1 Sactipeptides: C6350_RS02025_sactipeptide NZ_PVWC01000004.1 Sactipeptides: C6372_RS11675_sactipeptide NZ_QRFZ01000012.1 Sactipeptides: DXT72_RS19010_sactipeptide NZ_SDKE01000003.1 Sactipeptides: EUA35_RS12130_sactipeptide NZ_SHOB01000002.1 Sactipeptides: ES060_RS14270_sactipeptide NZ_SIRN01000006.1 Sactipeptides: EYH65_RS15720_sactipeptide NZ_SNWK01000001.1 Sactipeptides: DFO69_RS02055_sactipeptide NZ_SOBO01000012.1 Sactipeptides: DFO78_RS18210_sactipeptide NZ_SORJ01000001.1 Sactipeptides: BJ795_RS03350_sactipeptide NZ_VBRP01000025.1 Sactipeptides: FE220_RS07065_sactipeptide NZ_VFNF01000001.1 Sactipeptides: FB592_RS03405_sactipeptide NZ_VIOH01000001.1 Sactipeptides: FLN47_RS01935_sactipeptide NZ_VLJK01000012.1 Sactipeptides: L605_RS10195_sactipeptide NZ_VLJL01000006.1 Sactipeptides: L604_RS05585_sactipeptide NZ_VLJX01000001.1 Sactipeptides: L609_RS01950_sactipeptide NZ_VTEK01000003.1 Sactipeptides: FZC71_RS10310_sactipeptide NZ_WTKJ01000004.1 Sactipeptides: NWT17_RS06185_sactipeptide
Sactipeptides: BSU_37350_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
97.0% NZ_CP092751.1: Sactipeptides: MKF32_RS18515_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C A T C S I G A C L V D G P I P D F E I A G A T G L F G L W G
1
G C A T C S I G A V C L V D G P I P D F E I A G A T G L F G L W G
33
93.9% NZ_CP048852.1: Sactipeptides: G4P54_RS19300_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C A T C S I G A C L V D G P I P D F E+A G A T G L F G L W G
1
G C A T C S I G A V C L V D G P I P D F E V A G A T G L F G L W G
33
with 15 more sequence matches
90.9% NZ_JALAKO010000018.1 and 1 other:
NZ_JALAOG010000035.1 Sactipeptides: MOC96_RS18415_sactipeptide
Sactipeptides: MOB26_RS11095_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C A T C S I G A C L V D G P I P D F E I G T G L F G L W G
1
G C A T C S I G A V C L V D G P I P D F E I G G V T G L F G L W G
33
87.9% NZ_CP026362.1 and 3 others:
NZ_CP033052.1 Sactipeptides: D9779_RS19215_sactipeptide NZ_JALAPG010000031.1 Sactipeptides: MOC70_RS13155_sactipeptide NZ_JALAQI010000016.1 Sactipeptides: MOD13_RS11485_sactipeptide
Sactipeptides: BV11031_RS20865_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C A T C S I G A C L V D G I P D F E I G T G L F G L W G
1
G C A T C S I G A V C L V D G F I P D F E I G G V T G L F G L W G
33
78.8% NZ_NXEM01000021.1: Sactipeptides: CPT06_RS05595_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C T C S I G A C L V+G P I P D F+ G T G L F G L W G
1
G C T T C S I G A V C L V N G P I P D F K T G G V T G L F G L W G
33
72.7% NC_014925.1 and 17 others:
NZ_ANOI01000001.1 Sactipeptides: F779_RS13290_sactipeptide NZ_CP031604.1 Sactipeptides: DNJ55_RS07055_sactipeptide NZ_CP031605.1 Sactipeptides: DRC71_RS00165_sactipeptide NZ_CP035741.1 Sactipeptides: EW136_RS01865_sactipeptide NZ_CP039747.1 Sactipeptides: EFT29_RS00935_sactipeptide NZ_CP054206.2 Sactipeptides: HP560_RS11995_sactipeptide NZ_CP060700.1 Sactipeptides: H9Q12_RS10940_sactipeptide NZ_CP065920.1 Sactipeptides: JC281_RS11580_sactipeptide NZ_CP076465.1 Sactipeptides: KDE16_RS00560_sactipeptide NZ_JANPRJ010000013.1 Sactipeptides: NVR03_RS10250_sactipeptide NZ_JANPRN010000039.1 Sactipeptides: NVR04_RS07875_sactipeptide NZ_JTKO01000012.1 Sactipeptides: NO87_RS10650_sactipeptide NZ_LR134267.1 Sactipeptides: EL085_RS11430_sactipeptide NZ_MQMO01000006.1 Sactipeptides: BSR38_RS07375_sactipeptide NZ_MQNF01000024.1 Sactipeptides: BSR36_RS12515_sactipeptide NZ_QQPJ01000025.1 Sactipeptides: DV949_RS11300_sactipeptide NZ_SEZW01000001.1 Sactipeptides: EWV33_RS08610_sactipeptide
Sactipeptides: SPSINT_RS00615_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+T C S I G A A C L+D G P+P D F E+ G T G+F G L
1
G C S T C S I G A A C L I D G P L P D F E V M G I T G I F G L
31
69.7% NZ_CP027770.1: Sactipeptides: C7J90_RS04260_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+ C S I G A A C L+D G P P D F E+ G T G F G L
1
G C S A C S I G A A C L I D G P F P D F E V M G I T G T F G L
31
69.7% NZ_CP066885.1: Sactipeptides: JGZ27_RS11325_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+T C S I G A C L+D G P+P D F E+ G T G+F G L
1
G C S T C S I G V A C L I D G P L P D F E V M G I T G I F G L
31
69.7% NZ_CP094808.1 and 3 others:
NZ_CP094809.1 Sactipeptides: MUA95_RS01320_sactipeptide NZ_CP094813.1 Sactipeptides: MUA84_RS01300_sactipeptide NZ_VKCY01000004.1 Sactipeptides: FNK43_RS05155_sactipeptide
Sactipeptides: MUA11_RS01375_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+ C+I G A A C L D G P I P D F E+A G T G F G+
1
G C S A C A I G A A C L A D G P I P D F E V A G I T G T F G I
31
66.7% NZ_ATDF02000020.1 and 1 other:
NZ_KV827785.1 Sactipeptides: HMPREF2580_RS10900_sactipeptide
Sactipeptides: M462_RS08950_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+ C++G A A C L D G P I P D F E+A G T G F G+
1
G C S A C A V G A A C L A D G P I P D F E V A G I T G T F G M
31
63.6% NC_022584.1 and 2 others:
NZ_CP047883.1 Sactipeptides: M594_RS05585_sactipeptide NZ_KV802690.1 Sactipeptides: HMPREF2764_RS03300_sactipeptide
Sactipeptides: N596_RS03165_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C+ C+I G A C L D G P I P D F E I A G + +F +G
1
G C S V C A I G A V C L A D G P I P D F E I A G V S A V F T A F G
33
63.6% NZ_CP063367.1 and 1 other:
NZ_LR134263.1 Sactipeptides: EL101_RS12790_sactipeptide
Sactipeptides: IPU22_RS12430_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L
31
G C+ C++G A C L D G P I P D F E+A G T G F G+
1
G C S A C A V G A V C L A D G P I P D F E V A G I T G T F G I
31
60.6% NZ_LGRV01000006.1: Sactipeptides: AEA09_RS16245_sactipeptide
1
G C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W G
33
G C+ C S I G A C L+ G P+P D F E+A +G+F +W G
1
G C S A C S I G A I C L I T G P V P D F E V A S I S G I F S V W G
33
54.5% NZ_CP066713.1: Sactipeptides: JGZ50_RS11620_sactipeptide
2
C A T C S I G A A C L V D G P I P D F E I A G A T G L F
29
C+T C S I G A A C L+D G P+P D F G F
1
C S T C S I G A A C L I D G P L P D F R S H G N Y W N F
28
42.4% NZ_PIZD01000012.1: Sactipeptides: allorf_25390_25524_sactipeptide
2
C A T C S I G A A C L V D G P I P D F E I A G A T G L F G L W
32
C+ C++G A C L D G P P D E+ G + G +
3
C S F C A V G A G C L A D G P F P D A E V V G V A L I A G A F
33
18.2% NZ_CP016898.1: Lassopeptides: BEN76_RS17395_lassopeptide
14
D G P I P D F E I A G A T G L F
29
G P+P++ + G G F
3
K G P L P E Y F L M G G G G N F
18
17.1% NC_017030.1: Lanthipeptides: allorf_07530736_07530897_lanthipeptide
1
G C A T C S I G A A C L V D G P I
17
G +I C V D G P+
11
G V L R P A I A R P C F V D G P V
27
Sactipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists its RODEO score and predicted core sequence.

