GCA_905205635.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGJHOPOAK_3 (original name was: gnl|Prokka|GJHOPOAK_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	arylpolyene	149,488	197,092	flexirubin	Other	48%

gnlProkkaGJHOPOAK_19 (original name was: gnl|Prokka|GJHOPOAK_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RRE-containing	1	13,812

No secondary metabolite regions were found in these records:: gnlProkkaGJHOPOAK_1 (original name was: gnl|Prokka|GJHOPOAK_1); gnlProkkaGJHOPOAK_2 (original name was: gnl|Prokka|GJHOPOAK_2); gnlProkkaGJHOPOAK_4 (original name was: gnl|Prokka|GJHOPOAK_4); gnlProkkaGJHOPOAK_5 (original name was: gnl|Prokka|GJHOPOAK_5); gnlProkkaGJHOPOAK_6 (original name was: gnl|Prokka|GJHOPOAK_6); gnlProkkaGJHOPOAK_7 (original name was: gnl|Prokka|GJHOPOAK_7); gnlProkkaGJHOPOAK_8 (original name was: gnl|Prokka|GJHOPOAK_8); gnlProkkaGJHOPOAK_9 (original name was: gnl|Prokka|GJHOPOAK_9); gnlProkkaGJHOPOAK_10 (original name was: gnl|Prokka|GJHOPOAK_10); gnlProkkaGJHOPOAK_11 (original name was: gnl|Prokka|GJHOPOAK_11); gnlProkkaGJHOPOAK_12 (original name was: gnl|Prokka|GJHOPOAK_12); gnlProkkaGJHOPOAK_13 (original name was: gnl|Prokka|GJHOPOAK_13); gnlProkkaGJHOPOAK_14 (original name was: gnl|Prokka|GJHOPOAK_14); gnlProkkaGJHOPOAK_15 (original name was: gnl|Prokka|GJHOPOAK_15); gnlProkkaGJHOPOAK_16 (original name was: gnl|Prokka|GJHOPOAK_16); gnlProkkaGJHOPOAK_17 (original name was: gnl|Prokka|GJHOPOAK_17); gnlProkkaGJHOPOAK_18 (original name was: gnl|Prokka|GJHOPOAK_18); gnlProkkaGJHOPOAK_20 (original name was: gnl|Prokka|GJHOPOAK_20); gnlProkkaGJHOPOAK_21 (original name was: gnl|Prokka|GJHOPOAK_21); gnlProkkaGJHOPOAK_22 (original name was: gnl|Prokka|GJHOPOAK_22); gnlProkkaGJHOPOAK_23 (original name was: gnl|Prokka|GJHOPOAK_23); gnlProkkaGJHOPOAK_24 (original name was: gnl|Prokka|GJHOPOAK_24); gnlProkkaGJHOPOAK_25 (original name was: gnl|Prokka|GJHOPOAK_25); gnlProkkaGJHOPOAK_26 (original name was: gnl|Prokka|GJHOPOAK_26); gnlProkkaGJHOPOAK_27 (original name was: gnl|Prokka|GJHOPOAK_27); gnlProkkaGJHOPOAK_28 (original name was: gnl|Prokka|GJHOPOAK_28); gnlProkkaGJHOPOAK_29 (original name was: gnl|Prokka|GJHOPOAK_29); gnlProkkaGJHOPOAK_30 (original name was: gnl|Prokka|GJHOPOAK_30); gnlProkkaGJHOPOAK_31 (original name was: gnl|Prokka|GJHOPOAK_31); gnlProkkaGJHOPOAK_32 (original name was: gnl|Prokka|GJHOPOAK_32); gnlProkkaGJHOPOAK_33 (original name was: gnl|Prokka|GJHOPOAK_33); gnlProkkaGJHOPOAK_34 (original name was: gnl|Prokka|GJHOPOAK_34); gnlProkkaGJHOPOAK_35 (original name was: gnl|Prokka|GJHOPOAK_35); gnlProkkaGJHOPOAK_36 (original name was: gnl|Prokka|GJHOPOAK_36); gnlProkkaGJHOPOAK_37 (original name was: gnl|Prokka|GJHOPOAK_37); gnlProkkaGJHOPOAK_38 (original name was: gnl|Prokka|GJHOPOAK_38); gnlProkkaGJHOPOAK_39 (original name was: gnl|Prokka|GJHOPOAK_39); gnlProkkaGJHOPOAK_40 (original name was: gnl|Prokka|GJHOPOAK_40); gnlProkkaGJHOPOAK_41 (original name was: gnl|Prokka|GJHOPOAK_41); gnlProkkaGJHOPOAK_42 (original name was: gnl|Prokka|GJHOPOAK_42); gnlProkkaGJHOPOAK_43 (original name was: gnl|Prokka|GJHOPOAK_43); gnlProkkaGJHOPOAK_44 (original name was: gnl|Prokka|GJHOPOAK_44); gnlProkkaGJHOPOAK_45 (original name was: gnl|Prokka|GJHOPOAK_45); gnlProkkaGJHOPOAK_46 (original name was: gnl|Prokka|GJHOPOAK_46); gnlProkkaGJHOPOAK_47 (original name was: gnl|Prokka|GJHOPOAK_47); gnlProkkaGJHOPOAK_48 (original name was: gnl|Prokka|GJHOPOAK_48); gnlProkkaGJHOPOAK_49 (original name was: gnl|Prokka|GJHOPOAK_49); gnlProkkaGJHOPOAK_50 (original name was: gnl|Prokka|GJHOPOAK_50); gnlProkkaGJHOPOAK_51 (original name was: gnl|Prokka|GJHOPOAK_51); gnlProkkaGJHOPOAK_52 (original name was: gnl|Prokka|GJHOPOAK_52); gnlProkkaGJHOPOAK_53 (original name was: gnl|Prokka|GJHOPOAK_53); gnlProkkaGJHOPOAK_54 (original name was: gnl|Prokka|GJHOPOAK_54); gnlProkkaGJHOPOAK_55 (original name was: gnl|Prokka|GJHOPOAK_55); gnlProkkaGJHOPOAK_56 (original name was: gnl|Prokka|GJHOPOAK_56); gnlProkkaGJHOPOAK_57 (original name was: gnl|Prokka|GJHOPOAK_57); gnlProkkaGJHOPOAK_58 (original name was: gnl|Prokka|GJHOPOAK_58); gnlProkkaGJHOPOAK_59 (original name was: gnl|Prokka|GJHOPOAK_59); gnlProkkaGJHOPOAK_60 (original name was: gnl|Prokka|GJHOPOAK_60); gnlProkkaGJHOPOAK_61 (original name was: gnl|Prokka|GJHOPOAK_61); gnlProkkaGJHOPOAK_62 (original name was: gnl|Prokka|GJHOPOAK_62); gnlProkkaGJHOPOAK_63 (original name was: gnl|Prokka|GJHOPOAK_63); gnlProkkaGJHOPOAK_64 (original name was: gnl|Prokka|GJHOPOAK_64); gnlProkkaGJHOPOAK_65 (original name was: gnl|Prokka|GJHOPOAK_65); gnlProkkaGJHOPOAK_66 (original name was: gnl|Prokka|GJHOPOAK_66); gnlProkkaGJHOPOAK_67 (original name was: gnl|Prokka|GJHOPOAK_67); gnlProkkaGJHOPOAK_68 (original name was: gnl|Prokka|GJHOPOAK_68); gnlProkkaGJHOPOAK_69 (original name was: gnl|Prokka|GJHOPOAK_69); gnlProkkaGJHOPOAK_70 (original name was: gnl|Prokka|GJHOPOAK_70); gnlProkkaGJHOPOAK_71 (original name was: gnl|Prokka|GJHOPOAK_71); gnlProkkaGJHOPOAK_72 (original name was: gnl|Prokka|GJHOPOAK_72); gnlProkkaGJHOPOAK_73 (original name was: gnl|Prokka|GJHOPOAK_73); gnlProkkaGJHOPOAK_74 (original name was: gnl|Prokka|GJHOPOAK_74); gnlProkkaGJHOPOAK_75 (original name was: gnl|Prokka|GJHOPOAK_75)

Compact view

gnlProkkaGJHOPOAK_3 - Region 1 - arylpolyene

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Location: 149,488 - 197,092 nt. (total: 47,605 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg3_137

AMP-binding (18..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaGJHOPOAK_19 - Region 1 - RRE-containing

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Location: 1 - 13,812 nt. (total: 13,812 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.