GCA_934839125.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLNHBKBGI_1 (original name was: gnl|Prokka|LNHBKBGI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	202,421	222,774

gnlProkkaLNHBKBGI_21 (original name was: gnl|Prokka|LNHBKBGI_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	RRE-containing	36,834	57,100

gnlProkkaLNHBKBGI_23 (original name was: gnl|Prokka|LNHBKBGI_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	39,387	51,555

Region	Type	From	To	Similarity
Region 1.1	RRE-containing	202,421	222,774
Region 21.1	RRE-containing	36,834	57,100
Region 23.1	RiPP-like	39,387	51,555

No secondary metabolite regions were found in these records:: gnlProkkaLNHBKBGI_2 (original name was: gnl|Prokka|LNHBKBGI_2); gnlProkkaLNHBKBGI_3 (original name was: gnl|Prokka|LNHBKBGI_3); gnlProkkaLNHBKBGI_4 (original name was: gnl|Prokka|LNHBKBGI_4); gnlProkkaLNHBKBGI_5 (original name was: gnl|Prokka|LNHBKBGI_5); gnlProkkaLNHBKBGI_6 (original name was: gnl|Prokka|LNHBKBGI_6); gnlProkkaLNHBKBGI_7 (original name was: gnl|Prokka|LNHBKBGI_7); gnlProkkaLNHBKBGI_8 (original name was: gnl|Prokka|LNHBKBGI_8); gnlProkkaLNHBKBGI_9 (original name was: gnl|Prokka|LNHBKBGI_9); gnlProkkaLNHBKBGI_10 (original name was: gnl|Prokka|LNHBKBGI_10); gnlProkkaLNHBKBGI_11 (original name was: gnl|Prokka|LNHBKBGI_11); gnlProkkaLNHBKBGI_12 (original name was: gnl|Prokka|LNHBKBGI_12); gnlProkkaLNHBKBGI_13 (original name was: gnl|Prokka|LNHBKBGI_13); gnlProkkaLNHBKBGI_14 (original name was: gnl|Prokka|LNHBKBGI_14); gnlProkkaLNHBKBGI_15 (original name was: gnl|Prokka|LNHBKBGI_15); gnlProkkaLNHBKBGI_16 (original name was: gnl|Prokka|LNHBKBGI_16); gnlProkkaLNHBKBGI_17 (original name was: gnl|Prokka|LNHBKBGI_17); gnlProkkaLNHBKBGI_18 (original name was: gnl|Prokka|LNHBKBGI_18); gnlProkkaLNHBKBGI_19 (original name was: gnl|Prokka|LNHBKBGI_19); gnlProkkaLNHBKBGI_20 (original name was: gnl|Prokka|LNHBKBGI_20); gnlProkkaLNHBKBGI_22 (original name was: gnl|Prokka|LNHBKBGI_22); gnlProkkaLNHBKBGI_24 (original name was: gnl|Prokka|LNHBKBGI_24); gnlProkkaLNHBKBGI_25 (original name was: gnl|Prokka|LNHBKBGI_25); gnlProkkaLNHBKBGI_26 (original name was: gnl|Prokka|LNHBKBGI_26); gnlProkkaLNHBKBGI_27 (original name was: gnl|Prokka|LNHBKBGI_27); gnlProkkaLNHBKBGI_28 (original name was: gnl|Prokka|LNHBKBGI_28); gnlProkkaLNHBKBGI_29 (original name was: gnl|Prokka|LNHBKBGI_29); gnlProkkaLNHBKBGI_30 (original name was: gnl|Prokka|LNHBKBGI_30); gnlProkkaLNHBKBGI_31 (original name was: gnl|Prokka|LNHBKBGI_31); gnlProkkaLNHBKBGI_32 (original name was: gnl|Prokka|LNHBKBGI_32); gnlProkkaLNHBKBGI_33 (original name was: gnl|Prokka|LNHBKBGI_33); gnlProkkaLNHBKBGI_34 (original name was: gnl|Prokka|LNHBKBGI_34); gnlProkkaLNHBKBGI_35 (original name was: gnl|Prokka|LNHBKBGI_35); gnlProkkaLNHBKBGI_36 (original name was: gnl|Prokka|LNHBKBGI_36); gnlProkkaLNHBKBGI_37 (original name was: gnl|Prokka|LNHBKBGI_37); gnlProkkaLNHBKBGI_38 (original name was: gnl|Prokka|LNHBKBGI_38); gnlProkkaLNHBKBGI_39 (original name was: gnl|Prokka|LNHBKBGI_39); gnlProkkaLNHBKBGI_40 (original name was: gnl|Prokka|LNHBKBGI_40); gnlProkkaLNHBKBGI_41 (original name was: gnl|Prokka|LNHBKBGI_41); gnlProkkaLNHBKBGI_42 (original name was: gnl|Prokka|LNHBKBGI_42); gnlProkkaLNHBKBGI_43 (original name was: gnl|Prokka|LNHBKBGI_43); gnlProkkaLNHBKBGI_44 (original name was: gnl|Prokka|LNHBKBGI_44); gnlProkkaLNHBKBGI_45 (original name was: gnl|Prokka|LNHBKBGI_45); gnlProkkaLNHBKBGI_46 (original name was: gnl|Prokka|LNHBKBGI_46); gnlProkkaLNHBKBGI_47 (original name was: gnl|Prokka|LNHBKBGI_47); gnlProkkaLNHBKBGI_48 (original name was: gnl|Prokka|LNHBKBGI_48); gnlProkkaLNHBKBGI_49 (original name was: gnl|Prokka|LNHBKBGI_49)

Compact view

gnlProkkaLNHBKBGI_1 - Region 1 - RRE-containing

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Location: 202,421 - 222,774 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLNHBKBGI_21 - Region 1 - RRE-containing

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Location: 36,834 - 57,100 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLNHBKBGI_23 - Region 1 - RiPP-like

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Location: 39,387 - 51,555 nt. (total: 12,169 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.