GCA_934854595.1 - 6 region(s)

Identified primary metabolite regions

c00012_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_12)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 12.1	Fumarate2succinate	SCFA	9,591	32,991	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00014_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_14)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Rnf_complex	E-MGC	5,859	31,186	Rnf complex C. sporogenes	RNF	83%

c00015_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_15)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	TPP_AA_metabolism	Putative	3,089	31,420

c00017_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_17)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Pyruvate2acetate-formate	SCFA	14,248	37,297	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00033_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_33)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 33.1	OD_fatty_acids	Putative	2,684	26,262

c00067_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_67)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 67.1	succinate2propionate	SCFA	1	10,904	Succinate to propionate B. theta	PRO	41%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_1); c00002_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_2); c00003_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_3); c00004_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_4); c00005_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_5); c00006_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_6); c00007_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_7); c00008_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_8); c00009_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_9); c00010_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_10); c00011_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_11); c00013_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_13); c00016_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_16); c00018_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_18); c00019_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_19); c00020_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_20); c00021_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_21); c00022_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_22); c00023_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_23); c00024_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_24); c00025_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_25); c00026_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_26); c00027_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_27); c00028_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_28); c00029_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_29); c00030_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_30); c00031_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_31); c00032_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_32); c00034_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_34); c00035_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_35); c00036_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_36); c00037_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_37); c00038_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_38); c00039_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_39); c00040_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_40); c00041_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_41); c00042_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_42); c00043_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_43); c00044_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_44); c00045_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_45); c00046_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_46); c00047_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_47); c00048_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_48); c00049_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_49); c00050_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_50); c00051_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_51); c00052_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_52); c00053_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_53); c00054_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_54); c00055_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_55); c00056_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_56); c00057_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_57); c00058_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_58); c00059_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_59); c00060_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_60); c00061_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_61); c00062_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_62); c00063_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_63); c00064_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_64); c00065_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_65); c00066_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_66); c00068_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_68); c00069_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_69); c00070_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_70); c00071_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_71); c00072_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_72); c00073_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_73); c00074_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_74); c00075_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_75); c00076_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_76); c00077_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_77); c00078_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_78); c00079_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_79); c00080_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_80); c00081_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_81); c00082_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_82); c00083_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_83); c00084_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_84); c00085_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_85); c00086_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_86); c00087_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_87); c00088_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_88); c00089_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_89); c00090_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_90); c00091_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_91); c00092_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_92); c00093_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_93); c00094_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_94); c00095_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_95); c00096_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_96); c00097_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_97); c00098_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_98); c00099_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_99); c00100_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_100); c00101_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_101); c00102_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_102); c00103_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_103); c00104_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_104); c00105_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_105); c00106_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_106); c00107_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_107); c00108_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_108); c00109_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_109); c00110_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_110); c00111_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_111); c00112_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_112); c00113_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_113); c00114_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_114); c00115_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_115); c00116_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_116); c00117_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_117); c00118_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_118); c00119_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_119); c00120_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_120); c00121_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_121); c00122_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_122); c00123_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_123); c00124_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_124); c00125_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_125); c00126_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_126); c00127_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_127); c00128_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_128); c00129_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_129); c00130_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_130); c00131_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_131); c00132_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_132); c00133_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_133); c00134_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_134); c00135_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_135); c00136_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_136); c00137_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_137); c00138_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_138); c00139_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_139); c00140_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_140); c00141_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_141); c00142_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_142); c00143_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_143); c00144_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_144); c00145_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_145); c00146_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_146); c00147_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_147); c00148_gnlPro.. (original name was: gnl|Prokka|IDHHLGGG_148)

Compact view

c00012_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 9,591 - 32,991 nt. (total: 23,401 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00014_gnlPro.. - Region 1 - Rnf_complex

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Location: 5,859 - 31,186 nt. (total: 25,328 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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KnownClusterBlast

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c00015_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 3,089 - 31,420 nt. (total: 28,332 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00017_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 14,248 - 37,297 nt. (total: 23,050 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

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c00033_gnlPro.. - Region 1 - OD_fatty_acids

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Location: 2,684 - 26,262 nt. (total: 23,579 nt) Show pHMM detection rules used

Region on contig edge.

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

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c00067_gnlPro.. - Region 1 - succinate2propionate

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Location: 1 - 10,904 nt. (total: 10,904 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

core biosynthetic genes

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resistance genes

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electron transport genes

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Gene details

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Similar known gene clusters