Rank Genome ID Species Strain BioSample ID Date Location Host Allelic distance ARGs VFs PGs PPRS 1 GCA_944326285.1 Parabacteroides merdae BRZ_FD__bin66 SAMEA110134191 2016 France - 0 0 0 1 1.00 2 GCA_008679635.1 Parabacteroides merdae LMAG:82 SAMN06546886 - - Homo sapiens 240 0 0 1 1.00 3 GCA_003439005.1 Parabacteroides merdae OM05-11AA SAMN09736795 2013-12-01 China Homo sapiens 262 5 0 1 5.10 4 GCA_002319995.1 Parabacteroides merdae UBA1692 SAMN06453405 - Germany - 580 0 0 1 1.00 5 GCA_003459525.1 Parabacteroides merdae AF19-8 SAMN09734403 2013-12-01 China Homo sapiens 584 4 0 1 4.12 6 GCA_947002275.1 Parabacteroides merdae SRR19721641_bin.15_metawrap_v1.3_MAG SAMEA111396883 2020-06-01 USA - 590 0 0 1 1.00 7 GCA_015554975.1 Parabacteroides merdae D33t1_170424_F9 SAMN15532831 2017-04-24 USA Homo sapiens 636 1 0 0 1.00 8 GCA_028326965.1 Parabacteroides merdae D33st1_H8_D33t1_170424 SAMN31322791 2017-04-24 USA Homo sapiens 658 1 0 0 1.00 9 GCA_027692925.1 Parabacteroides merdae OF29-9pH9A SAMN31809707 2014-02-01 China Homo sapiens 704 4 0 1 4.12 10 GCA_938009615.1 Parabacteroides merdae SRR12395644_bin.0_CONCOCT_v1.1_MAG SAMEA14085448 2015-08-20 Canada - 731 0 0 1 1.00 11 GCA_000307345.1 Parabacteroides merdae CL03T12C32 CL03T12C32 SAMN02463941 - - Homo sapiens 737 1 0 1 1.41 12 GCA_947645905.1 Parabacteroides merdae SRR17794264_bin.23_metawrap_v1.3_MAG SAMEA112247525 2019-06-17 China - 743 0 0 1 1.00 13 GCA_015554045.1 Parabacteroides merdae 1001302B_160321_F2 SAMN15532615 2016-03-21 USA Homo sapiens 760 9 0 1 9.06 14 GCA_020743155.1 Parabacteroides merdae 4937 SAMN21194257 2015 Poland poultry 761 0 0 1 1.00 15 GCA_018363135.1 Parabacteroides merdae L3_123_242G1_dasL3_123_242G1_concoct_76 SAMN17801023 2016/2019 USA Homo sapiens 786 0 0 1 1.00 16 GCA_022728765.1 Parabacteroides merdae Map_54_010 SAMN20301859 2016-06-28 Mozambique Homo sapiens 792 0 0 1 1.00 17 GCA_004166975.1 Parabacteroides merdae bq_0049 SAMN10239578 2015-01 USA Homo sapiens 793 0 0 1 1.00 18 GCA_009719625.1 Parabacteroides merdae BIOML-A25 SAMN11946261 2016-01-19 USA Homo sapiens 793 0 0 1 1.00 19 GCA_949297745.1 Parabacteroides merdae Batch3_idba_bin.620 SAMEA112663287 - Ethiopia - 806 0 0 1 1.00 20 GCA_947854905.1 Parabacteroides merdae chick22__bin10 SAMEA112285448 2016 USA - 809 0 0 1 1.00 21 GCA_003470675.1 Parabacteroides merdae AM16-50 SAMN09734838 2013-08-01 China Homo sapiens 813 3 0 1 3.16 22 GCA_003463945.1 Parabacteroides merdae AM50-15 SAMN09736620 2014-04-01 China Homo sapiens 821 4 0 1 4.12 23 GCA_958406675.1 Parabacteroides merdae ERR8263833_bin.17_MetaWRAP_v1.3_MAG SAMEA114060717 - - - 831 0 0 0 0.00 24 GCA_001404575.1 Parabacteroides merdae 2789STDY5834848 SAMEA3545314 2013 United Kingdom Homo sapiens 913 0 0 1 1.00 25 GCA_902362625.1 Parabacteroides merdae MGYG-HGUT-00044 SAMEA5849545 - United Kingdom - 913 0 0 1 1.00 26 GCA_015555255.1 Parabacteroides merdae D52t1_170925_B4 SAMN15532560 2017-09-25 USA Homo sapiens 931 0 0 1 1.00 27 GCA_028326765.1 Parabacteroides merdae D52st1_G3_D52t1_170925 SAMN31322796 2017-09-25 USA Homo sapiens 931 0 0 1 1.00 28 GCA_028328455.1 Parabacteroides merdae D52st1_D10_D52t1_170925 SAMN31322795 2017-09-25 USA Homo sapiens 931 0 0 1 1.00 29 GCA_015670365.1 Parabacteroides merdae 1001262B_160229_F9 SAMN15533105 2016-02-29 USA Homo sapiens 934 1 0 1 1.41 30 GCA_028328885.1 Parabacteroides merdae 1001262st1_E8_1001262B_160229 SAMN31322757 2016-02-29 USA Homo sapiens 934 1 0 1 1.41 31 GCA_959023305.1 Parabacteroides merdae DRR221351_bin.34_MetaWRAP_v1.3_MAG SAMEA114096365 2018 China - 934 0 0 1 1.00 32 GCA_015553045.1 Parabacteroides merdae D53t1_180928_D7 SAMN15533003 2018-09-28 USA Homo sapiens 935 1 0 1 1.41 33 GCA_019733655.1 Parabacteroides merdae K34_1 SAMN14389557 2020-03-01 China Homo sapiens 935 4 0 1 4.12 34 GCA_027686215.1 Parabacteroides merdae AF102-62 SAMN31807809 2014-02-01 China Homo sapiens 935 2 0 1 2.24 35 GCA_036807005.1 Parabacteroides merdae CTOTU32100 SAMN28749760 - - - 935 1 0 1 1.41 36 GCA_910577545.1 Parabacteroides merdae MGBC103592 SAMEA8805027 - China - 935 1 0 1 1.41 37 GCA_947368825.1 Parabacteroides merdae SRR15431195_bin.21_metawrap_v1.3_MAG SAMEA112147274 2021-02-01 China - 935 0 0 1 1.00 38 GCA_949902765.1 Parabacteroides merdae MGG12699_1680015504 SAMEA112936375 2017-10-25 China - 935 1 0 1 1.41 39 GCA_003469635.1 Parabacteroides merdae AM26-6AC SAMN09736339 2013-11-01 China Homo sapiens 936 1 0 1 1.41 40 GCA_003474345.1 Parabacteroides merdae AF38-4 SAMN09734677 2014-02-01 China Homo sapiens 936 2 0 1 2.24 41 GCA_009719875.1 Parabacteroides merdae BIOML-A10 SAMN11946246 2015-04-01 USA Homo sapiens 936 1 0 1 1.41 42 GCA_009719905.1 Parabacteroides merdae BIOML-A8 SAMN11946244 2015-04-01 USA Homo sapiens 936 1 0 1 1.41 43 GCA_009720005.1 Parabacteroides merdae BIOML-A3 SAMN11946239 2015-04-01 USA Homo sapiens 936 1 0 1 1.41 44 GCA_014870605.1 Parabacteroides merdae COPD090 SAMN12905037 2015-04/2016-09 Australia Homo sapiens 936 0 0 1 1.00 45 GCA_022746415.1 Parabacteroides merdae Map_130_016 SAMN20301237 2017-08-21 Mozambique Homo sapiens 936 0 0 1 1.00 46 GCA_024592595.1 Parabacteroides merdae GSH2021 SAMN30073203 - China Homo sapiens 936 5 0 1 5.10 47 GCA_959597205.1 Parabacteroides merdae SRR16280061_bin.36_MetaWRAP_v1.3_MAG SAMEA114122542 2019-05-01/2020-10-30 China - 936 0 0 1 1.00 48 GCA_015551905.1 Parabacteroides merdae D59t2_181005_G1 SAMN15532731 2018-10-05 USA Homo sapiens 937 1 0 1 1.41 49 GCA_021410265.1 Parabacteroides merdae BJH_5 SAMN20148011 - USA Homo sapiens 937 3 0 1 3.16 50 GCA_022746615.1 Parabacteroides merdae Map_129_021 SAMN20301217 2017-10-22 Mozambique Homo