GCA_949379375.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCBOHIEGI_1 (original name was: gnl|Prokka|CBOHIEGI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	105,554	153,092	flexirubin	Other	48%

gnlProkkaCBOHIEGI_36 (original name was: gnl|Prokka|CBOHIEGI_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RiPP-like	1	8,691

Compact view

gnlProkkaCBOHIEGI_1 - Region 1 - arylpolyene

Download region GenBank file

Download region SVG

Location: 105,554 - 153,092 nt. (total: 47,539 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg1_115

AMP-binding (55..293): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMVITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaCBOHIEGI_36 - Region 1 - RiPP-like