GCA_958347535.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFHBFGMDF_6 (original name was: gnl|Prokka|FHBFGMDF_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	ranthipeptide	1	15,492

gnlProkkaFHBFGMDF_18 (original name was: gnl|Prokka|FHBFGMDF_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	NRPS	1	23,987	dipeptide aldehydes	NRP	47%

gnlProkkaFHBFGMDF_89 (original name was: gnl|Prokka|FHBFGMDF_89)

Region	Type	From	To	Most similar known cluster		Similarity
Region 89.1	cyclic-lactone-autoinducer	1	9,115

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	ranthipeptide	1	15,492
Region 18.1	NRPS	1	23,987	dipeptide aldehydes	NRP	47%
Region 89.1	cyclic-lactone-autoinducer	1	9,115

No secondary metabolite regions were found in these records:: gnlProkkaFHBFGMDF_1 (original name was: gnl|Prokka|FHBFGMDF_1); gnlProkkaFHBFGMDF_2 (original name was: gnl|Prokka|FHBFGMDF_2); gnlProkkaFHBFGMDF_3 (original name was: gnl|Prokka|FHBFGMDF_3); gnlProkkaFHBFGMDF_4 (original name was: gnl|Prokka|FHBFGMDF_4); gnlProkkaFHBFGMDF_5 (original name was: gnl|Prokka|FHBFGMDF_5); gnlProkkaFHBFGMDF_7 (original name was: gnl|Prokka|FHBFGMDF_7); gnlProkkaFHBFGMDF_8 (original name was: gnl|Prokka|FHBFGMDF_8); gnlProkkaFHBFGMDF_9 (original name was: gnl|Prokka|FHBFGMDF_9); gnlProkkaFHBFGMDF_10 (original name was: gnl|Prokka|FHBFGMDF_10); gnlProkkaFHBFGMDF_11 (original name was: gnl|Prokka|FHBFGMDF_11); gnlProkkaFHBFGMDF_12 (original name was: gnl|Prokka|FHBFGMDF_12); gnlProkkaFHBFGMDF_13 (original name was: gnl|Prokka|FHBFGMDF_13); gnlProkkaFHBFGMDF_14 (original name was: gnl|Prokka|FHBFGMDF_14); gnlProkkaFHBFGMDF_15 (original name was: gnl|Prokka|FHBFGMDF_15); gnlProkkaFHBFGMDF_16 (original name was: gnl|Prokka|FHBFGMDF_16); gnlProkkaFHBFGMDF_17 (original name was: gnl|Prokka|FHBFGMDF_17); gnlProkkaFHBFGMDF_19 (original name was: gnl|Prokka|FHBFGMDF_19); gnlProkkaFHBFGMDF_20 (original name was: gnl|Prokka|FHBFGMDF_20); gnlProkkaFHBFGMDF_21 (original name was: gnl|Prokka|FHBFGMDF_21); gnlProkkaFHBFGMDF_22 (original name was: gnl|Prokka|FHBFGMDF_22); gnlProkkaFHBFGMDF_23 (original name was: gnl|Prokka|FHBFGMDF_23); gnlProkkaFHBFGMDF_24 (original name was: gnl|Prokka|FHBFGMDF_24); gnlProkkaFHBFGMDF_25 (original name was: gnl|Prokka|FHBFGMDF_25); gnlProkkaFHBFGMDF_26 (original name was: gnl|Prokka|FHBFGMDF_26); gnlProkkaFHBFGMDF_27 (original name was: gnl|Prokka|FHBFGMDF_27); gnlProkkaFHBFGMDF_28 (original name was: gnl|Prokka|FHBFGMDF_28); gnlProkkaFHBFGMDF_29 (original name was: gnl|Prokka|FHBFGMDF_29); gnlProkkaFHBFGMDF_30 (original name was: gnl|Prokka|FHBFGMDF_30); gnlProkkaFHBFGMDF_31 (original name was: gnl|Prokka|FHBFGMDF_31); gnlProkkaFHBFGMDF_32 (original name was: gnl|Prokka|FHBFGMDF_32); gnlProkkaFHBFGMDF_33 (original name was: gnl|Prokka|FHBFGMDF_33); gnlProkkaFHBFGMDF_34 (original name was: gnl|Prokka|FHBFGMDF_34); gnlProkkaFHBFGMDF_35 (original name was: gnl|Prokka|FHBFGMDF_35); gnlProkkaFHBFGMDF_36 (original name was: gnl|Prokka|FHBFGMDF_36); gnlProkkaFHBFGMDF_37 (original name was: gnl|Prokka|FHBFGMDF_37); gnlProkkaFHBFGMDF_38 (original name was: gnl|Prokka|FHBFGMDF_38); gnlProkkaFHBFGMDF_39 (original name was: gnl|Prokka|FHBFGMDF_39); gnlProkkaFHBFGMDF_40 (original name was: gnl|Prokka|FHBFGMDF_40); gnlProkkaFHBFGMDF_41 (original name was: gnl|Prokka|FHBFGMDF_41); gnlProkkaFHBFGMDF_42 (original name was: gnl|Prokka|FHBFGMDF_42); gnlProkkaFHBFGMDF_43 (original name was: gnl|Prokka|FHBFGMDF_43); gnlProkkaFHBFGMDF_44 (original name was: gnl|Prokka|FHBFGMDF_44); gnlProkkaFHBFGMDF_45 (original name was: gnl|Prokka|FHBFGMDF_45); gnlProkkaFHBFGMDF_46 (original name was: gnl|Prokka|FHBFGMDF_46); gnlProkkaFHBFGMDF_47 (original name was: gnl|Prokka|FHBFGMDF_47); gnlProkkaFHBFGMDF_48 (original name was: gnl|Prokka|FHBFGMDF_48); gnlProkkaFHBFGMDF_49 (original name was: gnl|Prokka|FHBFGMDF_49); gnlProkkaFHBFGMDF_50 (original name was: gnl|Prokka|FHBFGMDF_50); gnlProkkaFHBFGMDF_51 (original name was: gnl|Prokka|FHBFGMDF_51); gnlProkkaFHBFGMDF_52 (original name was: gnl|Prokka|FHBFGMDF_52); gnlProkkaFHBFGMDF_53 (original name was: gnl|Prokka|FHBFGMDF_53); gnlProkkaFHBFGMDF_54 (original name was: gnl|Prokka|FHBFGMDF_54); gnlProkkaFHBFGMDF_55 (original name was: gnl|Prokka|FHBFGMDF_55); gnlProkkaFHBFGMDF_56 (original name was: gnl|Prokka|FHBFGMDF_56); gnlProkkaFHBFGMDF_57 (original name was: gnl|Prokka|FHBFGMDF_57); gnlProkkaFHBFGMDF_58 (original name was: gnl|Prokka|FHBFGMDF_58); gnlProkkaFHBFGMDF_59 (original name was: gnl|Prokka|FHBFGMDF_59); gnlProkkaFHBFGMDF_60 (original name was: gnl|Prokka|FHBFGMDF_60); gnlProkkaFHBFGMDF_61 (original name was: gnl|Prokka|FHBFGMDF_61); gnlProkkaFHBFGMDF_62 (original name was: gnl|Prokka|FHBFGMDF_62); gnlProkkaFHBFGMDF_63 (original name was: gnl|Prokka|FHBFGMDF_63); gnlProkkaFHBFGMDF_64 (original name was: gnl|Prokka|FHBFGMDF_64); gnlProkkaFHBFGMDF_65 (original name was: gnl|Prokka|FHBFGMDF_65); gnlProkkaFHBFGMDF_66 (original name was: gnl|Prokka|FHBFGMDF_66); gnlProkkaFHBFGMDF_67 (original name was: gnl|Prokka|FHBFGMDF_67); gnlProkkaFHBFGMDF_68 (original name was: gnl|Prokka|FHBFGMDF_68); gnlProkkaFHBFGMDF_69 (original name was: gnl|Prokka|FHBFGMDF_69); gnlProkkaFHBFGMDF_70 (original name was: gnl|Prokka|FHBFGMDF_70); gnlProkkaFHBFGMDF_71 (original name was: gnl|Prokka|FHBFGMDF_71); gnlProkkaFHBFGMDF_72 (original name was: gnl|Prokka|FHBFGMDF_72); gnlProkkaFHBFGMDF_73 (original name was: gnl|Prokka|FHBFGMDF_73); gnlProkkaFHBFGMDF_74 (original name was: gnl|Prokka|FHBFGMDF_74); gnlProkkaFHBFGMDF_75 (original name was: gnl|Prokka|FHBFGMDF_75); gnlProkkaFHBFGMDF_76 (original name was: gnl|Prokka|FHBFGMDF_76); gnlProkkaFHBFGMDF_77 (original name was: gnl|Prokka|FHBFGMDF_77); gnlProkkaFHBFGMDF_78 (original name was: gnl|Prokka|FHBFGMDF_78); gnlProkkaFHBFGMDF_79 (original name was: gnl|Prokka|FHBFGMDF_79); gnlProkkaFHBFGMDF_80 (original name was: gnl|Prokka|FHBFGMDF_80); gnlProkkaFHBFGMDF_81 (original name was: gnl|Prokka|FHBFGMDF_81); gnlProkkaFHBFGMDF_82 (original name was: gnl|Prokka|FHBFGMDF_82); gnlProkkaFHBFGMDF_83 (original name was: gnl|Prokka|FHBFGMDF_83); gnlProkkaFHBFGMDF_84 (original name was: gnl|Prokka|FHBFGMDF_84); gnlProkkaFHBFGMDF_85 (original name was: gnl|Prokka|FHBFGMDF_85); gnlProkkaFHBFGMDF_86 (original name was: gnl|Prokka|FHBFGMDF_86); gnlProkkaFHBFGMDF_87 (original name was: gnl|Prokka|FHBFGMDF_87); gnlProkkaFHBFGMDF_88 (original name was: gnl|Prokka|FHBFGMDF_88); gnlProkkaFHBFGMDF_90 (original name was: gnl|Prokka|FHBFGMDF_90); gnlProkkaFHBFGMDF_91 (original name was: gnl|Prokka|FHBFGMDF_91); gnlProkkaFHBFGMDF_92 (original name was: gnl|Prokka|FHBFGMDF_92); gnlProkkaFHBFGMDF_93 (original name was: gnl|Prokka|FHBFGMDF_93); gnlProkkaFHBFGMDF_94 (original name was: gnl|Prokka|FHBFGMDF_94); gnlProkkaFHBFGMDF_95 (original name was: gnl|Prokka|FHBFGMDF_95); gnlProkkaFHBFGMDF_96 (original name was: gnl|Prokka|FHBFGMDF_96); gnlProkkaFHBFGMDF_97 (original name was: gnl|Prokka|FHBFGMDF_97); gnlProkkaFHBFGMDF_98 (original name was: gnl|Prokka|FHBFGMDF_98); gnlProkkaFHBFGMDF_99 (original name was: gnl|Prokka|FHBFGMDF_99); gnlProkkaFHBFGMDF_100 (original name was: gnl|Prokka|FHBFGMDF_100); gnlProkkaFHBFGMDF_101 (original name was: gnl|Prokka|FHBFGMDF_101); gnlProkkaFHBFGMDF_102 (original name was: gnl|Prokka|FHBFGMDF_102); gnlProkkaFHBFGMDF_103 (original name was: gnl|Prokka|FHBFGMDF_103); gnlProkkaFHBFGMDF_104 (original name was: gnl|Prokka|FHBFGMDF_104); gnlProkkaFHBFGMDF_105 (original name was: gnl|Prokka|FHBFGMDF_105); gnlProkkaFHBFGMDF_106 (original name was: gnl|Prokka|FHBFGMDF_106); gnlProkkaFHBFGMDF_107 (original name was: gnl|Prokka|FHBFGMDF_107); gnlProkkaFHBFGMDF_108 (original name was: gnl|Prokka|FHBFGMDF_108); gnlProkkaFHBFGMDF_109 (original name was: gnl|Prokka|FHBFGMDF_109); gnlProkkaFHBFGMDF_110 (original name was: gnl|Prokka|FHBFGMDF_110); gnlProkkaFHBFGMDF_111 (original name was: gnl|Prokka|FHBFGMDF_111); gnlProkkaFHBFGMDF_112 (original name was: gnl|Prokka|FHBFGMDF_112); gnlProkkaFHBFGMDF_113 (original name was: gnl|Prokka|FHBFGMDF_113); gnlProkkaFHBFGMDF_114 (original name was: gnl|Prokka|FHBFGMDF_114); gnlProkkaFHBFGMDF_115 (original name was: gnl|Prokka|FHBFGMDF_115); gnlProkkaFHBFGMDF_116 (original name was: gnl|Prokka|FHBFGMDF_116); gnlProkkaFHBFGMDF_117 (original name was: gnl|Prokka|FHBFGMDF_117); gnlProkkaFHBFGMDF_118 (original name was: gnl|Prokka|FHBFGMDF_118); gnlProkkaFHBFGMDF_119 (original name was: gnl|Prokka|FHBFGMDF_119); gnlProkkaFHBFGMDF_120 (original name was: gnl|Prokka|FHBFGMDF_120); gnlProkkaFHBFGMDF_121 (original name was: gnl|Prokka|FHBFGMDF_121); gnlProkkaFHBFGMDF_122 (original