GCA_934864075.1 - 6 region(s)

Identified primary metabolite regions

c00004_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_4)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	Rnf_complex	E-MGC	26,093	51,420	Rnf complex C. sporogenes	RNF	83%

c00005_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_5)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	porA	SCFA	1	21,988	porA C. sporogenes	POR	60%

c00009_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_9)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	Pyruvate2acetate-formate	SCFA	37,474	60,523	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00017_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_17)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	TPP_AA_metabolism	Putative	17,289	45,620

c00028_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_28)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 28.1	OD_fatty_acids	Putative	5,217	29,830

c00029_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_29)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 29.1	Fumarate2succinate	SCFA	2,995	26,395	Fumarate to succinate B. thetaiotaomicron	SUC	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_1); c00002_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_2); c00003_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_3); c00006_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_6); c00007_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_7); c00008_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_8); c00010_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_10); c00011_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_11); c00012_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_12); c00013_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_13); c00014_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_14); c00015_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_15); c00016_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_16); c00018_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_18); c00019_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_19); c00020_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_20); c00021_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_21); c00022_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_22); c00023_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_23); c00024_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_24); c00025_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_25); c00026_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_26); c00027_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_27); c00030_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_30); c00031_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_31); c00032_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_32); c00033_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_33); c00034_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_34); c00035_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_35); c00036_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_36); c00037_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_37); c00038_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_38); c00039_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_39); c00040_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_40); c00041_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_41); c00042_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_42); c00043_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_43); c00044_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_44); c00045_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_45); c00046_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_46); c00047_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_47); c00048_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_48); c00049_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_49); c00050_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_50); c00051_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_51); c00052_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_52); c00053_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_53); c00054_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_54); c00055_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_55); c00056_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_56); c00057_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_57); c00058_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_58); c00059_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_59); c00060_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_60); c00061_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_61); c00062_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_62); c00063_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_63); c00064_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_64); c00065_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_65); c00066_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_66); c00067_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_67); c00068_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_68); c00069_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_69); c00070_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_70); c00071_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_71); c00072_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_72); c00073_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_73); c00074_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_74); c00075_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_75); c00076_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_76); c00077_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_77); c00078_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_78); c00079_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_79); c00080_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_80); c00081_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_81); c00082_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_82); c00083_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_83); c00084_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_84); c00085_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_85); c00086_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_86); c00087_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_87); c00088_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_88); c00089_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_89); c00090_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_90); c00091_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_91); c00092_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_92); c00093_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_93); c00094_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_94); c00095_gnlPro.. (original name was: gnl|Prokka|CECNHAEG_95)

Compact view

c00004_gnlPro.. - Region 1 - Rnf_complex

Download region GenBank file

Location: 26,093 - 51,420 nt. (total: 25,328 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00005_gnlPro.. - Region 1 - porA

Download region GenBank file

Location: 1 - 21,988 nt. (total: 21,988 nt) Show pHMM detection rules used

Region on contig edge.

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00009_gnlPro.. - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 37,474 - 60,523 nt. (total: 23,050 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00017_gnlPro.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 17,289 - 45,620 nt. (total: 28,332 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00028_gnlPro.. - Region 1 - OD_fatty_acids

Download region GenBank file

Location: 5,217 - 29,830 nt. (total: 24,614 nt) Show pHMM detection rules used

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00029_gnlPro.. - Region 1 - Fumarate2succinate

Download region GenBank file

Location: 2,995 - 26,395 nt. (total: 23,401 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters