GCA_934838465.1 - 6 region(s)

Identified primary metabolite regions

c00017_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_17)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Pyruvate2acetate-formate	SCFA	12,402	35,393	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

c00021_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_21)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 21.1	acetate2butyrate	SCFA	13,409	30,529	Acetate to butyrate C. sporogenes	BUT	100%

c00028_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_28)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 28.1	Others_HGD_unassigned	Putative	13,533	27,879

c00045_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_45)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 45.1	OD_AA_metabolism	Putative	1	22,013	PFOR II pathway B. thetaiotaomicron	PFORII	100%

c00100_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_100)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 100.1	succinate2propionate	SCFA	1	11,373	Succinate to propionate B. theta	PRO	25%

c00125_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_125)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 125.1	Rnf_complex	E-MGC	1	8,848	Rnf complex C. sporogenes	RNF	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_1); c00002_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_2); c00003_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_3); c00004_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_4); c00005_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_5); c00006_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_6); c00007_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_7); c00008_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_8); c00009_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_9); c00010_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_10); c00011_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_11); c00012_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_12); c00013_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_13); c00014_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_14); c00015_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_15); c00016_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_16); c00018_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_18); c00019_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_19); c00020_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_20); c00022_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_22); c00023_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_23); c00024_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_24); c00025_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_25); c00026_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_26); c00027_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_27); c00029_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_29); c00030_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_30); c00031_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_31); c00032_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_32); c00033_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_33); c00034_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_34); c00035_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_35); c00036_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_36); c00037_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_37); c00038_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_38); c00039_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_39); c00040_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_40); c00041_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_41); c00042_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_42); c00043_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_43); c00044_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_44); c00046_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_46); c00047_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_47); c00048_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_48); c00049_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_49); c00050_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_50); c00051_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_51); c00052_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_52); c00053_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_53); c00054_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_54); c00055_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_55); c00056_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_56); c00057_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_57); c00058_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_58); c00059_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_59); c00060_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_60); c00061_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_61); c00062_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_62); c00063_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_63); c00064_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_64); c00065_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_65); c00066_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_66); c00067_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_67); c00068_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_68); c00069_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_69); c00070_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_70); c00071_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_71); c00072_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_72); c00073_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_73); c00074_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_74); c00075_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_75); c00076_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_76); c00077_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_77); c00078_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_78); c00079_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_79); c00080_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_80); c00081_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_81); c00082_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_82); c00083_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_83); c00084_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_84); c00085_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_85); c00086_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_86); c00087_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_87); c00088_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_88); c00089_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_89); c00090_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_90); c00091_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_91); c00092_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_92); c00093_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_93); c00094_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_94); c00095_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_95); c00096_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_96); c00097_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_97); c00098_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_98); c00099_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_99); c00101_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_101); c00102_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_102); c00103_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_103); c00104_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_104); c00105_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_105); c00106_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_106); c00107_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_107); c00108_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_108); c00109_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_109); c00110_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_110); c00111_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_111); c00112_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_112); c00113_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_113); c00114_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_114); c00115_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_115); c00116_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_116); c00117_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_117); c00118_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_118); c00119_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_119); c00120_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_120); c00121_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_121); c00122_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_122); c00123_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_123); c00124_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_124); c00126_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_126); c00127_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_127); c00128_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_128); c00129_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_129); c00130_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_130); c00131_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_131); c00132_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_132); c00133_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_133); c00134_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_134); c00135_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_135); c00136_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_136); c00137_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_137); c00138_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_138); c00139_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_139); c00140_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_140); c00141_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_141); c00142_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_142); c00143_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_143); c00144_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_144); c00145_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_145); c00146_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_146); c00147_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_147); c00148_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_148); c00149_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_149); c00150_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_150); c00151_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_151); c00152_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_152); c00153_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_153); c00154_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_154); c00155_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_155); c00156_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_156); c00157_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_157); c00158_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_158); c00159_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_159); c00160_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_160); c00161_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_161); c00162_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_162); c00163_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_163); c00164_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_164); c00165_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_165); c00166_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_166); c00167_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_167); c00168_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_168); c00169_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_169); c00170_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_170); c00171_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_171); c00172_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_172); c00173_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_173); c00174_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_174); c00175_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_175); c00176_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_176); c00177_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_177); c00178_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_178); c00179_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_179); c00180_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_180); c00181_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_181); c00182_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_182); c00183_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_183); c00184_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_184); c00185_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_185); c00186_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_186); c00187_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_187); c00188_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_188); c00189_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_189); c00190_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_190); c00191_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_191); c00192_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_192); c00193_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_193); c00194_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_194); c00195_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_195); c00196_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_196); c00197_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_197); c00198_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_198); c00199_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_199); c00200_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_200); c00201_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_201); c00202_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_202); c00203_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_203); c00204_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_204); c00205_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_205); c00206_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_206); c00207_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_207); c00208_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_208); c00209_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_209); c00210_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_210); c00211_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_211); c00212_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_212); c00213_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_213); c00214_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_214); c00215_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_215); c00216_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_216); c00217_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_217); c00218_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_218); c00219_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_219); c00220_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_220); c00221_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_221); c00222_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_222); c00223_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_223); c00224_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_224); c00225_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_225); c00226_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_226); c00227_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_227); c00228_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_228); c00229_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_229); c00230_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_230); c00231_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_231); c00232_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_232); c00233_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_233); c00234_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_234); c00235_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_235); c00236_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_236); c00237_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_237); c00238_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_238); c00239_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_239); c00240_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_240); c00241_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_241); c00242_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_242); c00243_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_243); c00244_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_244); c00245_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_245); c00246_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_246); c00247_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_247); c00248_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_248); c00249_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_249); c00250_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_250); c00251_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_251); c00252_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_252); c00253_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_253); c00254_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_254); c00255_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_255); c00256_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_256); c00257_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_257); c00258_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_258); c00259_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_259); c00260_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_260); c00261_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_261); c00262_gnlPro.. (original name was: gnl|Prokka|GHDGKICM_262)

Compact view

c00017_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 12,402 - 35,393 nt. (total: 22,992 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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c00021_gnlPro.. - Region 1 - acetate2butyrate

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Location: 13,409 - 30,529 nt. (total: 17,121 nt) Show pHMM detection rules used

Region on contig edge.

acetate2butyrate: (not (POR or POR_N or PFOR_II) and minimum(4, [Acyl-CoA_dh_1, Acyl-CoA_dh_2, ECH_2, ETF, ETF_alpha, HCDH_N, Thiolase_N, ketoacyl-synt]) and HCDH and minimum(1, [EC1_2-faecali, ECH1_Enoyl_CoA_DH1, ECH1_Enoyl_CoA_DH2, ECH1_Enoyl_CoA_DH3, ECH1_Enoyl_CoA_DH4, Thiolase_C]))

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c00028_gnlPro.. - Region 1 - Others_HGD_unassigned

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Location: 13,533 - 27,879 nt. (total: 14,347 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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No matches found.

c00045_gnlPro.. - Region 1 - OD_AA_metabolism

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Location: 1 - 22,013 nt. (total: 22,013 nt) Show pHMM detection rules used

Region on contig edge.

OD_AA_metabolism: (minimum(1, [PFOR_II, POR, POR_N]) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

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c00100_gnlPro.. - Region 1 - succinate2propionate

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Location: 1 - 11,373 nt. (total: 11,373 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

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c00125_gnlPro.. - Region 1 - Rnf_complex

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Location: 1 - 8,848 nt. (total: 8,848 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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