GCA_934838585.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPJFLLDPJ_1 (original name was: gnl|Prokka|PJFLLDPJ_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	202,421	222,774

gnlProkkaPJFLLDPJ_17 (original name was: gnl|Prokka|PJFLLDPJ_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RRE-containing	36,834	57,100

gnlProkkaPJFLLDPJ_30 (original name was: gnl|Prokka|PJFLLDPJ_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RiPP-like	8,504	20,672

Region	Type	From	To	Similarity
Region 1.1	RRE-containing	202,421	222,774
Region 17.1	RRE-containing	36,834	57,100
Region 30.1	RiPP-like	8,504	20,672

No secondary metabolite regions were found in these records:: gnlProkkaPJFLLDPJ_2 (original name was: gnl|Prokka|PJFLLDPJ_2); gnlProkkaPJFLLDPJ_3 (original name was: gnl|Prokka|PJFLLDPJ_3); gnlProkkaPJFLLDPJ_4 (original name was: gnl|Prokka|PJFLLDPJ_4); gnlProkkaPJFLLDPJ_5 (original name was: gnl|Prokka|PJFLLDPJ_5); gnlProkkaPJFLLDPJ_6 (original name was: gnl|Prokka|PJFLLDPJ_6); gnlProkkaPJFLLDPJ_7 (original name was: gnl|Prokka|PJFLLDPJ_7); gnlProkkaPJFLLDPJ_8 (original name was: gnl|Prokka|PJFLLDPJ_8); gnlProkkaPJFLLDPJ_9 (original name was: gnl|Prokka|PJFLLDPJ_9); gnlProkkaPJFLLDPJ_10 (original name was: gnl|Prokka|PJFLLDPJ_10); gnlProkkaPJFLLDPJ_11 (original name was: gnl|Prokka|PJFLLDPJ_11); gnlProkkaPJFLLDPJ_12 (original name was: gnl|Prokka|PJFLLDPJ_12); gnlProkkaPJFLLDPJ_13 (original name was: gnl|Prokka|PJFLLDPJ_13); gnlProkkaPJFLLDPJ_14 (original name was: gnl|Prokka|PJFLLDPJ_14); gnlProkkaPJFLLDPJ_15 (original name was: gnl|Prokka|PJFLLDPJ_15); gnlProkkaPJFLLDPJ_16 (original name was: gnl|Prokka|PJFLLDPJ_16); gnlProkkaPJFLLDPJ_18 (original name was: gnl|Prokka|PJFLLDPJ_18); gnlProkkaPJFLLDPJ_19 (original name was: gnl|Prokka|PJFLLDPJ_19); gnlProkkaPJFLLDPJ_20 (original name was: gnl|Prokka|PJFLLDPJ_20); gnlProkkaPJFLLDPJ_21 (original name was: gnl|Prokka|PJFLLDPJ_21); gnlProkkaPJFLLDPJ_22 (original name was: gnl|Prokka|PJFLLDPJ_22); gnlProkkaPJFLLDPJ_23 (original name was: gnl|Prokka|PJFLLDPJ_23); gnlProkkaPJFLLDPJ_24 (original name was: gnl|Prokka|PJFLLDPJ_24); gnlProkkaPJFLLDPJ_25 (original name was: gnl|Prokka|PJFLLDPJ_25); gnlProkkaPJFLLDPJ_26 (original name was: gnl|Prokka|PJFLLDPJ_26); gnlProkkaPJFLLDPJ_27 (original name was: gnl|Prokka|PJFLLDPJ_27); gnlProkkaPJFLLDPJ_28 (original name was: gnl|Prokka|PJFLLDPJ_28); gnlProkkaPJFLLDPJ_29 (original name was: gnl|Prokka|PJFLLDPJ_29); gnlProkkaPJFLLDPJ_31 (original name was: gnl|Prokka|PJFLLDPJ_31); gnlProkkaPJFLLDPJ_32 (original name was: gnl|Prokka|PJFLLDPJ_32); gnlProkkaPJFLLDPJ_33 (original name was: gnl|Prokka|PJFLLDPJ_33); gnlProkkaPJFLLDPJ_34 (original name was: gnl|Prokka|PJFLLDPJ_34); gnlProkkaPJFLLDPJ_35 (original name was: gnl|Prokka|PJFLLDPJ_35); gnlProkkaPJFLLDPJ_36 (original name was: gnl|Prokka|PJFLLDPJ_36); gnlProkkaPJFLLDPJ_37 (original name was: gnl|Prokka|PJFLLDPJ_37); gnlProkkaPJFLLDPJ_38 (original name was: gnl|Prokka|PJFLLDPJ_38); gnlProkkaPJFLLDPJ_39 (original name was: gnl|Prokka|PJFLLDPJ_39); gnlProkkaPJFLLDPJ_40 (original name was: gnl|Prokka|PJFLLDPJ_40); gnlProkkaPJFLLDPJ_41 (original name was: gnl|Prokka|PJFLLDPJ_41); gnlProkkaPJFLLDPJ_42 (original name was: gnl|Prokka|PJFLLDPJ_42); gnlProkkaPJFLLDPJ_43 (original name was: gnl|Prokka|PJFLLDPJ_43); gnlProkkaPJFLLDPJ_44 (original name was: gnl|Prokka|PJFLLDPJ_44); gnlProkkaPJFLLDPJ_45 (original name was: gnl|Prokka|PJFLLDPJ_45); gnlProkkaPJFLLDPJ_46 (original name was: gnl|Prokka|PJFLLDPJ_46); gnlProkkaPJFLLDPJ_47 (original name was: gnl|Prokka|PJFLLDPJ_47); gnlProkkaPJFLLDPJ_48 (original name was: gnl|Prokka|PJFLLDPJ_48); gnlProkkaPJFLLDPJ_49 (original name was: gnl|Prokka|PJFLLDPJ_49); gnlProkkaPJFLLDPJ_50 (original name was: gnl|Prokka|PJFLLDPJ_50); gnlProkkaPJFLLDPJ_51 (original name was: gnl|Prokka|PJFLLDPJ_51); gnlProkkaPJFLLDPJ_52 (original name was: gnl|Prokka|PJFLLDPJ_52); gnlProkkaPJFLLDPJ_53 (original name was: gnl|Prokka|PJFLLDPJ_53); gnlProkkaPJFLLDPJ_54 (original name was: gnl|Prokka|PJFLLDPJ_54)

Compact view

gnlProkkaPJFLLDPJ_1 - Region 1 - RRE-containing

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Location: 202,421 - 222,774 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPJFLLDPJ_17 - Region 1 - RRE-containing

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Location: 36,834 - 57,100 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPJFLLDPJ_30 - Region 1 - RiPP-like

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Location: 8,504 - 20,672 nt. (total: 12,169 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.