name was: gnl|Prokka|FHBFGMDF_122); gnlProkkaFHBFGMDF_123 (original name was: gnl|Prokka|FHBFGMDF_123); gnlProkkaFHBFGMDF_124 (original name was: gnl|Prokka|FHBFGMDF_124); gnlProkkaFHBFGMDF_125 (original name was: gnl|Prokka|FHBFGMDF_125); gnlProkkaFHBFGMDF_126 (original name was: gnl|Prokka|FHBFGMDF_126); gnlProkkaFHBFGMDF_127 (original name was: gnl|Prokka|FHBFGMDF_127); gnlProkkaFHBFGMDF_128 (original name was: gnl|Prokka|FHBFGMDF_128); gnlProkkaFHBFGMDF_129 (original name was: gnl|Prokka|FHBFGMDF_129); gnlProkkaFHBFGMDF_130 (original name was: gnl|Prokka|FHBFGMDF_130); gnlProkkaFHBFGMDF_131 (original name was: gnl|Prokka|FHBFGMDF_131); gnlProkkaFHBFGMDF_132 (original name was: gnl|Prokka|FHBFGMDF_132); gnlProkkaFHBFGMDF_133 (original name was: gnl|Prokka|FHBFGMDF_133); gnlProkkaFHBFGMDF_134 (original name was: gnl|Prokka|FHBFGMDF_134); gnlProkkaFHBFGMDF_135 (original name was: gnl|Prokka|FHBFGMDF_135); gnlProkkaFHBFGMDF_136 (original name was: gnl|Prokka|FHBFGMDF_136); gnlProkkaFHBFGMDF_137 (original name was: gnl|Prokka|FHBFGMDF_137); gnlProkkaFHBFGMDF_138 (original name was: gnl|Prokka|FHBFGMDF_138); gnlProkkaFHBFGMDF_139 (original name was: gnl|Prokka|FHBFGMDF_139); gnlProkkaFHBFGMDF_140 (original name was: gnl|Prokka|FHBFGMDF_140); gnlProkkaFHBFGMDF_141 (original name was: gnl|Prokka|FHBFGMDF_141); gnlProkkaFHBFGMDF_142 (original name was: gnl|Prokka|FHBFGMDF_142); gnlProkkaFHBFGMDF_143 (original name was: gnl|Prokka|FHBFGMDF_143); gnlProkkaFHBFGMDF_144 (original name was: gnl|Prokka|FHBFGMDF_144); gnlProkkaFHBFGMDF_145 (original name was: gnl|Prokka|FHBFGMDF_145); gnlProkkaFHBFGMDF_146 (original name was: gnl|Prokka|FHBFGMDF_146); gnlProkkaFHBFGMDF_147 (original name was: gnl|Prokka|FHBFGMDF_147); gnlProkkaFHBFGMDF_148 (original name was: gnl|Prokka|FHBFGMDF_148); gnlProkkaFHBFGMDF_149 (original name was: gnl|Prokka|FHBFGMDF_149); gnlProkkaFHBFGMDF_150 (original name was: gnl|Prokka|FHBFGMDF_150); gnlProkkaFHBFGMDF_151 (original name was: gnl|Prokka|FHBFGMDF_151); gnlProkkaFHBFGMDF_152 (original name was: gnl|Prokka|FHBFGMDF_152); gnlProkkaFHBFGMDF_153 (original name was: gnl|Prokka|FHBFGMDF_153); gnlProkkaFHBFGMDF_154 (original name was: gnl|Prokka|FHBFGMDF_154); gnlProkkaFHBFGMDF_155 (original name was: gnl|Prokka|FHBFGMDF_155); gnlProkkaFHBFGMDF_156 (original name was: gnl|Prokka|FHBFGMDF_156); gnlProkkaFHBFGMDF_157 (original name was: gnl|Prokka|FHBFGMDF_157); gnlProkkaFHBFGMDF_158 (original name was: gnl|Prokka|FHBFGMDF_158); gnlProkkaFHBFGMDF_159 (original name was: gnl|Prokka|FHBFGMDF_159); gnlProkkaFHBFGMDF_160 (original name was: gnl|Prokka|FHBFGMDF_160); gnlProkkaFHBFGMDF_161 (original name was: gnl|Prokka|FHBFGMDF_161); gnlProkkaFHBFGMDF_162 (original name was: gnl|Prokka|FHBFGMDF_162); gnlProkkaFHBFGMDF_163 (original name was: gnl|Prokka|FHBFGMDF_163); gnlProkkaFHBFGMDF_164 (original name was: