GCA_949399395.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLDCHJKHI_1 (original name was: gnl|Prokka|LDCHJKHI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	47,783	95,321	flexirubin	Other	48%

gnlProkkaLDCHJKHI_54 (original name was: gnl|Prokka|LDCHJKHI_54)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	RiPP-like	9,845	18,535

Compact view

gnlProkkaLDCHJKHI_1 - Region 1 - arylpolyene

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Location: 47,783 - 95,321 nt. (total: 47,539 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg1_36

AMP-binding (55..293): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMVITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaLDCHJKHI_54 - Region 1 - RiPP-like