ctg3_368
  Putative sactipeptide
  RODEO score: 33.0
  Core sequence, approximate: GCATCSIGAACLVDGPIPDFEIAGATGLFGLWG

gnlProkkaOBHDJAFP_3 - Region 3 - CDPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 611,265 - 632,011 nt. (total: 20,747 nt) Show pHMM detection rules used
CDPS: (CDPS or cycdipepsynth)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
NRPS/PKS substrates
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

gnlProkkaOBHDJAFP_3 - Region 4 - lanthipeptide-class-i
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 761,294 - 787,519 nt. (total: 26,226 nt) Show pHMM detection rules used
lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lanthipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Lanthipeptide predictions
Shows the possible core peptides for each biosynthetic enzyme.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Lanthipeptide(s) for ctg3_750

ctg3_753
Leader:
MSKFDDFDLDVVKVSKQDSKITPQ
Core:
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
Core with dehydrations:
W K Dha E Dha L Cys Dhb P G Cys V Dhb G V L Q Dhb Cys F L Q Dhb I Dhb Cys N Cys K I Dha K

#### MIBiG 3.1 matches for ctg3_753

50.0% BGC0000535 (ADJ56352.1): Lanthipeptide: nisin A
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G L C ++T T C+C I
3
S I S L C T P G C K T G A L M G C N M K T A T C H C S I
30