sapiens 937 0 0 1 1.00 51 GCA_963557355.1 Parabacteroides merdae ERS329797__bin67 SAMEA114501434 2006 USA - 937 0 0 1 1.00 52 GCA_003469115.1 Parabacteroides merdae AM34-17 SAMN09736462 2013-12-01 China Homo sapiens 938 4 0 1 4.12 53 GCA_020563655.1 Parabacteroides merdae DFI.1.110 SAMN22167311 - USA Homo sapiens 938 2 0 1 2.24 54 GCA_022137325.1 Parabacteroides merdae DFI.1.88 SAMN24725983 - USA Homo sapiens 938 2 0 1 2.24 55 GCA_022138085.1 Parabacteroides merdae DFI.1.192 SAMN24725962 - USA Homo sapiens 938 2 0 1 2.24 56 GCA_022723475.1 Parabacteroides merdae Map_52_012 SAMN20301842 2016-06-21 Mozambique Homo sapiens 938 0 0 1 1.00 57 GCA_024463475.1 Parabacteroides merdae DFI.1.92 SAMN28944483 - USA Homo sapiens 938 2 0 1 2.24 58 GCA_958434225.1 Parabacteroides merdae SRR22541672_bin.9_MetaWRAP_v1.3_MAG SAMEA114065286 2018-03-05 China - 938 0 0 1 1.00 59 GCA_003469345.1 Parabacteroides merdae AM30-44 SAMN09736418 2013-12-01 China Homo sapiens 939 2 0 1 2.24 60 GCA_015548105.1 Parabacteroides merdae 1001095IJ_161003_F2 SAMN15533152 2016-10-03 USA Homo sapiens 939 2 0 1 2.24 61 GCA_015558865.1 Parabacteroides merdae 1001136B_160425_B1 SAMN15533221 2016-04-25 USA Homo sapiens 939 4 0 1 4.12 62 GCA_022726515.1 Parabacteroides merdae Map_21_009 SAMN20301614 2015-05-13 Mozambique Homo sapiens 939 0 0 1 1.00 63 GCA_003475305.1 Parabacteroides merdae AF33-34 SAMN09734606 2014-01-01 China Homo sapiens 940 3 0 1 3.16 64 GCA_019042155.1 Parabacteroides merdae DFI.4.154 SAMN19732234 - USA Homo sapiens 940 2 0 1 2.24 65 GCA_021411685.1 Parabacteroides merdae BJH_172 SAMN20148139 - USA Homo sapiens 940 3 0 1 3.16 66 GCA_022136865.1 Parabacteroides merdae DFI.4.164 SAMN24725996 - USA Homo sapiens 940 1 0 1 1.41 67 GCA_022783065.1 Parabacteroides merdae SUG879 SAMN26526103 2019 Canada Sus scrofa domesticus 940 2 0 1 2.24 68 GCA_024463155.2 Parabacteroides merdae DFI.4.73 SAMN28944501 - USA Homo sapiens 940 1 0 1 1.41 69 GCA_028328305.1 Parabacteroides merdae RTP21484st1_A7_RTP21484_190118 SAMN31322802 2019-01-18 USA Homo sapiens 940 3 0 1 3.16 70 GCA_028328355.1 Parabacteroides merdae RTP21484st1_E1_RTP21484_190118 SAMN31322803 2019-01-18 USA Homo sapiens 940 3 0 1 3.16 71 GCA_028328905.1 Parabacteroides merdae 1001095st1_A4_1001095IJ_161003 SAMN31322756 2016-10-03 USA Homo sapiens 940 2 0 1 2.24 72 GCA_034171025.1 Parabacteroides merdae SUG3465 SAMN37949450 2020 Canada swine 940 0 0 1 1.00 73 GCA_905192885.1 Parabacteroides merdae ERR1430520-bin.25 SAMEA7846734 - China - 940 0 0 1 1.00 74 GCA_000433955.1 Parabacteroides merdae CAG:48 SAMEA3138585 - - - 941 0 0 1 1.00 75 GCA_003458945.1 Parabacteroides merdae AF26-22BH SAMN09734513 2013-12-01 China Homo sapiens 941 2 0 1 2.24 76 GCA_003503315.1 Parabacteroides merdae UBA11761 SAMN08019002 - - - 941 0 0 1 1.00 77 GCA_015668095.1 