gnl|Prokka|FHBFGMDF_164); gnlProkkaFHBFGMDF_165 (original name was: gnl|Prokka|FHBFGMDF_165); gnlProkkaFHBFGMDF_166 (original name was: gnl|Prokka|FHBFGMDF_166); gnlProkkaFHBFGMDF_167 (original name was: gnl|Prokka|FHBFGMDF_167); gnlProkkaFHBFGMDF_168 (original name was: gnl|Prokka|FHBFGMDF_168); gnlProkkaFHBFGMDF_169 (original name was: gnl|Prokka|FHBFGMDF_169); gnlProkkaFHBFGMDF_170 (original name was: gnl|Prokka|FHBFGMDF_170); gnlProkkaFHBFGMDF_171 (original name was: gnl|Prokka|FHBFGMDF_171); gnlProkkaFHBFGMDF_172 (original name was: gnl|Prokka|FHBFGMDF_172); gnlProkkaFHBFGMDF_173 (original name was: gnl|Prokka|FHBFGMDF_173); gnlProkkaFHBFGMDF_174 (original name was: gnl|Prokka|FHBFGMDF_174); gnlProkkaFHBFGMDF_175 (original name was: gnl|Prokka|FHBFGMDF_175); gnlProkkaFHBFGMDF_176 (original name was: gnl|Prokka|FHBFGMDF_176); gnlProkkaFHBFGMDF_177 (original name was: gnl|Prokka|FHBFGMDF_177); gnlProkkaFHBFGMDF_178 (original name was: gnl|Prokka|FHBFGMDF_178); gnlProkkaFHBFGMDF_179 (original name was: gnl|Prokka|FHBFGMDF_179); gnlProkkaFHBFGMDF_180 (original name was: gnl|Prokka|FHBFGMDF_180); gnlProkkaFHBFGMDF_181 (original name was: gnl|Prokka|FHBFGMDF_181); gnlProkkaFHBFGMDF_182 (original name was: gnl|Prokka|FHBFGMDF_182); gnlProkkaFHBFGMDF_183 (original name was: gnl|Prokka|FHBFGMDF_183); gnlProkkaFHBFGMDF_184 (original name was: gnl|Prokka|FHBFGMDF_184); gnlProkkaFHBFGMDF_185 (original name was: gnl|Prokka|FHBFGMDF_185); gnlProkkaFHBFGMDF_186 (original name was: gnl|Prokka|FHBFGMDF_186); gnlProkkaFHBFGMDF_187 (original name was: gnl|Prokka|FHBFGMDF_187); gnlProkkaFHBFGMDF_188 (original name was: gnl|Prokka|FHBFGMDF_188); gnlProkkaFHBFGMDF_189 (original name was: gnl|Prokka|FHBFGMDF_189)

Compact view

gnlProkkaFHBFGMDF_6 - Region 1 - ranthipeptide

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Location: 1 - 15,492 nt. (total: 15,492 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFHBFGMDF_18 - Region 1 - NRPS

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Location: 1 - 23,987 nt. (total: 23,987 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 23987:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg18_8

AMP-binding (22..421): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLTDGGISK
Nearest Stachelhaus code(s):: Leu or Trp DVLTDGGISK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (1035..1423): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAMFSGAIFK
Nearest Stachelhaus code(s):: Leu or Trp DAMFSGAIFK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (2029..2420): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAITTGGVSK
Nearest Stachelhaus code(s):: Leu or Trp DAITTGGVSK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

gnlProkkaFHBFGMDF_89 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 9,115 nt. (total: 9,115 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.