#### antiSMASH-DB 4.0 matches for ctg3_753

100.0% NZ_CP021903.1 and 20 others:
NZ_CP023409.1 Lanthipeptides: Bateq7PJ16_RS18530_lanthipeptide NZ_CP026036.1 Lanthipeptides: C2H93_RS15000_lanthipeptide NZ_CP028218.1 Lanthipeptides: C7M30_RS14555_lanthipeptide NZ_CP035167.1 Lanthipeptides: EQJ08_RS17140_lanthipeptide NZ_CP035226.1 Lanthipeptides: EQW70_RS18175_lanthipeptide NZ_CP045006.1 Lanthipeptides: F9B13_RS03875_lanthipeptide NZ_CP076083.1 Lanthipeptides: KFF76_RS16710_lanthipeptide NZ_CP079759.1 Lanthipeptides: KXZ66_RS17780_lanthipeptide NZ_CP080508.1 Lanthipeptides: K0V03_RS06525_lanthipeptide NZ_CP089148.1 Lanthipeptides: LRO88_RS19055_lanthipeptide NZ_JALAUA010000003.1 Lanthipeptides: MOD32_RS04985_lanthipeptide NZ_JALAVX010000009.1 Lanthipeptides: MOE40_RS09385_lanthipeptide NZ_JAMYDW010000007.1 Lanthipeptides: NHM07_RS16180_lanthipeptide NZ_JAQOXM010000001.1 Lanthipeptides: PO770_RS03875_lanthipeptide NZ_NJRD01000003.1 Lanthipeptides: CE053_RS07200_lanthipeptide NZ_NJRE01000008.1 Lanthipeptides: CE047_RS18435_lanthipeptide NZ_SORJ01000001.1 Lanthipeptides: BJ795_RS01490_lanthipeptide NZ_VFNF01000001.1 Lanthipeptides: FB592_RS01525_lanthipeptide NZ_VIOH01000001.1 Lanthipeptides: FLN47_RS03850_lanthipeptide NZ_VLJL01000012.1 Lanthipeptides: L604_RS09425_lanthipeptide
Lanthipeptides: CD007_RS17065_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
93.8% NC_014479.1 and 9 others:
NZ_CP026362.1 Lanthipeptides: BV11031_RS00400_lanthipeptide NZ_CP033052.1 Lanthipeptides: D9779_RS17315_lanthipeptide NZ_CP051464.1 Lanthipeptides: HC660_RS17030_lanthipeptide NZ_JALAKK010000002.1 Lanthipeptides: MOB09_RS02800_lanthipeptide NZ_JALAKO010000014.1 Lanthipeptides: MOB26_RS08535_lanthipeptide NZ_JALAOG010000003.1 Lanthipeptides: MOC96_RS02500_lanthipeptide NZ_JALAPG010000043.1 Lanthipeptides: MOC70_RS16815_lanthipeptide NZ_JALAQI010000009.1 Lanthipeptides: MOD13_RS06065_lanthipeptide NZ_NXEM01000027.1 Lanthipeptides: CPT06_RS15285_lanthipeptide
Lanthipeptides: BSUW23_RS16845_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S E S L C T P G C V T G L Q T C F L Q T+T C N C K I S K
1
W K S E S L C T P G C V T G A L Q T C F L Q T L T C N C K I S K
32
93.8% NC_016047.1 and 2 others:
NZ_KZ848487.1 Lanthipeptides: DSL71_RS15965_lanthipeptide NZ_MUXL01000003.1 Lanthipeptides: B0W20_RS12275_lanthipeptide
Lanthipeptides: GYO_RS39160_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S E S+C T P G C V T G+L Q T C F L Q T I T C N C K I S K
1
W K S E S V C T P G C V T G L L Q T C F L Q T I T C N C K I S K
32
with 88 more sequence matches
93.8% NZ_CP025079.1 and 3 others:
NZ_CP047644.1 Lanthipeptides: GNE05_RS17275_lanthipeptide NZ_CP099859.1 Lanthipeptides: NIZ95_RS16280_lanthipeptide NZ_CP101621.1 Lanthipeptides: NN913_RS16115_lanthipeptide
Lanthipeptides: BVQ_RS17705_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S E S+C T P G C V T G V L Q T C F L Q T I T C N C I S K
1
W K S E S V C T P G C V T G V L Q T C F L Q T I T C N C H I S K
32
84.4% NZ_BMMB01000002.1: Lanthipeptides: IEX62_RS05935_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S+S C T P G C V T G V L Q T C F+Q T T C N C I S K
1
W K S K S F C T P G C V T G V L Q T C F I Q T A T C N C H I S K
32
84.4% NZ_CP117416.1 and 1 other:
NZ_JAQQZQ010000001.1 Lanthipeptides: PO903_RS06885_lanthipeptide
Lanthipeptides: PQ456_RS01230_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S+S C T P G C V T G V L Q T C F+Q T T C N C I S K
1
W K S Q S F C T P G C V T G V L Q T C F I Q T A T C N C H I S K
32
62.5% NZ_AUAQ01000012.1: Lanthipeptides: G393_RS16160_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
W K S+S L C T P G C+T G+L Q T C +Q+ T C +S+
1
W K S K S L C T P G C I T G I L Q T C A I Q S F T C E V H V S R
32
60.6% NZ_CP015405.2 and 7 others:
NZ_CP015405.2 Lanthipeptides: A4V09_RS08295_lanthipeptide NZ_CP015405.2 Lanthipeptides: A4V09_RS08290_lanthipeptide NZ_CP015405.2 Lanthipeptides: A4V09_RS08285_lanthipeptide NZ_CP053228.1 Lanthipeptides: HL650_RS06240_lanthipeptide NZ_CP053228.1 Lanthipeptides: HL650_RS06235_lanthipeptide NZ_CP053228.1 Lanthipeptides: HL650_RS06230_lanthipeptide NZ_CP053228.1 Lanthipeptides: HL650_RS06225_lanthipeptide
Lanthipeptides: A4V09_RS08300_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S+S L C T P G C V T G+L T C +Q T T C C+I+
3
S K S L C T P G C V T G I L M T C P V Q T A T C G C Q I T
31
60.0% NZ_CP013655.1 and 2 others:
NZ_CP013655.1 Lanthipeptides: ATZ35_RS03635_lanthipeptide NZ_CP013655.1 Lanthipeptides: ATZ35_RS03630_lanthipeptide
Lanthipeptides: ATZ35_RS03640_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S+S L C T P G C V T G V L C L+T I T C N C +
3
S K S L C T P G C V T G V L M G C A L K T I T C N C S V G
31
58.8% NZ_JADNFO010000025.1: Lanthipeptides: I2C89_RS09745_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G V L C L+T T C N C I
3
S Y S L C T P G C K T G V L M A C H L K T A T C N C S I
30
57.6% NZ_JADNJR010000016.1 and 2 others:
NZ_JADNJR010000016.1 Lanthipeptides: I2E58_RS10875_lanthipeptide NZ_QSHK01000002.1 Lanthipeptides: DW860_RS04740_lanthipeptide
Lanthipeptides: I2E58_RS10880_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
+K S+S C T P G C T G+L T C L+T T C C I+
1
Y K S K S A C T P G C P T G I L M T C P L K T A T C G C H I T
31
57.6% NZ_QSHK01000002.1 and 1 other:
NZ_QSHK01000002.1 Lanthipeptides: DW860_RS04730_lanthipeptide
Lanthipeptides: DW860_RS04735_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
+K S+S+C T P G C T G+L T C L+T T C C I+
1
Y K S K S V C T P G C P T G I L M T C P L K T A T C G C H I T
31
54.3% NZ_FNDP01000013.1: Lanthipeptides: BLP54_RS11230_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S+S L C T P G C V T G V L C +T T C N C +
5
S K S L C T P G C V T G V L M G C N N K T A T C N C S V
32
53.1% NC_015600.1 and 14 others:
NZ_AP020310.1 Lanthipeptides: SAGCMC97051_RS07300_lanthipeptide NZ_ATVP01000001.1 Lanthipeptides: G574_RS11150_lanthipeptide NZ_BCFB01000042.1 Lanthipeptides: GOZ36_RS07980_lanthipeptide NZ_CP068708.1 Lanthipeptides: JM964_RS04040_lanthipeptide NZ_CP116958.1 Lanthipeptides: M0P28_RS07755_lanthipeptide NZ_CP116958.1 Lanthipeptides: M0P28_RS07755_lanthipeptide NZ_FIKS01000005.1 Lanthipeptides: A0525_RS10015_lanthipeptide NZ_GL636070.1 Lanthipeptides: HMPREF9171_RS106200_lanthipeptide NZ_JADPLU010000018.1 Lanthipeptides: I4V82_RS09545_lanthipeptide NZ_JAKVIE010000017.1 Lanthipeptides: MK857_RS08340_lanthipeptide NZ_JAQDQV010000001.1 Lanthipeptides: PGO74_RS00635_lanthipeptide NZ_JAQDQV010000001.1 Lanthipeptides: PGO74_RS00635_lanthipeptide NZ_LR594050.1 Lanthipeptides: FGL20_RS03485_lanthipeptide NZ_SSXN01000004.1 Lanthipeptides: FAJ36_RS04715_lanthipeptide
Lanthipeptides: SGPB_RS10680_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S+S L C T P G C T G+L T C ++T T C C
3
S K S L C T P G C K T G I L M T C A I K T A T C G C H F G
31
53.1% NZ_AULX01000006.1 and 1 other:
NZ_LT732548.1 Lanthipeptides: CZ379_RS19505_lanthipeptide
Lanthipeptides: H583_RS0100280_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S+S L C T P G C+T G V L C F + C+I S
3
S K S L C T P G C I T G V L M-C F T K----G C E I S H
27
53.1% NZ_CP024974.1 and 1 other:
NZ_JAIMDQ010000006.1 Lanthipeptides: K6V44_RS04045_lanthipeptide
Lanthipeptides: CVO91_RS06555_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G+L T C ++T T C C
3
S I S L C T P G C K T G I L M T C A I K T A T C G C H F
30
53.1% NZ_CP059471.1 and 3 others:
NZ_FNZW01000001.1 Lanthipeptides: BMZ61_RS02110_lanthipeptide NZ_FOYC01000001.1 Lanthipeptides: BMZ88_RS03370_lanthipeptide NZ_KE384124.1 Lanthipeptides: G597_RS0106700_lanthipeptide
Lanthipeptides: H1R75_RS06635_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S+S L C T P G C T G L T C ++T T C C
3
