GCA_958367705.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPMJAFBCC_1 (original name was: gnl|Prokka|PMJAFBCC_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	7,633	29,404

No secondary metabolite regions were found in these records:: gnlProkkaPMJAFBCC_2 (original name was: gnl|Prokka|PMJAFBCC_2); gnlProkkaPMJAFBCC_3 (original name was: gnl|Prokka|PMJAFBCC_3); gnlProkkaPMJAFBCC_4 (original name was: gnl|Prokka|PMJAFBCC_4); gnlProkkaPMJAFBCC_5 (original name was: gnl|Prokka|PMJAFBCC_5); gnlProkkaPMJAFBCC_6 (original name was: gnl|Prokka|PMJAFBCC_6); gnlProkkaPMJAFBCC_7 (original name was: gnl|Prokka|PMJAFBCC_7); gnlProkkaPMJAFBCC_8 (original name was: gnl|Prokka|PMJAFBCC_8); gnlProkkaPMJAFBCC_9 (original name was: gnl|Prokka|PMJAFBCC_9); gnlProkkaPMJAFBCC_10 (original name was: gnl|Prokka|PMJAFBCC_10); gnlProkkaPMJAFBCC_11 (original name was: gnl|Prokka|PMJAFBCC_11); gnlProkkaPMJAFBCC_12 (original name was: gnl|Prokka|PMJAFBCC_12); gnlProkkaPMJAFBCC_13 (original name was: gnl|Prokka|PMJAFBCC_13); gnlProkkaPMJAFBCC_14 (original name was: gnl|Prokka|PMJAFBCC_14); gnlProkkaPMJAFBCC_15 (original name was: gnl|Prokka|PMJAFBCC_15); gnlProkkaPMJAFBCC_16 (original name was: gnl|Prokka|PMJAFBCC_16); gnlProkkaPMJAFBCC_17 (original name was: gnl|Prokka|PMJAFBCC_17); gnlProkkaPMJAFBCC_18 (original name was: gnl|Prokka|PMJAFBCC_18); gnlProkkaPMJAFBCC_19 (original name was: gnl|Prokka|PMJAFBCC_19); gnlProkkaPMJAFBCC_20 (original name was: gnl|Prokka|PMJAFBCC_20); gnlProkkaPMJAFBCC_21 (original name was: gnl|Prokka|PMJAFBCC_21); gnlProkkaPMJAFBCC_22 (original name was: gnl|Prokka|PMJAFBCC_22); gnlProkkaPMJAFBCC_23 (original name was: gnl|Prokka|PMJAFBCC_23); gnlProkkaPMJAFBCC_24 (original name was: gnl|Prokka|PMJAFBCC_24); gnlProkkaPMJAFBCC_25 (original name was: gnl|Prokka|PMJAFBCC_25); gnlProkkaPMJAFBCC_26 (original name was: gnl|Prokka|PMJAFBCC_26); gnlProkkaPMJAFBCC_27 (original name was: gnl|Prokka|PMJAFBCC_27); gnlProkkaPMJAFBCC_28 (original name was: gnl|Prokka|PMJAFBCC_28); gnlProkkaPMJAFBCC_29 (original name was: gnl|Prokka|PMJAFBCC_29); gnlProkkaPMJAFBCC_30 (original name was: gnl|Prokka|PMJAFBCC_30); gnlProkkaPMJAFBCC_31 (original name was: gnl|Prokka|PMJAFBCC_31); gnlProkkaPMJAFBCC_32 (original name was: gnl|Prokka|PMJAFBCC_32); gnlProkkaPMJAFBCC_33 (original name was: gnl|Prokka|PMJAFBCC_33); gnlProkkaPMJAFBCC_34 (original name was: gnl|Prokka|PMJAFBCC_34); gnlProkkaPMJAFBCC_35 (original name was: gnl|Prokka|PMJAFBCC_35); gnlProkkaPMJAFBCC_36 (original name was: gnl|Prokka|PMJAFBCC_36); gnlProkkaPMJAFBCC_37 (original name was: gnl|Prokka|PMJAFBCC_37); gnlProkkaPMJAFBCC_38 (original name was: gnl|Prokka|PMJAFBCC_38); gnlProkkaPMJAFBCC_39 (original name was: gnl|Prokka|PMJAFBCC_39); gnlProkkaPMJAFBCC_40 (original name was: gnl|Prokka|PMJAFBCC_40); gnlProkkaPMJAFBCC_41 (original name was: gnl|Prokka|PMJAFBCC_41); gnlProkkaPMJAFBCC_42 (original name was: gnl|Prokka|PMJAFBCC_42); gnlProkkaPMJAFBCC_43 (original name was: gnl|Prokka|PMJAFBCC_43); gnlProkkaPMJAFBCC_44 (original name was: gnl|Prokka|PMJAFBCC_44); gnlProkkaPMJAFBCC_45 (original name was: gnl|Prokka|PMJAFBCC_45); gnlProkkaPMJAFBCC_46 (original name was: gnl|Prokka|PMJAFBCC_46); gnlProkkaPMJAFBCC_47 (original name was: gnl|Prokka|PMJAFBCC_47); gnlProkkaPMJAFBCC_48 (original name was: gnl|Prokka|PMJAFBCC_48); gnlProkkaPMJAFBCC_49 (original name was: gnl|Prokka|PMJAFBCC_49); gnlProkkaPMJAFBCC_50 (original name was: gnl|Prokka|PMJAFBCC_50); gnlProkkaPMJAFBCC_51 (original name was: gnl|Prokka|PMJAFBCC_51); gnlProkkaPMJAFBCC_52 (original name was: gnl|Prokka|PMJAFBCC_52); gnlProkkaPMJAFBCC_53 (original name was: gnl|Prokka|PMJAFBCC_53); gnlProkkaPMJAFBCC_54 (original name was: gnl|Prokka|PMJAFBCC_54); gnlProkkaPMJAFBCC_55 (original name was: gnl|Prokka|PMJAFBCC_55); gnlProkkaPMJAFBCC_56 (original name was: gnl|Prokka|PMJAFBCC_56); gnlProkkaPMJAFBCC_57 (original name was: gnl|Prokka|PMJAFBCC_57); gnlProkkaPMJAFBCC_58 (original name was: gnl|Prokka|PMJAFBCC_58); gnlProkkaPMJAFBCC_59 (original name was: gnl|Prokka|PMJAFBCC_59); gnlProkkaPMJAFBCC_60 (original name was: gnl|Prokka|PMJAFBCC_60); gnlProkkaPMJAFBCC_61 (original name was: gnl|Prokka|PMJAFBCC_61); gnlProkkaPMJAFBCC_62 (original name was: gnl|Prokka|PMJAFBCC_62); gnlProkkaPMJAFBCC_63 (original name was: gnl|Prokka|PMJAFBCC_63); gnlProkkaPMJAFBCC_64 (original name was: gnl|Prokka|PMJAFBCC_64); gnlProkkaPMJAFBCC_65 (original name was: gnl|Prokka|PMJAFBCC_65); gnlProkkaPMJAFBCC_66 (original name was: gnl|Prokka|PMJAFBCC_66); gnlProkkaPMJAFBCC_67 (original name was: gnl|Prokka|PMJAFBCC_67); gnlProkkaPMJAFBCC_68 (original name was: gnl|Prokka|PMJAFBCC_68); gnlProkkaPMJAFBCC_69 (original name was: gnl|Prokka|PMJAFBCC_69); gnlProkkaPMJAFBCC_70 (original name was: gnl|Prokka|PMJAFBCC_70); gnlProkkaPMJAFBCC_71 (original name was: gnl|Prokka|PMJAFBCC_71); gnlProkkaPMJAFBCC_72 (original name was: gnl|Prokka|PMJAFBCC_72); gnlProkkaPMJAFBCC_73 (original name was: gnl|Prokka|PMJAFBCC_73); gnlProkkaPMJAFBCC_74 (original name was: gnl|Prokka|PMJAFBCC_74)

Compact view

gnlProkkaPMJAFBCC_1 - Region 1 - ranthipeptide

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Location: 7,633 - 29,404 nt. (total: 21,772 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.