GCA_928721605.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOOOMFJFN_11 (original name was: gnl|Prokka|OOOMFJFN_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	cyclic-lactone-autoinducer	1	11,872
Region 11.2	ranthipeptide	202,482	224,101

gnlProkkaOOOMFJFN_16 (original name was: gnl|Prokka|OOOMFJFN_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RRE-containing	43,694	63,951
Region 16.2	RRE-containing	66,590	87,732

Region	Type	From	To	Similarity
Region 11.1	cyclic-lactone-autoinducer	1	11,872
Region 11.2	ranthipeptide	202,482	224,101
Region 16.1	RRE-containing	43,694	63,951
Region 16.2	RRE-containing	66,590	87,732

No secondary metabolite regions were found in these records:: gnlProkkaOOOMFJFN_1 (original name was: gnl|Prokka|OOOMFJFN_1); gnlProkkaOOOMFJFN_2 (original name was: gnl|Prokka|OOOMFJFN_2); gnlProkkaOOOMFJFN_3 (original name was: gnl|Prokka|OOOMFJFN_3); gnlProkkaOOOMFJFN_4 (original name was: gnl|Prokka|OOOMFJFN_4); gnlProkkaOOOMFJFN_5 (original name was: gnl|Prokka|OOOMFJFN_5); gnlProkkaOOOMFJFN_6 (original name was: gnl|Prokka|OOOMFJFN_6); gnlProkkaOOOMFJFN_7 (original name was: gnl|Prokka|OOOMFJFN_7); gnlProkkaOOOMFJFN_8 (original name was: gnl|Prokka|OOOMFJFN_8); gnlProkkaOOOMFJFN_9 (original name was: gnl|Prokka|OOOMFJFN_9); gnlProkkaOOOMFJFN_10 (original name was: gnl|Prokka|OOOMFJFN_10); gnlProkkaOOOMFJFN_12 (original name was: gnl|Prokka|OOOMFJFN_12); gnlProkkaOOOMFJFN_13 (original name was: gnl|Prokka|OOOMFJFN_13); gnlProkkaOOOMFJFN_14 (original name was: gnl|Prokka|OOOMFJFN_14); gnlProkkaOOOMFJFN_15 (original name was: gnl|Prokka|OOOMFJFN_15); gnlProkkaOOOMFJFN_17 (original name was: gnl|Prokka|OOOMFJFN_17); gnlProkkaOOOMFJFN_18 (original name was: gnl|Prokka|OOOMFJFN_18); gnlProkkaOOOMFJFN_19 (original name was: gnl|Prokka|OOOMFJFN_19)

Compact view

gnlProkkaOOOMFJFN_11 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 1 - 11,872 nt. (total: 11,872 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOOMFJFN_11 - Region 2 - ranthipeptide

Download region GenBank file

Download region SVG

Location: 202,482 - 224,101 nt. (total: 21,620 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOOMFJFN_16 - Region 1 - RRE-containing

Download region GenBank file

Download region SVG

Location: 43,694 - 63,951 nt. (total: 20,258 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOOMFJFN_16 - Region 2 - RRE-containing

Download region GenBank file

Download region SVG

Location: 66,590 - 87,732 nt. (total: 21,143 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.