S K S L C T P G C K T G A L M T C P I K T A T C G C H F G N
32
53.1% NZ_JAMDIB010000004.1: Lanthipeptides: M5P35_RS04030_lanthipeptide
3
S E S L C T P-G C V T G V L Q T C F L Q T I T C N C K I S
31
S+S L C T P G C T G+L T C ++T T C C
3
S K S L C T P P G C K T G I L M T C A I K T A T C G C H F G
32
52.9% NC_013656.1 and 20 others:
NC_020450.1 Lanthipeptides: LILO_RS03015_lanthipeptide NZ_CP009472.1 Lanthipeptides: LG36_RS03420_lanthipeptide NZ_CP010050.1 Lanthipeptides: QI18_RS03300_lanthipeptide NZ_CP015903.1 Lanthipeptides: LLUC08_RS03255_lanthipeptide NZ_CP024954.1 Lanthipeptides: CV702_RS02990_lanthipeptide NZ_CP066300.1 Lanthipeptides: LacL0098_RS03205_lanthipeptide NZ_CP098790.1 Lanthipeptides: M5C73_RS03405_lanthipeptide NZ_JAALEQ010000006.1 Lanthipeptides: HFD15_RS10120_lanthipeptide NZ_JAJONJ010000005.1 Lanthipeptides: LSG16_RS07195_lanthipeptide NZ_JAQDWM010000007.1 Lanthipeptides: PGU01_RS08180_lanthipeptide NZ_JAQDXV010000018.1 Lanthipeptides: PGT80_RS11850_lanthipeptide NZ_JAQDYA010000007.1 Lanthipeptides: PGT72_RS09560_lanthipeptide NZ_JAQDYA010000007.1 Lanthipeptides: PGT72_RS09560_lanthipeptide NZ_JAQEIZ010000019.1 Lanthipeptides: PGX18_RS12025_lanthipeptide NZ_JAQEOU010000022.1 Lanthipeptides: PGV42_RS12330_lanthipeptide NZ_JAQEOV010000015.1 Lanthipeptides: PGW09_RS10765_lanthipeptide NZ_MTJP01000006.1 Lanthipeptides: BW151_RS03795_lanthipeptide NZ_MTJR01000005.1 Lanthipeptides: BW153_RS02980_lanthipeptide NZ_MTJS01000002.1 Lanthipeptides: BW154_RS09850_lanthipeptide NZ_RAGL01000022.1 Lanthipeptides: D6108_RS11395_lanthipeptide
Lanthipeptides: LLKF_RS13210_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G L C ++T T C N C I
3
S I S L C T P G C K T G A L M G C N M K T A T C N C S I
30
51.5% NZ_FNDP01000013.1 and 1 other:
NZ_FNDP01000013.1 Lanthipeptides: BLP54_RS11220_lanthipeptide
Lanthipeptides: BLP54_RS11225_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S+S L C T P G C V T G+L C + T C N C +
3
S K S L C T P G C V T G L L M G C A G S S A T C N C S V
30
51.4% NZ_CP113114.1 and 1 other:
NZ_FZDV01000015.1 Lanthipeptides: CFW84_RS08635_lanthipeptide
Lanthipeptides: OTU45_RS07045_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N
27
S S L C T P G C V T G V L C T I+C N
3
S V S L C T P G C V T G V L M-C P G N T I S C N
26
50.0% NC_022237.1 and 1 other:
NZ_JUZI01000019.1 Lanthipeptides: ADI02_RS09325_lanthipeptide
Lanthipeptides: SII_RS05025_lanthipeptide
6
L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
+C T P G C V T G L C L Q T T C N C +
6
M C T P G C V T G A L M G C N L Q T A T C N C H V
30
50.0% NZ_CP009913.1 and 1 other:
NZ_CP009913.1 Lanthipeptides: SSAL8618_RS00810_lanthipeptide
Lanthipeptides: SSAL8618_RS00815_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C+T G V L C +Q+I C N +
3
S Y S L C T P G C I T G V L M G C H I Q S I G C N V H V
30
50.0% NZ_CP065984.1 and 2 others:
NZ_CP095737.1 Lanthipeptides: MXM90_RS03205_lanthipeptide NZ_JAQDXJ010000021.1 Lanthipeptides: PGU19_RS11740_lanthipeptide
Lanthipeptides: I6I21_RS02785_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G L C ++T T C+C I
3
S I S L C T P G C K T G A L M G C N M K T A T C H C S I
30
50.0% NZ_CP086322.1: Lanthipeptides: K9S39_RS23570_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S S L C T P G C V T C T C I S K
3
S V S L C T P G C V T A A--G C T T A K C T Q G C H I S K
30
48.5% NC_009328.1 and 6 others:
NZ_CP014140.1 Lanthipeptides: ACH33_RS18880_lanthipeptide NZ_CP014749.1 Lanthipeptides: A0V43_RS19510_lanthipeptide NZ_CP014749.1 Lanthipeptides: A0V43_RS19510_lanthipeptide NZ_CP017690.1 Lanthipeptides: GTID1_RS08690_lanthipeptide NZ_CP017694.1 Lanthipeptides: GD3902_RS07590_lanthipeptide NZ_PIJH01000004.1 Lanthipeptides: CV632_RS11810_lanthipeptide
Lanthipeptides: GTNG_RS18005_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T--I T C N
27
S+S L C T P G C+T G V L C Q ++C N
3
S K S L C T P G C I T G V L M-C L T Q N S C V S C N
28
47.1% NZ_JALGRO010000002.1: Lanthipeptides: MT346_RS01980_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S S L C T P G C T G C F T C I S
3
S F S L C T P G C P T G G F A-C F T A A C T G G C T I S S
31
47.1% NZ_LR793265.1: Lanthipeptides: HV392_RS09830_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C+T G V L C Q+ C N +
3
S Y S L C T P G C I T G V L M G C Q F Q S A G C N V H V
30
47.1% NZ_SNVW01000005.1: Lanthipeptides: EDF64_RS09155_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S S L C T P G C T G C F T C I S
3
S V S L C T P G C P T G G F A-C F T A A C T G G C T I S S
31
46.9% NZ_CP025079.1 and 2 others:
NZ_CP047644.1 Lanthipeptides: GNE05_RS17285_lanthipeptide NZ_CP099859.1 Lanthipeptides: NIZ95_RS16290_lanthipeptide
Lanthipeptides: BVQ_RS17715_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L
21
S+S L C T P G C+T G L Q T C+L
3
S K S L C T P G C I T G P L Q T C Y L
21
46.9% NZ_NDXL01000003.1: Lanthipeptides: B7024_RS31125_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S S L C T P G C V T C T C +S K
3
S W S L C T P G C V T A A--G C T T S V C T Q G C H V S K
30
45.7% NZ_JALDTZ010000003.1: Lanthipeptides: M1F37_RS03135_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N
27
S S C T P G C V T G+L C T I+C N
3
S R S F C T P G C V T G I L M-C P G N T I S C N
26
45.5% NC_006510.1 and 5 others:
NZ_CP018058.1 Lanthipeptides: GT3921_RS18655_lanthipeptide NZ_CP023704.1 Lanthipeptides: CQJ30_RS18315_lanthipeptide NZ_CP025074.1 Lanthipeptides: CWI35_RS08795_lanthipeptide NZ_CP027303.2 Lanthipeptides: C1N76_RS05790_lanthipeptide NZ_CP038860.1 Lanthipeptides: E5Z46_RS04660_lanthipeptide
Lanthipeptides: GK_RS18085_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T--I T C N
27
S+S L C T P G C+T G+L C Q ++C N
3
S K S L C T P G C I T G I L M-C L T Q N S C V S C N
28
45.0% NZ_NHVL01000013.1 and 1 other:
NZ_NHVL01000013.1 Lanthipeptides: CEU70_RS16825_lanthipeptide
Lanthipeptides: CEU70_RS16830_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S+S L C T P G C T G+L Q T C +++ T C C I
5
S K S L C T P G C K T G I L Q T C A I K S A T C G C S I
32
44.1% NZ_CP090412.1 and 3 others:
NZ_QSTB01000004.1 Lanthipeptides: DXC22_RS03785_lanthipeptide NZ_VSTZ01000009.1 Lanthipeptides: FYK98_RS07445_lanthipeptide NZ_VSTZ01000009.1 Lanthipeptides: FYK98_RS07445_lanthipeptide
Lanthipeptides: LZF92_RS09890_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G L C ++T +C C +
3
S Y S L C T P G C K T G A L M G C T M K T A S C G C H V
30
44.1% NZ_FBTD01000003.1: Lanthipeptides: PB1E_RS03075_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C T G L C ++T +C C +
3
S V S L C T P G C K T G A L M G C N M K T A S C G C H V
30
44.1% NZ_KE951497.1: Lanthipeptides: allorf_8519_8683_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S+ L C T P G C T G + C F T C I S
3
S K F L C T P G C P T G G I A-C F T T Q C T N G C S I S
30
44.1% NZ_LR793265.1: Lanthipeptides: HV392_RS09825_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I
30
S S L C T P G C+T G L C Q+ C N +
3
S Y S L C T P G C I T G R L M G C Q F Q S A G C N V H V
30
43.8% NZ_CP034587.1: Lanthipeptides: EKH77_RS16870_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S S L C T P G C + C T C I S K
3
S I S L C T P G C P S A A--G C T T S V C T Q G C H I S K
30
43.8% NZ_CP101621.1: Lanthipeptides: NN913_RS16125_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L
21
S+S L C T P G C+T G L+T C L
3
S K S L C T P G C I T G A L R T C T L
21
43.8% NZ_CP116604.1 and 2 others:
NZ_JAFFHI010000008.1 Lanthipeptides: JN541_RS08535_lanthipeptide NZ_JAFFHJ010000004.1 Lanthipeptides: JN542_RS06245_lanthipeptide
Lanthipeptides: PHA78_RS04905_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F-L Q T I T C N C K
29
S S L C T G C+T G + C T++C N C
3
S I S L C T A G C I T G R I M G C H K T P T V S C N C H
