GCA_958402745.1 - 5 region(s)

Identified primary metabolite regions

c00006_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_6)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 6.1	Putrescine2spermidine	Aliphatic_amine	32,327	55,505	Putrescine2spermidine E. rectale	SPRM	100%

c00017_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_17)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Rnf_complex	E-MGC	12,789	35,363	Acetyl-CoA pathway B. hydrogenotrophica	Acetate	14%

c00022_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_22)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 22.1	Others_HGD_unassigned	Putative	15,617	28,017

c00081_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_81)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 81.1	Others_HGD_unassigned	Putative	1	9,875

c00130_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_130)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 130.1	succinate2propionate	SCFA	1	4,288	Succinate to propionate B. theta	PRO	33%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_1); c00002_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_2); c00003_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_3); c00004_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_4); c00005_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_5); c00007_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_7); c00008_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_8); c00009_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_9); c00010_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_10); c00011_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_11); c00012_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_12); c00013_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_13); c00014_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_14); c00015_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_15); c00016_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_16); c00018_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_18); c00019_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_19); c00020_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_20); c00021_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_21); c00023_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_23); c00024_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_24); c00025_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_25); c00026_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_26); c00027_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_27); c00028_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_28); c00029_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_29); c00030_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_30); c00031_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_31); c00032_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_32); c00033_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_33); c00034_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_34); c00035_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_35); c00036_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_36); c00037_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_37); c00038_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_38); c00039_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_39); c00040_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_40); c00041_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_41); c00042_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_42); c00043_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_43); c00044_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_44); c00045_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_45); c00046_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_46); c00047_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_47); c00048_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_48); c00049_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_49); c00050_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_50); c00051_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_51); c00052_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_52); c00053_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_53); c00054_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_54); c00055_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_55); c00056_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_56); c00057_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_57); c00058_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_58); c00059_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_59); c00060_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_60); c00061_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_61); c00062_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_62); c00063_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_63); c00064_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_64); c00065_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_65); c00066_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_66); c00067_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_67); c00068_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_68); c00069_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_69); c00070_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_70); c00071_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_71); c00072_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_72); c00073_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_73); c00074_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_74); c00075_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_75); c00076_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_76); c00077_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_77); c00078_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_78); c00079_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_79); c00080_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_80); c00082_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_82); c00083_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_83); c00084_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_84); c00085_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_85); c00086_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_86); c00087_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_87); c00088_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_88); c00089_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_89); c00090_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_90); c00091_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_91); c00092_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_92); c00093_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_93); c00094_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_94); c00095_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_95); c00096_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_96); c00097_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_97); c00098_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_98); c00099_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_99); c00100_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_100); c00101_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_101); c00102_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_102); c00103_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_103); c00104_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_104); c00105_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_105); c00106_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_106); c00107_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_107); c00108_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_108); c00109_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_109); c00110_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_110); c00111_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_111); c00112_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_112); c00113_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_113); c00114_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_114); c00115_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_115); c00116_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_116); c00117_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_117); c00118_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_118); c00119_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_119); c00120_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_120); c00121_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_121); c00122_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_122); c00123_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_123); c00124_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_124); c00125_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_125); c00126_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_126); c00127_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_127); c00128_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_128); c00129_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_129); c00131_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_131); c00132_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_132); c00133_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_133); c00134_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_134); c00135_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_135); c00136_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_136); c00137_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_137); c00138_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_138); c00139_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_139); c00140_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_140); c00141_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_141); c00142_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_142); c00143_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_143); c00144_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_144); c00145_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_145); c00146_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_146); c00147_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_147); c00148_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_148); c00149_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_149); c00150_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_150); c00151_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_151); c00152_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_152); c00153_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_153); c00154_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_154); c00155_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_155); c00156_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_156); c00157_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_157); c00158_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_158); c00159_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_159); c00160_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_160); c00161_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_161); c00162_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_162); c00163_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_163); c00164_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_164); c00165_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_165); c00166_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_166); c00167_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_167); c00168_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_168); c00169_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_169); c00170_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_170); c00171_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_171); c00172_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_172); c00173_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_173); c00174_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_174); c00175_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_175); c00176_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_176); c00177_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_177); c00178_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_178); c00179_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_179); c00180_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_180); c00181_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_181); c00182_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_182); c00183_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_183); c00184_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_184); c00185_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_185); c00186_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_186); c00187_gnlPro.. (original name was: gnl|Prokka|ABAJLLLP_187)

Compact view

c00006_gnlPro.. - Region 1 - Putrescine2spermidine

Download region GenBank file

Location: 32,327 - 55,505 nt. (total: 23,179 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00017_gnlPro.. - Region 1 - Rnf_complex

Download region GenBank file

Location: 12,789 - 35,363 nt. (total: 22,575 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00022_gnlPro.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 15,617 - 28,017 nt. (total: 12,401 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00081_gnlPro.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 1 - 9,875 nt. (total: 9,875 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00130_gnlPro.. - Region 1 - succinate2propionate

Download region GenBank file

Location: 1 - 4,288 nt. (total: 4,288 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters