GCA_948914655.1 - 7 region(s)

Identified primary metabolite regions

c00001_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	Pyruvate2acetate-formate	SCFA	20,667	43,622	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00003_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_3)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	NADH_dehydrogenase_I	E-MGC	59,306	85,170	NADH dehydrogenase I Bacteroides sp.	NADHD	80%

c00009_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_9)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	succinate2propionate	SCFA	6,232	30,940	Succinate to propionate B. theta	PRO	75%

c00017_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_17)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Fumarate2succinate	SCFA	4,875	28,345	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00046_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_46)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 46.1	TPP_AA_metabolism	Putative	6,353	25,763

c00063_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_63)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 63.1	PFOR_II_pathway	SCFA	1	19,824	PFOR II pathway B. thetaiotaomicron	PFORII	100%

c00078_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_78)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 78.1	Rnf_complex	E-MGC	1	15,926	Rnf complex C. sporogenes	RNF	66%

No primary metabolite regions were found in these records:: c00002_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_2); c00004_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_4); c00005_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_5); c00006_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_6); c00007_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_7); c00008_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_8); c00010_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_10); c00011_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_11); c00012_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_12); c00013_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_13); c00014_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_14); c00015_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_15); c00016_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_16); c00018_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_18); c00019_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_19); c00020_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_20); c00021_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_21); c00022_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_22); c00023_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_23); c00024_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_24); c00025_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_25); c00026_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_26); c00027_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_27); c00028_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_28); c00029_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_29); c00030_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_30); c00031_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_31); c00032_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_32); c00033_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_33); c00034_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_34); c00035_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_35); c00036_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_36); c00037_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_37); c00038_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_38); c00039_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_39); c00040_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_40); c00041_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_41); c00042_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_42); c00043_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_43); c00044_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_44); c00045_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_45); c00047_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_47); c00048_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_48); c00049_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_49); c00050_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_50); c00051_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_51); c00052_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_52); c00053_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_53); c00054_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_54); c00055_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_55); c00056_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_56); c00057_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_57); c00058_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_58); c00059_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_59); c00060_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_60); c00061_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_61); c00062_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_62); c00064_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_64); c00065_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_65); c00066_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_66); c00067_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_67); c00068_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_68); c00069_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_69); c00070_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_70); c00071_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_71); c00072_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_72); c00073_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_73); c00074_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_74); c00075_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_75); c00076_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_76); c00077_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_77); c00079_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_79); c00080_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_80); c00081_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_81); c00082_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_82); c00083_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_83); c00084_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_84); c00085_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_85); c00086_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_86); c00087_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_87); c00088_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_88); c00089_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_89); c00090_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_90); c00091_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_91); c00092_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_92); c00093_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_93); c00094_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_94); c00095_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_95); c00096_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_96); c00097_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_97); c00098_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_98); c00099_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_99); c00100_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_100); c00101_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_101); c00102_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_102); c00103_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_103); c00104_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_104); c00105_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_105); c00106_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_106); c00107_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_107); c00108_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_108); c00109_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_109); c00110_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_110); c00111_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_111); c00112_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_112); c00113_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_113); c00114_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_114); c00115_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_115); c00116_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_116); c00117_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_117); c00118_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_118); c00119_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_119); c00120_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_120); c00121_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_121); c00122_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_122); c00123_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_123); c00124_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_124); c00125_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_125); c00126_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_126); c00127_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_127); c00128_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_128); c00129_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_129); c00130_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_130); c00131_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_131); c00132_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_132); c00133_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_133); c00134_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_134); c00135_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_135); c00136_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_136); c00137_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_137); c00138_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_138); c00139_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_139); c00140_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_140); c00141_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_141); c00142_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_142); c00143_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_143); c00144_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_144); c00145_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_145); c00146_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_146); c00147_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_147); c00148_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_148); c00149_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_149); c00150_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_150); c00151_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_151); c00152_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_152); c00153_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_153); c00154_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_154); c00155_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_155); c00156_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_156); c00157_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_157); c00158_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_158); c00159_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_159); c00160_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_160); c00161_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_161); c00162_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_162); c00163_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_163); c00164_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_164); c00165_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_165); c00166_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_166); c00167_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_167); c00168_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_168); c00169_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_169); c00170_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_170); c00171_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_171); c00172_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_172); c00173_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_173); c00174_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_174); c00175_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_175); c00176_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_176); c00177_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_177); c00178_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_178); c00179_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_179); c00180_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_180); c00181_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_181); c00182_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_182); c00183_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_183); c00184_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_184); c00185_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_185); c00186_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_186); c00187_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_187); c00188_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_188); c00189_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_189); c00190_gnlPro.. (original name was: gnl|Prokka|GCMHFKML_190)

Compact view

c00001_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 20,667 - 43,622 nt. (total: 22,956 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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c00003_gnlPro.. - Region 1 - NADH_dehydrogenase_I

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Location: 59,306 - 85,170 nt. (total: 25,865 nt) Show pHMM detection rules used

Region on contig edge.

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

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c00009_gnlPro.. - Region 1 - succinate2propionate

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Location: 6,232 - 30,940 nt. (total: 24,709 nt) Show pHMM detection rules used

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

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c00017_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 4,875 - 28,345 nt. (total: 23,471 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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c00046_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 6,353 - 25,763 nt. (total: 19,411 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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c00063_gnlPro.. - Region 1 - PFOR_II_pathway

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Location: 1 - 19,824 nt. (total: 19,824 nt) Show pHMM detection rules used

Region on contig edge.

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

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c00078_gnlPro.. - Region 1 - Rnf_complex

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Location: 1 - 15,926 nt. (total: 15,926 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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