30
43.8% NZ_JAQEAZ010000004.1: Lanthipeptides: PGT18_RS05860_lanthipeptide
4
E S L C T P G C V T G V L Q T C F L Q T-I T C N C K I
30
S C T P C T G L C +T +T C C K+
4
H S F C T P N C P T G F L--C P P K T Q L T C T C K L
29
42.4% NZ_CP085954.1: Lanthipeptides: LK411_RS13585_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q
22
S+S L C T P G C T G L C F Q
3
S K S L C T P G C P T G A L G-C F T Q
21
41.2% NC_021022.1 and 2 others:
NC_021022.1 Lanthipeptides: CK5_RS17320_lanthipeptide NZ_JADNJR010000016.1 Lanthipeptides: I2E58_RS10870_lanthipeptide
Lanthipeptides: CK5_RS17320_lanthipeptide
4
E S L C T P G C V T G V L Q T C F L Q T-I T C N C K I
30
S C T P C+T G L C +T +T C C K+
6
H S F C T P N C L T G F L--C P P K T Q L T C T C K L
31
41.0% NZ_AP019008.1 and 1 other:
NZ_BDDX01000012.1 Lanthipeptides: FF306_RS05510_lanthipeptide
Lanthipeptides: FF306_RS00060_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S L C T P G C+T G L C +T T C+C S
3
S Y V L C T P G C I T G R L M G C N N K T K T C H C H S S N
32
41.0% NZ_JXCW01000008.1: Lanthipeptides: RZ55_RS07215_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S K
32
S L C T P G C+T G L C +T T C+C S
3
S Y V L C T P G C I T G R L M G C N N K T K T C H C H S S H
32
40.6% NZ_CP013655.1: Lanthipeptides: ATZ35_RS03625_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N
27
S S L C T G C Q L Q T+ C N
3
S V S L C T M G C-----Q G S K L Q T V I C N
22
40.6% NZ_CP113914.1: Lanthipeptides: allorf_1411802_1411978_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S S L C T P G C +G C F T C
3
S H S L C T P G C P S G G F-A C F S T Q C T N G C H F G
30
40.6% NZ_FNDP01000013.1: Lanthipeptides: BLP54_RS11235_lanthipeptide
1
W K S E S L C T P G C V T G V L Q T C
19
+K S S L C T P G C T G+L C
1
F K S I S L C T P G C P T G I L M G C
19
40.6% NZ_WTWY01000020.1: Lanthipeptides: GQY55_RS27090_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
S +C T P C+T G L N C K I S
1
S G F I C T P S C L T G T L----------N C K I S
19
37.5% NZ_JAIFIS010000001.1: Lanthipeptides: K1X09_RS26315_lanthipeptide
6
L C T P G C V T G V L Q T C F L Q T I T C N C K I S
31
+C T P C+T G L N C K I S
4
I C T P S C L T G T L----------N C K I S
19
34.4% NZ_CP023477.1: Lanthipeptides: CO204_RS07210_lanthipeptide
1
W K S E S L C T P G C V-T G V L Q T
18
+K S S L C T P G C T G +
1
F K S W S L C T P G C A R T G S F N S
19
31.2% NZ_CP015405.2 and 1 other:
NZ_CP053228.1 Lanthipeptides: HL650_RS06245_lanthipeptide
Lanthipeptides: A4V09_RS08280_lanthipeptide
3
S E S L C T P G C V T G V L Q T C
19
S S L C T G C T T C
3
S I S L C T S G C K T A F F G T C
19
31.2% NZ_GG667191.1 and 1 other:
NZ_GG667191.1 Lanthipeptides: HMPREF0298_RS11685_lanthipeptide
Lanthipeptides: HMPREF0298_RS11685_lanthipeptide
3
S E S L C T P G C V T G
14
S+S L C T P G C+T G
3
S K S L C T P G C I T G
14
31.2% NZ_JHXK01000032.1 and 1 other:
NZ_JHXK01000032.1 Lanthipeptides: T483_RS30515_lanthipeptide
Lanthipeptides: T483_RS30515_lanthipeptide
3
S E S L C T P G C V T G V L Q T C F L Q T
23
S S C T P G C T + +T C ++
3
S Y S A C T P G C A T S L F R T C L T R S
23
29.4% NZ_CABIWO010000014.1: Lanthipeptides: FY209_RS17155_lanthipeptide
3
S E S L C T P G C V T G V L
16
S + C T P G C V T G L
2
S V A Y C T P G C V T G Q L
15
29.3% NZ_QOCT01000001.1: Lanthipeptides: DS833_RS00365_lanthipeptide
3
S E S L C T P G C V T G V L Q T C
19
S+S L C T P G C+T G L C
3
S K S L C T P G C I T G R L M G C
19
28.1% NZ_CP013023.1: Lanthipeptides: allorf_0505345_0505512_lanthipeptide
2
K S E S L C T P G C
11
K S+S L C T P G C
2
K S K S L C T P G C
11
28.1% NZ_CP033068.1: Lanthipeptides: EAG11_RS21865_lanthipeptide
11
C V T G V L Q T C F L Q T I T C N C K
29
C T G +C T C N C K
3
C K T G S S S S C H-S T A V C N C K
20
28.1% NZ_CP086149.1 and 13 others:
NZ_CP086149.1 Lanthipeptides: LL127_RS22600_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22595_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22590_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22585_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22580_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22575_lanthipeptide NZ_CP086149.1 Lanthipeptides: LL127_RS22570_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23225_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23220_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23215_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23210_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23205_lanthipeptide NZ_CP087100.1 Lanthipeptides: LOR37_RS23200_lanthipeptide
Lanthipeptides: LL127_RS22605_lanthipeptide
5
S L C T P G C V T G V L Q T C
19
S L C T G C+T G + C
2
S L C T A G C I T G R I M G C
16
25.7% NZ_CP075910.1 and 3 others:
NZ_CP075971.1 Lanthipeptides: KLF29_RS14850_lanthipeptide NZ_CP075982.1 Lanthipeptides: KLF51_RS14900_lanthipeptide NZ_CP075994.1 Lanthipeptides: KLF26_RS16110_lanthipeptide
Lanthipeptides: KLF45_RS14835_lanthipeptide
3
S E S L C T P G C V T G V L
16
S + C T P G C+T G L
3
S V A Y C T P G C L T G E L
16
25.0% NC_003923.1 and 11 others:
NC_009641.1 Lanthipeptides: NWMN_RS09635_lanthipeptide NZ_CP023076.1 Lanthipeptides: CJ017_RS08945_lanthipeptide NZ_CP047792.1 Lanthipeptides: E3S88_RS07345_lanthipeptide NZ_CP054876.1 Lanthipeptides: HUW54_RS09150_lanthipeptide NZ_CP077098.1 Lanthipeptides: KSF82_RS09475_lanthipeptide NZ_CP092781.1 Lanthipeptides: ML436_RS08940_lanthipeptide NZ_CP102959.1 Lanthipeptides: NW979_RS08780_lanthipeptide NZ_CP102962.1 Lanthipeptides: NW971_RS09555_lanthipeptide NZ_JAGSAY010000004.1 Lanthipeptides: KC186_RS06745_lanthipeptide NZ_LR133917.1 Lanthipeptides: ELZ45_RS09155_lanthipeptide NZ_LS483317.1 Lanthipeptides: DQL75_RS09700_lanthipeptide
Lanthipeptides: MW_RS09420_lanthipeptide
3
S E S L C T P G C V
12
S S L C T P G C
4
S H S L C T P G C A
13
25.0% NC_014023.1 and 43 others:
NC_014023.1 Lanthipeptides: BMQ_RS27575_lanthipeptide NZ_CP018875.1 Lanthipeptides: BUW91_RS26425_lanthipeptide NZ_CP018875.1 Lanthipeptides: BUW91_RS26420_lanthipeptide NZ_CP028091.1 Lanthipeptides: C1N54_RS28075_lanthipeptide NZ_CP028091.1 Lanthipeptides: C1N54_RS28070_lanthipeptide NZ_CP028091.1 Lanthipeptides: C1N54_RS28065_lanthipeptide NZ_CP031776.1 Lanthipeptides: D0441_RS30140_lanthipeptide NZ_CP041065.1 Lanthipeptides: FJM50_RS01185_lanthipeptide NZ_CP041065.1 Lanthipeptides: FJM50_RS01180_lanthipeptide NZ_CP041065.1 Lanthipeptides: FJM50_RS01175_lanthipeptide NZ_CP048884.1 Lanthipeptides: BMG_RS27510_lanthipeptide NZ_CP058263.1 Lanthipeptides: HW576_RS26980_lanthipeptide NZ_CP058263.1 Lanthipeptides: HW576_RS26975_lanthipeptide NZ_CP058263.1 Lanthipeptides: HW576_RS26970_lanthipeptide NZ_CP085427.1 Lanthipeptides: LIT30_RS26985_lanthipeptide NZ_CP085427.1 Lanthipeptides: LIT30_RS26980_lanthipeptide NZ_CP085427.1 Lanthipeptides: LIT30_RS26975_lanthipeptide NZ_CP085432.1 Lanthipeptides: LIT34_RS27820_lanthipeptide NZ_CP085432.1 Lanthipeptides: LIT34_RS27815_lanthipeptide NZ_CP085432.1 Lanthipeptides: LIT34_RS27810_lanthipeptide NZ_FNNQ01000006.1 Lanthipeptides: BLV90_RS07690_lanthipeptide NZ_FNNQ01000006.1 Lanthipeptides: BLV90_RS07685_lanthipeptide NZ_FNNQ01000006.1 Lanthipeptides: BLV90_RS07680_lanthipeptide NZ_FPAA01000016.1 Lanthipeptides: CHX35_RS16000_lanthipeptide NZ_FPAA01000016.1 Lanthipeptides: CHX35_RS15995_lanthipeptide NZ_FPAA01000016.1 Lanthipeptides: CHX35_RS15990_lanthipeptide NZ_FPAA01000016.1 Lanthipeptides: CHX35_RS15985_lanthipeptide NZ_JACJHT010000009.1 Lanthipeptides: HNP21_RS25635_lanthipeptide NZ_JACJHT010000009.1 Lanthipeptides: HNP21_RS25630_lanthipeptide NZ_JACJHT010000009.1 Lanthipeptides: HNP21_RS25625_lanthipeptide NZ_JAHHYI010000015.1 Lanthipeptides: KM925_RS26245_lanthipeptide NZ_JANIOE010000010.1 Lanthipeptides: NQ109_RS28075_lanthipeptide NZ_JANIOE010000010.1 Lanthipeptides: NQ109_RS28070_lanthipeptide NZ_JANIOE010000010.1 Lanthipeptides: NQ109_RS28065_lanthipeptide NZ_NKAQ01000005.1 Lanthipeptides: CE057_RS19640_lanthipeptide NZ_NKAQ01000005.1 Lanthipeptides: CE057_RS19635_lanthipeptide NZ_NTZG01000054.1 Lanthipeptides: CN510_RS18265_lanthipeptide NZ_NUIN01000020.1 Lanthipeptides: CN973_RS26930_lanthipeptide NZ_NUOI01000090.1 Lanthipeptides: COE08_RS30285_lanthipeptide NZ_NUOI01000090.1 Lanthipeptides: COE08_RS30280_lanthipeptide NZ_NUOQ01000009.1 Lanthipeptides: COE31_RS05925_lanthipeptide NZ_NUXL01000007.1 Lanthipeptides: COJ36_RS20885_lanthipeptide NZ_NUZS01000089.1 Lanthipeptides: COJ90_RS28785_lanthipeptide
Lanthipeptides: BMQ_RS27580_lanthipeptide
3
S E S L C T P G C
11
S S L C T P G C
3
S V S L C T P G C
11
25.0% NZ_AP019791.1: Lanthipeptides: RxyAA322_RS06460_lanthipeptide
3
S E S L C T P G C V
12
S S L C T P G C
3
S Y S L C T P G C A
12
25.0% NZ_AP023356.1 and 1 other:
NZ_FMZZ01000002.1 Lanthipeptides: BLS56_RS30480_lanthipeptide
Lanthipeptides: Aiant_RS23765_lanthipeptide
3
S E S L C T P G C V T
13
S S L C T P G C +
3
S V S L C T P G C T S
13
25.0% NZ_AP025343.1: Lanthipeptides: allorf_1820803_1820973_lanthipeptide
2
K S E S L C T P G C
11
S+S L C T P G C
2
D S K S L C T P G C
11
25.0% NZ_AXWW01000016.1 and 2 others:
NZ_CP071248.1 Lanthipeptides: BLI009_RS04985_lanthipeptide NZ_JAMTCO010000009.1 Lanthipeptides: LV75_RS20160_lanthipeptide
Lanthipeptides: H504_RS39505_lanthipeptide
3
S E S L C T P G C V T
13
S S L C T P G C +
3
S I S L C T P G C T S
13
25.0% NZ_CP029370.1 and 2 others:
NZ_JAFJXZ010000017.1 Lanthipeptides: JYU28_RS14110_lanthipeptide NZ_JAOYTP010000003.1 Lanthipeptides: OIU26_RS10605_lanthipeptide
Lanthipeptides: DI243_RS22305_lanthipeptide
10
G C V T G V L Q T C F L Q T I T C N C
28
G V T + C+ +T C N C
4
G T V T C A V S A C Y D T Y V T C N C
22
25.0% NZ_KI866523.1: Lanthipeptides: MPTA5024_RS39835_lanthipeptide
3
S E S L C T P G C V T
13
S S L C T P G C +
3
S W S L C T P G C T S
13
25.0% NZ_QGTF01000010.1: Lanthipeptides: BDW27_RS18560_lanthipeptide
3
S E S L C T P G C V T G V L Q T
18
S S+C T P G C G +
3
S V S V C T P G C E N G T F N S
18
25.0% NZ_QSHK01000002.1: Lanthipeptides: DW860_RS04745_lanthipeptide
3
S E S L C T P G C V T G V L Q
17
S+S L C T C T G +
3
S K S L C T S S C E T G F F K
17
25.0% NZ_VKCY01000012.1: Lanthipeptides: FNK43_RS09020_lanthipeptide
3
S E S L C T P G C V
12
S S L C T P G C
5
S F S L C T P G C A
14
22.9% NZ_CP029639.1 and 1 other:
NZ_QLLI01000019.1 Lanthipeptides: DET54_RS28075_lanthipeptide
Lanthipeptides: DMB88_RS07755_lanthipeptide
3
S E S L C T P G C V T G
14
S + C T P G C T G
3
S V A Y C T P G C N T G
14
22.9% NZ_CP034141.1: Lanthipeptides: EGM68_RS08790_lanthipeptide
1
W K S E S L C T P G C V T G
14
+ S S C T G C+T G
1
Y T S W S Y C T T G C I T G
14
22.9% NZ_CP070896.1 and 2 others:
NZ_CP070896.1 Lanthipeptides: JWH23_RS09310_lanthipeptide NZ_CP070896.1 Lanthipeptides: JWH23_RS09310_lanthipeptide
Lanthipeptides: JWH23_RS09310_lanthipeptide
2
K S E S L C T P G C V T G
14
S + C T P G C+T G
2
A S V A Y C T P G C L T G
14
21.9% NC_006582.1 and 6 others:
NZ_BOQQ01000001.1 Lanthipeptides: KI354_RS00530_lanthipeptide NZ_BOQS01000001.1 Lanthipeptides: KI364_RS00675_lanthipeptide NZ_CP019985.1 Lanthipeptides: BC8716_RS09795_lanthipeptide NZ_CP104963.1 Lanthipeptides: N7M99_RS07725_lanthipeptide NZ_FRBS01000002.1 Lanthipeptides: BUC05_RS08990_lanthipeptide NZ_JAODPB010000001.1 Lanthipeptides: N6H06_RS03040_lanthipeptide
Lanthipeptides: ABC_RS22115_lanthipeptide
1
W K S E S L C T P G C
11
+ S S C T P G C
1
F T S V S F C T P G C
11
21.9% NC_014483.2 and 30 others:
NC_014622.2 Lanthipeptides: PPSC2_RS36205_lanthipeptide NC_017542.1 Lanthipeptides: PPM_RS07465_lanthipeptide NC_023037.2 Lanthipeptides: X809_RS07820_lanthipeptide NZ_CP006872.1 Lanthipeptides: PPSQR21_RS07740_lanthipeptide NZ_CP017967.2 Lanthipeptides: PPYC1_RS07755_lanthipeptide NZ_CP017968.3 Lanthipeptides: PPYC2_RS08330_lanthipeptide NZ_CP023711.1 Lanthipeptides: CPY53_RS22235_lanthipeptide NZ_CP025957.1 Lanthipeptides: C1A50_RS07530_lanthipeptide NZ_CP029370.1 Lanthipeptides: DI243_RS07495_lanthipeptide NZ_CP040829.1 Lanthipeptides: FGY93_RS00500_lanthipeptide NZ_CP049598.1 Lanthipeptides: G7L40_RS00115_lanthipeptide NZ_CP061172.1 Lanthipeptides: IAQ67_RS07480_lanthipeptide NZ_CP073682.1 Lanthipeptides: KAI36_RS07745_lanthipeptide NZ_CP073683.1 Lanthipeptides: KAI37_RS07495_lanthipeptide NZ_CP084033.1 Lanthipeptides: LAZ93_RS07550_lanthipeptide NZ_CP085682.1 Lanthipeptides: LJR53_RS07370_lanthipeptide NZ_CP086373.1 Lanthipeptides: LMH85_RS07780_lanthipeptide NZ_CP092779.1 Lanthipeptides: MJ749_RS07440_lanthipeptide NZ_CP097766.1 Lanthipeptides: MF620_RS07485_lanthipeptide NZ_CP102865.1 Lanthipeptides: NWS42_RS21195_lanthipeptide NZ_CP109848.1 Lanthipeptides: OF859_RS22650_lanthipeptide NZ_CP113973.1 Lanthipeptides: OYT09_RS07785_lanthipeptide NZ_FOYG01000001.1 Lanthipeptides: BM358_RS03525_lanthipeptide NZ_JAAMNR010000001.1 Lanthipeptides: G9G54_RS03500_lanthipeptide NZ_JAKVDC010000001.1 Lanthipeptides: MKN04_RS02755_lanthipeptide NZ_JWJJ01000002.1 Lanthipeptides: U707_RS10390_lanthipeptide NZ_PNXQ01000013.1 Lanthipeptides: C1I60_RS14430_lanthipeptide NZ_POVS01000009.1 Lanthipeptides: C1T21_RS10630_lanthipeptide NZ_POVT01000009.1 Lanthipeptides: C1T20_RS05900_lanthipeptide NZ_PTJM01000020.1 Lanthipeptides: C5G87_RS02825_lanthipeptide
Lanthipeptides: PPE_RS07020_lanthipeptide
6
L C T P G C V T G V L Q
17
+C T P C T G L
4
I C T P S C A T G T L N
15
21.9% NZ_CP020040.1: Lanthipeptides: allorf_294666_294851_lanthipeptide
2
K S E S L C T P G C V T G V L Q T C
19
+ E+ P G G L Q C
11
Q G E A P L G P G G F E G S L Q H C
28
21.9% NZ_CP094805.1: Lanthipeptides: MUA37_RS13310_lanthipeptide
3
S E S L C T P G C V
12
S+ L C T P G C
3
S K F L C T P G C A
12
21.9% NZ_JADDUE010000020.1 and 1 other:
NZ_LIVZ01000011.1 Lanthipeptides: AMK31_RS29125_lanthipeptide
Lanthipeptides: INP57_RS28495_lanthipeptide
3
S E S L C T P G C V T
13
S S C T P G C +
3
S V S Y C T P G C T S
13
21.9% NZ_LELK01000004.1: Lanthipeptides: AB986_RS12540_lanthipeptide
3
S E S L C T P G C
11
S S C T P G C
3
S Y S F C T P G C
11
21.9% NZ_NIST01000001.1: Lanthipeptides: CD001_RS09870_lanthipeptide
5
S L C T P G C V T G V L Q
17
+C T P C+T G L
3
G I C T P S C L T G T L N
15
20.0% NZ_CP073683.1 and 1 other:
NZ_CP092779.1 Lanthipeptides: MJ749_RS08075_lanthipeptide
Lanthipeptides: KAI37_RS08180_lanthipeptide
7
C T P G C V T G
14
C T P G C+T G
7
C T P G C I T G
14
18.8% NZ_CP029370.1: Lanthipeptides: DI243_RS07485_lanthipeptide
6
L C T P G C V T G V L Q
17
+C T P C+T +L
4
I C T P T C L T S I L N
15
18.8% NZ_CP059572.1: Lanthipeptides: AGRA3207_RS17530_lanthipeptide
3
S E S L C T P G C V T
13
S ++C T P G C +
3
S H A V C T P G C T S
13
18.8% NZ_CP090942.1: Lanthipeptides: LZT96_RS12010_lanthipeptide
3
S E S L C T P G C V
12
S+ +C T P G C
3
S K F I C T P G C A
12
18.8% NZ_CP096658.1: Lanthipeptides: allorf_3178073_3178228_lanthipeptide
4
E S L C T P G C V T G V
15
E S C+P C T
3
E S Y C S P K C Q T A A
14
18.8% NZ_FNNQ01000013.1: Lanthipeptides: BLV90_RS16000_lanthipeptide
6
L C T P G C V T G V L Q T
18
+C T P G C G ++
2
I C T P G C D E G T F E S
14
18.8% NZ_ML974127.1: Lanthipeptides: allorf_1546009_1546125_lanthipeptide
3
S E S L C T P G C V T G V
15
E S C+P C T
1
D E S Y C S P K C Q T A A
13
14.3% NZ_QJTF01000024.1: Lanthipeptides: allorf_35736_35903_lanthipeptide
3
S E S L C T P G C V T G
14
+ +L C+ G C T G
11
N N A L C S D G C S T G
22
13.5% NZ_FWXM01000003.1: Lanthipeptides: B8967_RS11230_lanthipeptide
7
C T P G C V T G V L Q T C F L Q T I T C N C
28
C+ G C++ + T L N C
24
C S D G C L S N F M H T H V L N C S K A N C
45

#### Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine
Lanthipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of lanthionine bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.

ctg3_753 - Class I
  Cleavage pHMM score: 27.80
  RODEO score: 29
  Monoisotopic mass: 3346.7 Da
  Molecular weight: 3349.0 Da
  Number of bridges: 5
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    3367.0 Da N = 1
    3385.0 Da N = 2
    3403.0 Da N = 3

gnlProkkaOBHDJAFP_3 - Region 5 - NRP-metallophore,NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 931,650 - 983,427 nt. (total: 51,778 nt) Show pHMM detection rules used
NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 5, location 931649 - 983427:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (Gly - Thr)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg3_935: diOH-Bz
  Search NORINE for peptide: strict or relaxed
  AMP-binding (31..435): diOH-Bz
  nrpys: diOH-Bz
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
    Large clusters prediction:
      Hydroxy-benzoic acid derivates (diOH-Bz, Sal)
    Small clusters prediction:
      Hydroxy-benzoic acid derivates (diOH-Bz, Sal)
    Single AA prediction:
      dhb (diOH-Bz)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      PLPAQGVVNK
    Nearest Stachelhaus code(s):
      diOH-Bz PLPAQGVVNK (100% 8Å match)
      diOH-Bz or Sal PLPAQGVVNK (94% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg3_937: Gly - Thr
  Search NORINE for peptide: strict or relaxed
  AMP-binding (463..861): Gly
  nrpys: Gly
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
    Single AA prediction:
      gly (Gly)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DILQLGLIWK
    Nearest Stachelhaus code(s):
      Gly DILQLGLIWK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1519..1935): Thr
  nrpys: Thr
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)
    Small clusters prediction:
      thr (Thr)
    Single AA prediction:
      thr (Thr)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DFWNIGMVHK
    Nearest Stachelhaus code(s):
      Thr DFWNIGMVHK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)

gnlProkkaOBHDJAFP_5 - Region 1 - NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 24,930 nt. (total: 24,930 nt) Show pHMM detection rules used
Region on contig edge.
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 0 - 24930:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (D-Orn) + (Tyr - D-Thr) + (Glu - D-Val) + (Pro)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg5_1: Orn
  Search NORINE for peptide: strict or relaxed
  AMP-binding (157..562): Orn
  nrpys: Orn
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
    Large clusters prediction:
      Long positively charged side chain (Orn, Lys, Arg)
    Small clusters prediction:
      Orn and hydroxy-Orn specific (Orn, OH-Orn)
    Single AA prediction:
      orn (Orn)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVGEIGSIDK
    Nearest Stachelhaus code(s):
      Orn DVGEIGSIDK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg5_2: Tyr - Thr
  Search NORINE for peptide: strict or relaxed
  AMP-binding (477..868): Tyr
  nrpys: Tyr
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
    Large clusters prediction:
      Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
    Small clusters prediction:
      Polar aromatic ring (Tyr, bOH-Tyr)
    Single AA prediction:
      tyr (Tyr)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DGTITAEVAK
    Nearest Stachelhaus code(s):
      Tyr DGTITAEVAK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1508..1906): Thr
  nrpys: Thr
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Aliphatic chain or phenyl group with -OH (Ser, Thr, Dhpg, Hpg)
    Small clusters prediction:
      thr (Thr)
    Single AA prediction:
      thr (Thr)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DFWNIGMVHK
    Nearest Stachelhaus code(s):
      Thr DFWNIGMVHK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg5_3: Glu - Val
  Search NORINE for peptide: strict or relaxed
  AMP-binding (485..886): Glu
  nrpys: Glu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
    Large clusters prediction:
      Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
    Small clusters prediction:
      glu,gln (Glu, Gln)
    Single AA prediction:
      glu (Glu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAWHFGGVDK
    Nearest Stachelhaus code(s):
      Glu DAWHFGGVDK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1526..1919): Val
  nrpys: Val
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      val (Val)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVFWIGGTFK
    Nearest Stachelhaus code(s):
      Val DVFWIGGTFK (100% 8Å match)
      Ala or Val DVFWIGGTFK (91% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg5_4: Pro - Glu
  Search NORINE for peptide: strict or relaxed
  AMP-binding (475..872): Pro
  nrpys: Pro
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Cyclic aliphatic chain (polar NH2 group) (Pro, Hpr)
    Small clusters prediction:
      pro (Pro)
    Single AA prediction:
      pro (Pro)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVQFIAHVVK
    Nearest Stachelhaus code(s):
      Pro DVQFIAHVVK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1506..1907): Glu
  nrpys: Glu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
    Large clusters prediction:
      Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
    Small clusters prediction:
      glu,gln (Glu, Gln)
    Single AA prediction:
      glu (Glu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAWHFGSVEK
    Nearest Stachelhaus code(s):
      Glu DAWHFGSVEK (100% 8Å match)
      Gln DAWHFGSVEK (94% 8Å match)
    Stachelhaus code match:
      100% (strong)