Parabacteroides merdae 1001270H_150608_G12 SAMN15533348 2015-06-08 USA Homo sapiens 941 3 0 1 3.16 78 GCA_022787455.1 Parabacteroides merdae SUG1078 SAMN26927404 2019 Canada Sus scrofa domesticus 941 0 0 1 1.00 79 GCA_026169675.1 Parabacteroides merdae bin_3_LilbubCat SAMN31537019 2022 USA Felis catus 941 0 0 1 1.00 80 GCA_028328505.1 Parabacteroides merdae D35st1_A5_D35t1_190705 SAMN31322793 2019-07-05 USA Homo sapiens 941 2 0 1 2.24 81 GCA_036552125.1 Parabacteroides merdae DOME_MAG_8922 SAMN38021852 - USA Homo sapiens 941 0 0 1 1.00 82 GCA_948955895.1 Parabacteroides merdae MGBC125402 SAMEA112398864 - China - 941 0 0 1 1.00 83 GCA_958351535.1 Parabacteroides merdae ERR4918982_bin.16_MetaWRAP_v1.3_MAG SAMEA114062695 2019-02-12 China - 941 0 0 1 1.00 84 GCA_958370885.1 Parabacteroides merdae SRR17798048_bin.12_MetaWRAP_v1.3_MAG SAMEA114066098 2020-04/2020-11 China - 941 0 0 1 1.00 85 GCA_958417795.1 Parabacteroides merdae ERR9762700_bin.71_MetaWRAP_v1.3_MAG SAMEA114064420 2019 Sweden - 941 0 0 1 1.00 86 GCA_958443225.1 Parabacteroides merdae ERR9578215_bin.4_MetaWRAP_v1.3_MAG SAMEA114063045 2018 Germany - 941 1 0 1 1.41 87 GCA_003475825.1 Parabacteroides merdae AF31-17 SAMN09734575 2014-01-01 China Homo sapiens 942 4 0 1 4.12 88 GCA_028326705.1 Parabacteroides merdae D35st1_A2_D35t1_190705 SAMN31322792 2019-07-05 USA Homo sapiens 942 2 0 1 2.24 89 GCA_028328385.1 Parabacteroides merdae 1028st1_A4_1028SCRN_200821 SAMN31322781 2020-08-21 USA Homo sapiens 942 1 0 1 1.41 90 GCA_958402135.1 Parabacteroides merdae ERR9492513_bin.11_MetaWRAP_v1.3_MAG SAMEA114063947 - - - 942 0 0 1 1.00 91 GCA_959019525.1 Parabacteroides merdae SRR20881974_bin.1_MetaWRAP_v1.3_MAG SAMEA114095515 2019-05-01 USA - 942 0 0 1 1.00 92 GCA_003540425.1 Parabacteroides merdae UBA9108 SAMN08019952 - - - 943 0 0 1 1.00 93 GCA_015547825.1 Parabacteroides merdae 1001713B170207_170306_F10 SAMN15532439 2017-03-06 USA Homo sapiens 943 2 0 1 2.24 94 GCA_022835275.1 Parabacteroides merdae CE91-St3 SAMD00389890 2018-11-01 Japan Homo sapiens 943 2 0 1 2.24 95 GCA_024125345.1 Parabacteroides merdae NB2A-29-D6 SAMN28102043 2016-04 - Homo sapiens 943 3 0 1 3.16 96 GCA_028326665.1 Parabacteroides merdae 1001713st1_B7_1001713B170131_170501 SAMN31322775 2017-05-01 USA Homo sapiens 943 2 0 1 2.24 97 GCA_028326685.1 Parabacteroides merdae 1001713st1_C2_1001713B170214_170313 SAMN31322776 2017-03-13 USA Homo sapiens 943 2 0 1 2.24 98 GCA_028328445.1 Parabacteroides merdae 1001713st1_G4_1001713B170207_170306 SAMN31322780 2017-03-06 USA Homo sapiens 943 2 0 1 2.24 99 GCA_028328485.1 Parabacteroides merdae 1001713st1_E1_1001713B170214_170313 SAMN31322778 2017-03-13 USA Homo sapiens 943 2 0 1 2.24 100 GCA_028328525.1 Parabacteroides merdae 1001713st1_E11_1001713B170207_170306 SAMN31322777 2017-03-06 USA Homo sapiens 943 2 0 1 2.24