GCA_958354245.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaALICOIMG_9 (original name was: gnl|Prokka|ALICOIMG_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	arylpolyene	99,013	146,618	flexirubin	Other	48%

gnlProkkaALICOIMG_27 (original name was: gnl|Prokka|ALICOIMG_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	RRE-containing	67,586	78,005

No secondary metabolite regions were found in these records:: gnlProkkaALICOIMG_1 (original name was: gnl|Prokka|ALICOIMG_1); gnlProkkaALICOIMG_2 (original name was: gnl|Prokka|ALICOIMG_2); gnlProkkaALICOIMG_3 (original name was: gnl|Prokka|ALICOIMG_3); gnlProkkaALICOIMG_4 (original name was: gnl|Prokka|ALICOIMG_4); gnlProkkaALICOIMG_5 (original name was: gnl|Prokka|ALICOIMG_5); gnlProkkaALICOIMG_6 (original name was: gnl|Prokka|ALICOIMG_6); gnlProkkaALICOIMG_7 (original name was: gnl|Prokka|ALICOIMG_7); gnlProkkaALICOIMG_8 (original name was: gnl|Prokka|ALICOIMG_8); gnlProkkaALICOIMG_10 (original name was: gnl|Prokka|ALICOIMG_10); gnlProkkaALICOIMG_11 (original name was: gnl|Prokka|ALICOIMG_11); gnlProkkaALICOIMG_12 (original name was: gnl|Prokka|ALICOIMG_12); gnlProkkaALICOIMG_13 (original name was: gnl|Prokka|ALICOIMG_13); gnlProkkaALICOIMG_14 (original name was: gnl|Prokka|ALICOIMG_14); gnlProkkaALICOIMG_15 (original name was: gnl|Prokka|ALICOIMG_15); gnlProkkaALICOIMG_16 (original name was: gnl|Prokka|ALICOIMG_16); gnlProkkaALICOIMG_17 (original name was: gnl|Prokka|ALICOIMG_17); gnlProkkaALICOIMG_18 (original name was: gnl|Prokka|ALICOIMG_18); gnlProkkaALICOIMG_19 (original name was: gnl|Prokka|ALICOIMG_19); gnlProkkaALICOIMG_20 (original name was: gnl|Prokka|ALICOIMG_20); gnlProkkaALICOIMG_21 (original name was: gnl|Prokka|ALICOIMG_21); gnlProkkaALICOIMG_22 (original name was: gnl|Prokka|ALICOIMG_22); gnlProkkaALICOIMG_23 (original name was: gnl|Prokka|ALICOIMG_23); gnlProkkaALICOIMG_24 (original name was: gnl|Prokka|ALICOIMG_24); gnlProkkaALICOIMG_25 (original name was: gnl|Prokka|ALICOIMG_25); gnlProkkaALICOIMG_26 (original name was: gnl|Prokka|ALICOIMG_26); gnlProkkaALICOIMG_28 (original name was: gnl|Prokka|ALICOIMG_28); gnlProkkaALICOIMG_29 (original name was: gnl|Prokka|ALICOIMG_29); gnlProkkaALICOIMG_30 (original name was: gnl|Prokka|ALICOIMG_30); gnlProkkaALICOIMG_31 (original name was: gnl|Prokka|ALICOIMG_31); gnlProkkaALICOIMG_32 (original name was: gnl|Prokka|ALICOIMG_32); gnlProkkaALICOIMG_33 (original name was: gnl|Prokka|ALICOIMG_33); gnlProkkaALICOIMG_34 (original name was: gnl|Prokka|ALICOIMG_34); gnlProkkaALICOIMG_35 (original name was: gnl|Prokka|ALICOIMG_35); gnlProkkaALICOIMG_36 (original name was: gnl|Prokka|ALICOIMG_36); gnlProkkaALICOIMG_37 (original name was: gnl|Prokka|ALICOIMG_37); gnlProkkaALICOIMG_38 (original name was: gnl|Prokka|ALICOIMG_38); gnlProkkaALICOIMG_39 (original name was: gnl|Prokka|ALICOIMG_39); gnlProkkaALICOIMG_40 (original name was: gnl|Prokka|ALICOIMG_40); gnlProkkaALICOIMG_41 (original name was: gnl|Prokka|ALICOIMG_41); gnlProkkaALICOIMG_42 (original name was: gnl|Prokka|ALICOIMG_42); gnlProkkaALICOIMG_43 (original name was: gnl|Prokka|ALICOIMG_43); gnlProkkaALICOIMG_44 (original name was: gnl|Prokka|ALICOIMG_44); gnlProkkaALICOIMG_45 (original name was: gnl|Prokka|ALICOIMG_45); gnlProkkaALICOIMG_46 (original name was: gnl|Prokka|ALICOIMG_46); gnlProkkaALICOIMG_47 (original name was: gnl|Prokka|ALICOIMG_47); gnlProkkaALICOIMG_48 (original name was: gnl|Prokka|ALICOIMG_48); gnlProkkaALICOIMG_49 (original name was: gnl|Prokka|ALICOIMG_49); gnlProkkaALICOIMG_50 (original name was: gnl|Prokka|ALICOIMG_50); gnlProkkaALICOIMG_51 (original name was: gnl|Prokka|ALICOIMG_51); gnlProkkaALICOIMG_52 (original name was: gnl|Prokka|ALICOIMG_52)

Compact view

gnlProkkaALICOIMG_9 - Region 1 - arylpolyene

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Location: 99,013 - 146,618 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg9_85

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaALICOIMG_27 - Region 1 - RRE-containing

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Location: 67,586 - 78,005 nt. (total: 10,420 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.