gnlProkkaOBHDJAFP_8 - Region 1 - NRPS,betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 27,546 nt. (total: 27,546 nt) Show pHMM detection rules used
Region on contig edge.
NRPS: cds(Condensation and (AMP-binding or A-OX))
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 0 - 27546:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (D-Tyr) + (Ile)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg8_1: Tyr
  Search NORINE for peptide: strict or relaxed
  AMP-binding (167..561): Tyr
  nrpys: Tyr
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aromatic (Phe, Tyr, diOH-Bz, Ph-Gly, bOH-Tyr)
    Large clusters prediction:
      Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
    Small clusters prediction:
      Polar aromatic ring (Tyr, bOH-Tyr)
    Single AA prediction:
      tyr (Tyr)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DGTITAEVAK
    Nearest Stachelhaus code(s):
      Tyr DGTITAEVAK (97% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg8_2: Ile
  Search NORINE for peptide: strict or relaxed
  AMP-binding (474..867): Ile
  nrpys: Ile
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      ile (Ile)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAFFYGITFK
    Nearest Stachelhaus code(s):
      Ile DAFFYGITFK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg8_7: X
  AMP-binding (13..445): X
  nrpys: Asp, Asn, Glu, Gln, Aad
  SVM prediction details:
    Predicted physicochemical class:
      N/A
    Large clusters prediction:
      Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
    Small clusters prediction:
      N/A
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      -GLHIAAPVK
    Nearest Stachelhaus code(s):
      Z-ahmohOrn FGLHIASTCK (56% 8Å match)
      Ile DGLFIGIPVK (32% 8Å match)
    Stachelhaus code match:
      60% (weak)

gnlProkkaOBHDJAFP_9 - Region 1 - NRPS,PKS-like,T3PKS,transAT-PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 5,266 - 120,017 nt. (total: 114,752 nt) Show pHMM detection rules used
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
NRPS: cds(Condensation and (AMP-binding or A-OX))
T3PKS: cds(Condensation and (AMP-binding or A-OX))
PKS-like: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 5265 - 120017:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (Gly - ccmal - ohmal - mal) + (ccmal - mal - ohmal - mal) + (Me-ccmal - ohmal - mal) + (Ala - ccmal - ccmal - Me-ccmal) + (mal - mal)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg9_30: Ala
  Search NORINE for peptide: strict or relaxed
  AMP-binding (497..905): Ala
  nrpys: Ala
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      N/A
    Small clusters prediction:
      N/A
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVSNMAIIYK
    Nearest Stachelhaus code(s):
      Ala DVSNMAIIYK (91% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg9_33: pk - Gly
  Search NORINE for peptide: strict or relaxed
  CAL_domain (60..471): pk
  minowa: fatty_acid
  Prediction, score:
    fatty_acid: 10.9
    NH2: 10.3
    shikimic_acid: 0.0
    Acetyl-CoA: 0.0
    AHBA: 0.0
  AMP-binding (1159..1554): Gly
  nrpys: Gly
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
    Single AA prediction:
      gly (Gly)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DILQLGMIWK
    Nearest Stachelhaus code(s):
      Gly DILQLGMIWK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg9_39: mal
  PKS_AT (4..288): mal
  ATSignature: Malonyl-CoA
  Top 3 matches:
    Malonyl-CoA: 87.5%
    inactive: 66.7%
  minowa: Malonyl-CoA
  Prediction, score:
    Malonyl-CoA: 96.2
    inactive: 40.7
    Methoxymalonyl-CoA: 29.2
    Methylmalonyl-CoA: 22.2
    Propionyl-CoA: 16.2
    trans-1,2-CPDA: 0.0
    fatty_acid: 0.0
    Isobutyryl-CoA: 0.0
    Ethylmalonyl-CoA: 0.0
    CHC-CoA: 0.0
    Benzoyl-CoA: 0.0
    Acetyl-CoA: 0.0
    3-Methylbutyryl-CoA: 0.0
    2-Methylbutyryl-CoA: 0.0
ctg9_40: pk
  PKS_AT (7..293): pk
  ATSignature: (unknown)
  No matches above 50%
  minowa: inactive
  Prediction, score:
    inactive: 27.3
    Malonyl-CoA: 24.5
    Isobutyryl-CoA: 8.5
    Benzoyl-CoA: 8.4
    trans-1,2-CPDA: 0.0
    fatty_acid: 0.0
    Propionyl-CoA: 0.0
    Methylmalonyl-CoA: 0.0
    Methoxymalonyl-CoA: 0.0
    Ethylmalonyl-CoA: 0.0
    CHC-CoA: 0.0
    Acetyl-CoA: 0.0
    3-Methylbutyryl-CoA: 0.0
    2-Methylbutyryl-CoA: 0.0
ctg9_42: mal
  PKS_AT (4..284): mal
  ATSignature: Malonyl-CoA
  Top 3 matches:
    Malonyl-CoA: 87.5%
    inactive: 62.5%
  minowa: Malonyl-CoA
  Prediction, score:
    Malonyl-CoA: 101.4
    Methoxymalonyl-CoA: 55.6
    inactive: 37.8
    Methylmalonyl-CoA: 37.1
    Propionyl-CoA: 24.9
    Ethylmalonyl-CoA: 10.8
    2-Methylbutyryl-CoA: 9.4
    trans-1,2-CPDA: 0.0
    fatty_acid: 0.0
    Isobutyryl-CoA: 0.0
    CHC-CoA: 0.0
    Benzoyl-CoA: 0.0
    Acetyl-CoA: 0.0
    3-Methylbutyryl-CoA: 0.0

gnlProkkaOBHDJAFP_10 - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 796,843 - 837,940 nt. (total: 41,098 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaOBHDJAFP_10 - Region 2 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 885,677 - 907,575 nt. (total: 21,899 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaOBHDJAFP_10 - Region 3 - NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 979,044 - 1,000,657 nt. (total: 21,614 nt) Show pHMM detection rules used
Region on contig edge.
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaOBHDJAFP_11 - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 92,459 - 113,262 nt. (total: 20,804 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaOBHDJAFP_13 - Region 1 - NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 195,113 - 260,504 nt. (total: 65,392 nt) Show pHMM detection rules used
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 195112 - 260504:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (Glu - Leu - D-Leu) + (Val - Asp - D-Leu) + (Leu)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg13_226: Leu
  Search NORINE for peptide: strict or relaxed
  AMP-binding (469..867): Leu
  nrpys: Leu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      leu (Leu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAFFLGCVFK
    Nearest Stachelhaus code(s):
      Leu DAFFLGCVFK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg13_227: Val - Asp - Leu
  Search NORINE for peptide: strict or relaxed
  AMP-binding (470..864): Val
  nrpys: Val
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      val (Val)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAFWIGGTFK
    Nearest Stachelhaus code(s):
      Val DAFWIGGTFK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1501..1904): Asp
  nrpys: Asp
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
    Large clusters prediction:
      Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
    Small clusters prediction:
      asp,asn (Asp, Asn)
    Single AA prediction:
      asp (Asp)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DLTKVGHIGK
    Nearest Stachelhaus code(s):
      Asp DLTKVGHIGK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (2546..2934): Leu
  nrpys: Leu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      leu (Leu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAWFLGNVVK
    Nearest Stachelhaus code(s):
      Leu DAWFLGNVVK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
ctg13_228: Glu - Leu - Leu
  Search NORINE for peptide: strict or relaxed
  AMP-binding (466..867): Glu
  nrpys: Glu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic (Arg, Asp, Glu, Asn, Lys, Gln, Orn, Aad)
    Large clusters prediction:
      Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
    Small clusters prediction:
      glu,gln (Glu, Gln)
    Single AA prediction:
      gln (Gln)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAKDLGVVDK
    Nearest Stachelhaus code(s):
      Glu DAKDLGVVDK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1510..1908): Leu
  nrpys: Leu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      leu (Leu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAFMMGMVFK
    Nearest Stachelhaus code(s):
      Leu DAFMMGMVFK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (2550..2938): Leu
  nrpys: Leu
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      leu (Leu)
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAWFLGNVVK
    Nearest Stachelhaus code(s):
      Leu DAWFLGNVVK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)